RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 CSHL1Q14406 222 aa5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 TBCCQ15814 346 aa5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 SLC4A8Q2Y0W8 1093 aa5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 RRAGAQ7L523 313 aa5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 RASAL3Q86YV0 1011 aa5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 SLC22A17Q8WUG5 538 aa5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 WDR60Q8WVS4 1066 aa5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 NPIPB3Q92617 1050 aa5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 NELL1Q92832 810 aa5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 NPAS1Q99742 590 aa5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 ARHGAP39Q9C0H5 1083 aa5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 OSBPL5Q9H0X9 879 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 ELAC1Q9H777 363 aaKnown RBP5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 ADARB2Q9NS39 739 aaKnown RBP5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 ADAM21Q9UKJ8 722 aa5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 USP22Q9UPT9 525 aa5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 DNAJC16Q9Y2G8 782 aa5.32□□□□□ -1.56
HMGB1P1-201ENST00000522557 A6NLC8 198 aa5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 EFCAB8A8MWE9 144 aa5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 HEXIM1O94992 359 aaKnown RBP5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 C1RP00736 705 aa5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 AKT1P31749 480 aa5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 EIF5P55010 431 aaKnown RBP5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 NHLH1Q02575 133 aa5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 SF3A3Q12874 501 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 EIF2B5Q13144 721 aaKnown RBP5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 ST3GAL2Q16842 350 aa5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 CCDC144NLQ6NUI1 221 aa5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 CLEC9AQ6UXN8 241 aa5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 AMIGO2Q86SJ2 522 aa5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 TBC1D1Q86TI0 1168 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 TSPYL6Q8N831 410 aa5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 USP38Q8NB14 1042 aa5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 AFG1LQ8WV93 481 aa5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 ATRIPQ8WXE1 791 aa5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 KAZALD1Q96I82 304 aa5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 PBKQ96KB5 322 aa5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 SEC62Q99442 399 aaKnown RBP5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 REEP2Q9BRK0 252 aa5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 TAF1DQ9H5J8 278 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 SEPSECSQ9HD40 501 aaKnown RBP5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 KCND3Q9UK17 655 aa5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 RCE1Q9Y256 329 aa5.31□□□□□ -1.56
HMGB1P1-201ENST00000522557 MBD3L5A6NJ08 208 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 E7EVH7 732 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 M0QYT0 321 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 NKX2-8O15522 239 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 SNX2O60749 519 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 PROP1O75360 226 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 RBMXL2O75526 392 aaKnown RBP5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 ZFXP17010 805 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 IGFBP2P18065 325 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 WT1P19544 449 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 CTGFP29279 349 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 GKP32189 559 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 AARSP49588 968 aaKnown RBP eCLIP5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 FOXL2P58012 376 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 EIF4A1P60842 406 aaKnown RBP5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 G3BP1Q13283 466 aaKnown RBP eCLIP5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 DNASE1L3Q13609 305 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 FAM187BQ17R55 369 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 AAK1Q2M2I8 961 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 ZNF618Q5T7W0 954 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 TEDDM1Q5T9Z0 273 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 KRTAP5-3Q6L8H2 238 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 C16orf89Q6UX73 402 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 RINLQ6ZS11 566 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 CAND1Q86VP6 1230 aaKnown RBP5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 HEATR4Q86WZ0 1026 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 LINC01465Q8N7H1 131 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 C11orf44Q8N8P7 122 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 CPT1BQ92523 772 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 RUBCNQ92622 972 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 COG8Q96MW5 612 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 PRR25Q96S07 402 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 THAP7Q9BT49 309 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 ALG8Q9BVK2 526 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 GLOD4Q9HC38 313 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 EHD3Q9NZN3 535 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 SEMA5BQ9P283 1151 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 FBXO9Q9UK97 447 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 DERAQ9Y315 318 aa5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 UBE2J1Q9Y385 318 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P1-201ENST00000522557 VWA3AA6NCI4 1184 aa5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 F5H0A9 414 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 EIF5BO60841 1220 aaKnown RBP5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 URI1O94763 535 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 MBD4O95243 580 aa5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 TTLL1O95922 423 aa5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 CYP3A4P08684 503 aa5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 CD19P15391 556 aa5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 GPD1P21695 349 aa5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 CLCN2P51788 898 aa5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 DGKQP52824 942 aa5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 PROK1P58294 105 aa5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 DEUP1Q05D60 604 aa5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 LMOD3Q0VAK6 560 aa5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 TRPC3Q13507 836 aa5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 PRICKLE4Q2TBC4 344 aa5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 ZNF788Q6ZQV5 615 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms