RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 SULF2Q8IWU5 870 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 CCDC33Q8N5R6 958 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 ARL14EPQ8N8R7 260 aaPredicted RBP6.65□□□□□ -1.34
PABPC1-220ENST00000522658 STKLD1Q8NE28 680 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 MDGA1Q8NFP4 955 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 HVCN1Q96D96 273 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 TRMT2BQ96GJ1 504 aaKnown RBP6.65□□□□□ -1.34
PABPC1-220ENST00000522658 FUBP3Q96I24 572 aaKnown RBP eCLIP6.65□□□□□ -1.34
PABPC1-220ENST00000522658 AK8Q96MA6 479 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 NACA2Q9H009 215 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 POLR3BQ9NW08 1133 aaPredicted RBP6.65□□□□□ -1.34
PABPC1-220ENST00000522658 MAGEC2Q9UBF1 373 aaPredicted RBP6.65□□□□□ -1.34
PABPC1-220ENST00000522658 GPN3Q9UHW5 284 aaPredicted RBP6.65□□□□□ -1.34
PABPC1-220ENST00000522658 CPSF3Q9UKF6 684 aaKnown RBP6.65□□□□□ -1.34
PABPC1-220ENST00000522658 AGAP1Q9UPQ3 857 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 GTF3C3Q9Y5Q9 886 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 SNX11Q9Y5W9 270 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 SNX9Q9Y5X1 595 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 MYH11P35749 1972 aa6.65□□□□□ -1.34
PABPC1-220ENST00000522658 ATP8B3O60423 1300 aa6.65□□□□□ -1.35
PABPC1-220ENST00000522658 SPAG17Q6Q759 2223 aa6.65□□□□□ -1.35
PABPC1-220ENST00000522658 TCHHQ07283 1943 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 ZNF638Q14966 1978 aaKnown RBP6.64□□□□□ -1.35
PABPC1-220ENST00000522658 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 ANO9A1A5B4 782 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 PIRO00625 290 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 MEFVO15553 781 aaPredicted RBP6.64□□□□□ -1.35
PABPC1-220ENST00000522658 NDUFS2O75306 463 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 NOL4O94818 638 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 PRPF6O94906 941 aaKnown RBP6.64□□□□□ -1.35
PABPC1-220ENST00000522658 TNNC2P02585 160 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 ITGB3P05106 788 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 MBL2P11226 248 aaPredicted RBP6.64□□□□□ -1.35
PABPC1-220ENST00000522658 GNSP15586 552 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 ENGP17813 658 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 PFKLP17858 780 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 TRIM21P19474 475 aaKnown RBP6.64□□□□□ -1.35
PABPC1-220ENST00000522658 BCKDHBP21953 392 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 ACAT1P24752 427 aaKnown RBP6.64□□□□□ -1.35
PABPC1-220ENST00000522658 CYP2F1P24903 491 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 ARNTP27540 789 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 HOXC13P31276 330 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 NTF4P34130 210 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 DDIT3P35638 169 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 GPR15P49685 360 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 IRX4P78413 519 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 ATP2C1P98194 919 aaPredicted RBP6.64□□□□□ -1.35
PABPC1-220ENST00000522658 IFRD2Q12894 506 aaPredicted RBP6.64□□□□□ -1.35
PABPC1-220ENST00000522658 ZBTB6Q15916 424 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 CRY1Q16526 586 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 DDR2Q16832 855 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 DUOXA1Q1HG43 343 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 HYIQ5T013 277 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 SYCP2LQ5T4T6 812 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 ARL6IP4Q66PJ3 421 aaKnown RBP6.64□□□□□ -1.35
PABPC1-220ENST00000522658 SLC23A3Q6PIS1 610 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 DENND5BQ6ZUT9 1274 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 STXBP4Q6ZWJ1 553 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 TMEFF1Q8IYR6 380 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 PDCL2Q8N4E4 241 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 CSGALNACT2Q8N6G5 542 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 TOP6BLQ8N6T0 577 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 TXNDC5Q8NBS9 432 aaKnown RBP6.64□□□□□ -1.35
PABPC1-220ENST00000522658 USP33Q8TEY7 942 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 SLITRK1Q96PX8 696 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 ACCSQ96QU6 501 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 PNKPQ96T60 521 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 SYT15Q9BQS2 421 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 ACBD6Q9BR61 282 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 FAM213AQ9BRX8 229 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 CCSER1Q9C0I3 900 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 MRPL44Q9H9J2 332 aaKnown RBP6.64□□□□□ -1.35
PABPC1-220ENST00000522658 ARHGEF4Q9NR80 690 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 RBAKQ9NYW8 714 aaPredicted RBP6.64□□□□□ -1.35
PABPC1-220ENST00000522658 SUSD2Q9UGT4 822 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 ITGA11Q9UKX5 1188 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 ARHGAP26Q9UNA1 814 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 MSRB2Q9Y3D2 182 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 SH3BP1Q9Y3L3 701 aa6.64□□□□□ -1.35
PABPC1-220ENST00000522658 CFAP47Q6ZTR5 3102 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 SPAARA0A1B0GVQ0 90 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 C2orf78A6NCI8 922 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 TBC1D3BA6NDS4 549 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 OTOL1A6NHN0 477 aaPredicted RBP6.63□□□□□ -1.35
PABPC1-220ENST00000522658 MEI4A8MW99 385 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 LEFTY2O00292 366 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 ZNF217O75362 1048 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 GCNT3O95395 438 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 HMGA1P17096 107 aaKnown RBP6.63□□□□□ -1.35
PABPC1-220ENST00000522658 NME2P22392 152 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 EIF2DP41214 584 aaKnown RBP6.63□□□□□ -1.35
PABPC1-220ENST00000522658 PPP3CCP48454 512 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 RBP5P82980 135 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 POU5F1Q01860 360 aaKnown RBP6.63□□□□□ -1.35
PABPC1-220ENST00000522658 RING1Q06587 406 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 GOLGA8FQ08AF8 430 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 GOLGA8DPQ0D2H9 430 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 MESP2Q0VG99 397 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 CFAP221Q4G0U5 840 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 TMEM119Q4V9L6 283 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms