RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 DPP7Q9UHL4 492 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 CPQQ9Y646 472 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 EEF2KO00418 725 aaKnown RBP9.69□□□□□ -0.86
SDCBP-212ENST00000523483 AMPD1P23109 780 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 KCNJ1P48048 391 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 VPS41P49754 854 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 SLC5A9Q2M3M2 681 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 RAP1GAP2Q684P5 730 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 PDE12Q6L8Q7 609 aaKnown RBP9.69□□□□□ -0.86
SDCBP-212ENST00000523483 TADA2BQ86TJ2 420 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 NOA1Q8NC60 698 aaKnown RBP9.69□□□□□ -0.86
SDCBP-212ENST00000523483 SPATA4Q8NEY3 305 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 FCRL2Q96LA5 508 aaPredicted RBP9.69□□□□□ -0.86
SDCBP-212ENST00000523483 KCTD15Q96SI1 283 aaPredicted RBP9.69□□□□□ -0.86
SDCBP-212ENST00000523483 TTLL2Q9BWV7 592 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 TRIM31Q9BZY9 425 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 NSUN3Q9H649 340 aaKnown RBP9.69□□□□□ -0.86
SDCBP-212ENST00000523483 OLA1Q9NTK5 396 aaKnown RBP9.69□□□□□ -0.86
SDCBP-212ENST00000523483 RRN3Q9NYV6 651 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 STIM2Q9P246 746 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 SLC12A6Q9UHW9 1150 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 I6L893 689 aaPredicted RBP9.68□□□□□ -0.86
SDCBP-212ENST00000523483 TSPAN3O60637 253 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 RFWD3Q6PCD5 774 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 NPNTQ6UXI9 565 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 Q7L0L9 218 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 GPR65Q8IYL9 337 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.68□□□□□ -0.86
SDCBP-212ENST00000523483 VN1R2Q8NFZ6 395 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 MAGOHBQ96A72 148 aaKnown RBP9.68□□□□□ -0.86
SDCBP-212ENST00000523483 PCDH18Q9HCL0 1135 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 MPP6Q9NZW5 540 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 HSFX1Q9UBD0 423 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 ASB3Q9Y575 518 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 PTPRDP23468 1912 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 A0A0C4DFX4 3053 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 GOLGA6L7A0A1B0GV03 622 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 IFNB1P01574 187 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 CDC25CP30307 473 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 DPYSL3Q14195 570 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 DUSP6Q16828 381 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 GSTA5Q7RTV2 222 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 POLNQ7Z5Q5 900 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 TMEM150AQ86TG1 271 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 CIR1Q86X95 450 aaPredicted RBP9.68□□□□□ -0.86
SDCBP-212ENST00000523483 CCDC105Q8IYK2 499 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 CFAP52Q8N1V2 620 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 UBXN4Q92575 508 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 CENPIQ92674 756 aaPredicted RBP9.68□□□□□ -0.86
SDCBP-212ENST00000523483 RPRD1AQ96P16 312 aaPredicted RBP9.68□□□□□ -0.86
SDCBP-212ENST00000523483 NAP1L3Q99457 506 aaPredicted RBP9.68□□□□□ -0.86
SDCBP-212ENST00000523483 TTYH1Q9H313 450 aaPredicted RBP9.68□□□□□ -0.86
SDCBP-212ENST00000523483 IL21Q9HBE4 155 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.68□□□□□ -0.86
SDCBP-212ENST00000523483 MFHAS1Q9Y4C4 1052 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 MYO16Q9Y6X6 1858 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 FAM92AA1XBS5 289 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 SOX1O00570 391 aaPredicted RBP9.68□□□□□ -0.86
SDCBP-212ENST00000523483 TJP3O95049 919 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 F11P03951 625 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 CORO1AP31146 461 aaKnown RBP9.68□□□□□ -0.86
SDCBP-212ENST00000523483 SLC7A5Q01650 507 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 TRIP13Q15645 432 aaPredicted RBP9.68□□□□□ -0.86
SDCBP-212ENST00000523483 LRRC38Q5VT99 294 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 CYP4V2Q6ZWL3 525 aaPredicted RBP9.68□□□□□ -0.86
SDCBP-212ENST00000523483 ARCQ7LC44 396 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 ITFG1Q8TB96 612 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 NT5C3BQ969T7 300 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 MYRFLQ96LU7 910 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 EPAS1Q99814 870 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 NCAPGQ9BPX3 1015 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 PRKD2Q9BZL6 878 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 IL37Q9NZH6 218 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 CWC15Q9P013 229 aaKnown RBP9.68□□□□□ -0.86
SDCBP-212ENST00000523483 FZD10Q9ULW2 581 aa9.68□□□□□ -0.86
SDCBP-212ENST00000523483 COL6A3P12111 3177 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 LRIG2O94898 1065 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 PRLRP16471 622 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 CDKN2BP42772 138 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 CXCR3P49682 368 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 COG7P83436 770 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 HYAL1Q12794 435 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 ERCC6LQ2NKX8 1250 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 ARHGAP15Q53QZ3 475 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 TRMT2BQ96GJ1 504 aaKnown RBP9.67□□□□□ -0.86
SDCBP-212ENST00000523483 CELF6Q96J87 481 aaKnown RBP9.67□□□□□ -0.86
SDCBP-212ENST00000523483 L2HGDHQ9H9P8 463 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 PLK2Q9NYY3 685 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 AMACRQ9UHK6 382 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 TLR6Q9Y2C9 796 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 R3HDM2Q9Y2K5 976 aaKnown RBP9.67□□□□□ -0.86
SDCBP-212ENST00000523483 SH3BP1Q9Y3L3 701 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 ZNF638Q14966 1978 aaKnown RBP9.67□□□□□ -0.86
SDCBP-212ENST00000523483 hCG_1818297A0A087WSY0 165 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 TRAV19A0A0A6YYK7 116 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 H3BQ06 376 aaPredicted RBP9.67□□□□□ -0.86
SDCBP-212ENST00000523483 L1CAMP32004 1257 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 DLX2Q07687 328 aaPredicted RBP9.67□□□□□ -0.86
SDCBP-212ENST00000523483 CCNYQ8ND76 341 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 SHKBP1Q8TBC3 707 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms