RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 KIAA1211LQ6NV74 962 aa16.9■□□□□ 0.3
CLN8-206ENST00000523237 SHC3Q92529 594 aa16.9■□□□□ 0.3
CLN8-206ENST00000523237 TMA16Q96EY4 203 aaKnown RBP16.9■□□□□ 0.3
CLN8-206ENST00000523237 SERPINB11Q96P15 392 aa16.9■□□□□ 0.3
CLN8-206ENST00000523237 TUBGCP2Q9BSJ2 902 aa16.9■□□□□ 0.3
CLN8-206ENST00000523237 SLC4A5Q9BY07 1137 aa16.9■□□□□ 0.3
CLN8-206ENST00000523237 IRX2Q9BZI1 471 aaPredicted RBP16.9■□□□□ 0.3
CLN8-206ENST00000523237 NDST4Q9H3R1 872 aa16.9■□□□□ 0.3
CLN8-206ENST00000523237 CD248Q9HCU0 757 aa16.9■□□□□ 0.3
CLN8-206ENST00000523237 ACP6Q9NPH0 428 aa16.9■□□□□ 0.3
CLN8-206ENST00000523237 LMBRD1Q9NUN5 540 aa16.9■□□□□ 0.3
CLN8-206ENST00000523237 ELOVL2Q9NXB9 296 aa16.9■□□□□ 0.3
CLN8-206ENST00000523237 CALCOCO1Q9P1Z2 691 aa16.9■□□□□ 0.3
CLN8-206ENST00000523237 THAP10Q9P2Z0 257 aaPredicted RBP16.9■□□□□ 0.3
CLN8-206ENST00000523237 CLEC4EQ9ULY5 219 aa16.9■□□□□ 0.3
CLN8-206ENST00000523237 RAD54BQ9Y620 910 aa16.9■□□□□ 0.3
CLN8-206ENST00000523237 STON1Q9Y6Q2 735 aa16.9■□□□□ 0.3
CLN8-206ENST00000523237 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.89■□□□□ 0.29
CLN8-206ENST00000523237 MED19A0JLT2 244 aaPredicted RBP16.89■□□□□ 0.29
CLN8-206ENST00000523237 DCDC2BA2VCK2 349 aa16.89■□□□□ 0.29
CLN8-206ENST00000523237 WASH3PC4AMC7 463 aa16.89■□□□□ 0.29
CLN8-206ENST00000523237 E5RJQ4 531 aa16.89■□□□□ 0.29
CLN8-206ENST00000523237 IRAK2O43187 625 aa16.89■□□□□ 0.29
CLN8-206ENST00000523237 AP5Z1O43299 807 aa16.89■□□□□ 0.29
CLN8-206ENST00000523237 TIMM44O43615 452 aa16.89■□□□□ 0.29
CLN8-206ENST00000523237 ZNF217O75362 1048 aa16.89■□□□□ 0.29
CLN8-206ENST00000523237 FYNP06241 537 aa16.89■□□□□ 0.29
CLN8-206ENST00000523237 PRKCSHP14314 528 aaPredicted RBP16.89■□□□□ 0.29
CLN8-206ENST00000523237 NDUFV2P19404 249 aa16.89■□□□□ 0.29
CLN8-206ENST00000523237 ARID5AQ03989 594 aa16.89■□□□□ 0.29
CLN8-206ENST00000523237 NNTQ13423 1086 aa16.89■□□□□ 0.29
CLN8-206ENST00000523237 STARD3Q14849 445 aa16.89■□□□□ 0.29
CLN8-206ENST00000523237 VWA3BQ502W6 1294 aa16.89■□□□□ 0.29
CLN8-206ENST00000523237 CT47A1Q5JQC4 288 aaPredicted RBP16.89■□□□□ 0.29
CLN8-206ENST00000523237 SLC36A4Q6YBV0 504 aa16.89■□□□□ 0.29
CLN8-206ENST00000523237 BEND5Q7L4P6 421 aa16.89■□□□□ 0.29
CLN8-206ENST00000523237 TMEM110Q86TL2 294 aa16.89■□□□□ 0.29
CLN8-206ENST00000523237 TMEFF1Q8IYR6 380 aa16.89■□□□□ 0.29
CLN8-206ENST00000523237 FRMD1Q8N878 549 aa16.89■□□□□ 0.29
CLN8-206ENST00000523237 DQX1Q8TE96 717 aaKnown RBP16.89■□□□□ 0.29
CLN8-206ENST00000523237 CIPCQ9C0C6 399 aa16.89■□□□□ 0.29
CLN8-206ENST00000523237 MBD1Q9UIS9 605 aaPredicted RBP16.89■□□□□ 0.29
CLN8-206ENST00000523237 TLR6Q9Y2C9 796 aa16.89■□□□□ 0.29
CLN8-206ENST00000523237 CAPN9O14815 690 aa16.88■□□□□ 0.29
CLN8-206ENST00000523237 ACSL4O60488 711 aa16.88■□□□□ 0.29
CLN8-206ENST00000523237 IL12RB1P42701 662 aa16.88■□□□□ 0.29
CLN8-206ENST00000523237 PTK2Q05397 1052 aa16.88■□□□□ 0.29
CLN8-206ENST00000523237 PDCLQ13371 301 aa16.88■□□□□ 0.29
CLN8-206ENST00000523237 ENPP2Q13822 863 aa16.88■□□□□ 0.29
CLN8-206ENST00000523237 HSP90AA4PQ58FG1 418 aa16.88■□□□□ 0.29
CLN8-206ENST00000523237 MPP7Q5T2T1 576 aa16.88■□□□□ 0.29
CLN8-206ENST00000523237 PIK3R6Q5UE93 754 aa16.88■□□□□ 0.29
CLN8-206ENST00000523237 IL31Q6EBC2 164 aa16.88■□□□□ 0.29
CLN8-206ENST00000523237 TCEAL6Q6IPX3 200 aa16.88■□□□□ 0.29
CLN8-206ENST00000523237 WFIKKN2Q8TEU8 576 aa16.88■□□□□ 0.29
CLN8-206ENST00000523237 DDX1Q92499 740 aaKnown RBP16.88■□□□□ 0.29
CLN8-206ENST00000523237 TCEAL3Q969E4 200 aa16.88■□□□□ 0.29
CLN8-206ENST00000523237 AZIN2Q96A70 460 aa16.88■□□□□ 0.29
CLN8-206ENST00000523237 ERLEC1Q96DZ1 483 aa16.88■□□□□ 0.29
CLN8-206ENST00000523237 GBP4Q96PP9 640 aa16.88■□□□□ 0.29
CLN8-206ENST00000523237 DDX50Q9BQ39 737 aaKnown RBP16.88■□□□□ 0.29
CLN8-206ENST00000523237 POPDC2Q9HBU9 364 aa16.88■□□□□ 0.29
CLN8-206ENST00000523237 SIX2Q9NPC8 291 aa16.88■□□□□ 0.29
CLN8-206ENST00000523237 RXFP3Q9NSD7 469 aa16.88■□□□□ 0.29
CLN8-206ENST00000523237 CYTH4Q9UIA0 394 aa16.88■□□□□ 0.29
CLN8-206ENST00000523237 DNAJC12Q9UKB3 198 aa16.88■□□□□ 0.29
CLN8-206ENST00000523237 NAALADL1Q9UQQ1 740 aa16.88■□□□□ 0.29
CLN8-206ENST00000523237 CKAP5Q14008 2032 aa16.87■□□□□ 0.29
CLN8-206ENST00000523237 DNAH14Q0VDD8 3507 aa16.87■□□□□ 0.29
CLN8-206ENST00000523237 KCNJ18B7U540 433 aa16.87■□□□□ 0.29
CLN8-206ENST00000523237 KHNYNO15037 678 aaKnown RBP16.87■□□□□ 0.29
CLN8-206ENST00000523237 PAPSS1O43252 624 aaPredicted RBP16.87■□□□□ 0.29
CLN8-206ENST00000523237 SYNCRIPO60506 623 aaKnown RBP16.87■□□□□ 0.29
CLN8-206ENST00000523237 HLA-FP30511 346 aa16.87■□□□□ 0.29
CLN8-206ENST00000523237 DPP6P42658 865 aa16.87■□□□□ 0.29
CLN8-206ENST00000523237 YWHAZP63104 245 aaKnown RBP16.87■□□□□ 0.29
CLN8-206ENST00000523237 RPL6Q02878 288 aaKnown RBP16.87■□□□□ 0.29
CLN8-206ENST00000523237 KCNJ12Q14500 433 aa16.87■□□□□ 0.29
CLN8-206ENST00000523237 ZNF234Q14588 700 aa16.87■□□□□ 0.29
CLN8-206ENST00000523237 FAM133BQ5BKY9 247 aaKnown RBP16.87■□□□□ 0.29
CLN8-206ENST00000523237 MIIPQ5JXC2 388 aa16.87■□□□□ 0.29
CLN8-206ENST00000523237 STPG1Q5TH74 334 aa16.87■□□□□ 0.29
CLN8-206ENST00000523237 RFWD3Q6PCD5 774 aa16.87■□□□□ 0.29
CLN8-206ENST00000523237 ARMCX6Q7L4S7 300 aa16.87■□□□□ 0.29
CLN8-206ENST00000523237 PIGKQ92643 395 aa16.87■□□□□ 0.29
CLN8-206ENST00000523237 FCRL2Q96LA5 508 aaPredicted RBP16.87■□□□□ 0.29
CLN8-206ENST00000523237 MRGPRX1Q96LB2 322 aa16.87■□□□□ 0.29
CLN8-206ENST00000523237 EDEM2Q9BV94 578 aa16.87■□□□□ 0.29
CLN8-206ENST00000523237 PCDHGC3Q9UN70 934 aa16.87■□□□□ 0.29
CLN8-206ENST00000523237 IGHV1OR15-9A0A0B4J2B8 117 aa16.86■□□□□ 0.29
CLN8-206ENST00000523237 GOLGA6L7A0A1B0GV03 622 aa16.86■□□□□ 0.29
CLN8-206ENST00000523237 TYW5A2RUC4 315 aaKnown RBP16.86■□□□□ 0.29
CLN8-206ENST00000523237 PES1O00541 588 aaKnown RBP16.86■□□□□ 0.29
CLN8-206ENST00000523237 TBL1XO60907 577 aa16.86■□□□□ 0.29
CLN8-206ENST00000523237 KRT9P35527 623 aa16.86■□□□□ 0.29
CLN8-206ENST00000523237 PTGER3P43115 390 aa16.86■□□□□ 0.29
CLN8-206ENST00000523237 SGSHP51688 502 aa16.86■□□□□ 0.29
CLN8-206ENST00000523237 FUT11Q495W5 492 aa16.86■□□□□ 0.29
CLN8-206ENST00000523237 SYPL2Q5VXT5 272 aa16.86■□□□□ 0.29
CLN8-206ENST00000523237 LYSMD4Q5XG99 296 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms