RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 ERBB2P04626 1255 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 FAM83EQ2M2I3 478 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 ANKRD20A4Q4UJ75 823 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 ANKRD20A2Q5SQ80 823 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 ANKRD20A1Q5TYW2 823 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 RASIP1Q5U651 963 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 SZRD1Q7Z422 152 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 LRRC19Q9H756 370 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 STOML1Q9UBI4 398 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 GOLGA8TH3BQL2 631 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 DUSP11O75319 330 aaKnown RBP13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 ANP32DO95626 131 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 ESRRBO95718 433 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 HIST1H2AGP0C0S8 130 aaPredicted RBP13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 ENO3P13929 434 aaPredicted RBP13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 HIST1H2ADP20671 130 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 FLT3P36888 993 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 RHOAP61586 193 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 CCL14Q16627 93 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 HSP90AA5PQ58FG0 334 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 ZCCHC9Q8N567 271 aaKnown RBP13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 HIST1H2AHQ96KK5 128 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 HIST1H2AJQ99878 128 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 H2AFJQ9BTM1 129 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 IRAK4Q9NWZ3 460 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 PCDHB8Q9UN66 801 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 CILPO75339 1184 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 LCA5LO95447 670 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 POLD3Q15054 466 aaPredicted RBP13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 LGI2Q8N0V4 545 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 PADI3Q9ULW8 664 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 MYO9BQ13459 2157 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 C2orf81A6NN90 581 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 B2RBV5 119 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 SHBGP04278 402 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 GOT1P17174 413 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 SLC10A6Q3KNW5 377 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 NUDT18Q6ZVK8 323 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 PTAR1Q7Z6K3 402 aaPredicted RBP13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 FAM35AQ86V20 835 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 LCA5Q86VQ0 697 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 MAF1Q9H063 256 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 PRDM12Q9H4Q4 367 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 NRDE2Q9H7Z3 1164 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 CYP4F12Q9HCS2 524 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 KLC4Q9NSK0 619 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 ZNF112Q9UJU3 913 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 GIT1Q9Y2X7 761 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 MTO1Q9Y2Z2 717 aaKnown RBP13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 ZMYM2Q9UBW7 1377 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 TCRBV7S2A1N4TA0A589 114 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 DUPD1Q68J44 220 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 UNC45BQ8IWX7 931 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 PARP9Q8IXQ6 854 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 DTX3LQ8TDB6 740 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 TFAP2BQ92481 460 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 DEFB118Q96PH6 123 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 CD248Q9HCU0 757 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 ATP13A1Q9HD20 1204 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 TTLL13PA6NNM8 815 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 PEX19P40855 299 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 RGS4P49798 205 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 RENBPP51606 427 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 ARHGAP1Q07960 439 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 CDH17Q12864 832 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 KCNA10Q16322 511 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 SLC45A4Q5BKX6 768 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 PLEKHA7Q6IQ23 1121 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 KRT80Q6KB66 452 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 TMEM192Q8IY95 271 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 R3HDM2Q9Y2K5 976 aaKnown RBP13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 SLC27A5Q9Y2P5 690 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 CDY1Q9Y6F8 540 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 C4BP0C0L5 1744 aa13.43□□□□□ -0.26
PCDHGB1-201ENST00000523390 AIM2O14862 343 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 SKAP2O75563 359 aaPredicted RBP13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 SUPT7LO94864 414 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 STMN1P16949 149 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 BGNP21810 368 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 PTPN7P35236 360 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 CRADDP78560 199 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 HS6ST3Q8IZP7 471 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 PIP4K2CQ8TBX8 421 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 CD99L2Q8TCZ2 262 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 MTBPQ96DY7 904 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 TMA16Q96EY4 203 aaKnown RBP13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 ABCC13Q9NSE7 274 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 NOCTQ9UK39 431 aaKnown RBP13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 ADGRA2Q96PE1 1338 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 BANF1O75531 89 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 SERPINF2P08697 491 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 RPL9P32969 192 aaKnown RBP13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 SERPINB8P50452 374 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 RAD23BP54727 409 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 SATB1Q01826 763 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 SLC20A2Q08357 652 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 PLD1Q13393 1074 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 IKBKEQ14164 716 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 CAPRIN1Q14444 709 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms