RNA–Protein interactions for RNA: ENST00000522501.1

CDKL3-208, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 3

Gene CDKL3, Length 432 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-208ENST00000522501 FOXR2Q6PJQ5 311 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 TMCO3Q6UWJ1 677 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 VSTM1Q6UX27 236 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 RAD9BQ6WBX8 426 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 C4orf50Q6ZRC1 276 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 DENND5BQ6ZUT9 1274 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 SV2BQ7L1I2 683 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 SLCO6A1Q86UG4 719 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 DDX42Q86XP3 938 aaKnown RBP eCLIP9.1□□□□□ -0.95
CDKL3-208ENST00000522501 CREBRFQ8IUR6 639 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 BRSK2Q8IWQ3 736 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 MYCT1Q8N699 235 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 CSGALNACT2Q8N6G5 542 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 TOP6BLQ8N6T0 577 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 TERB1Q8NA31 727 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 CPLX3Q8WVH0 158 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 PLIN2Q99541 437 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 DESI2Q9BSY9 194 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 CARD6Q9BX69 1037 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 RNF38Q9H0F5 515 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 VPS16Q9H269 839 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 ST6GALNAC4Q9H4F1 302 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 CD93Q9NPY3 652 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 ZNHIT6Q9NWK9 470 aaKnown RBP9.1□□□□□ -0.95
CDKL3-208ENST00000522501 SMPD4Q9NXE4 827 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 CFAP97Q9P2B7 532 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.1□□□□□ -0.95
CDKL3-208ENST00000522501 ITGA11Q9UKX5 1188 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 HCN2Q9UL51 889 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 CYP8B1Q9UNU6 501 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 PCDHB9Q9Y5E1 797 aa9.1□□□□□ -0.95
CDKL3-208ENST00000522501 V9GYY5 206 aaPredicted RBP9.1□□□□□ -0.95
CDKL3-208ENST00000522501 ASXL3Q9C0F0 2248 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 A0A087WV48 116 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 CTAGE9A4FU28 777 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 ZNF840PA6NDX5 716 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 TBCAO75347 108 aaKnown RBP9.09□□□□□ -0.95
CDKL3-208ENST00000522501 ZNF217O75362 1048 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 DKK1O94907 266 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 ADSSP30520 456 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 KRT9P35527 623 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 PPP3CCP48454 512 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 LHX1P48742 406 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 PSMC1P62191 440 aaKnown RBP9.09□□□□□ -0.95
CDKL3-208ENST00000522501 NOP14P78316 857 aaKnown RBP9.09□□□□□ -0.95
CDKL3-208ENST00000522501 KRT83P78385 493 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 CBX1P83916 185 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 TFAMQ00059 246 aaKnown RBP9.09□□□□□ -0.95
CDKL3-208ENST00000522501 SOWAHAQ2M3V2 549 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 ERCC6LQ2NKX8 1250 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 LY6G5CQ5SRR4 150 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 C10orf76Q5T2E6 689 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 UNC13DQ70J99 1090 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 TMPRSS7Q7RTY8 843 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 LIMS2Q7Z4I7 341 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 OR8K1Q8NGG5 319 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 KBTBD7Q8WVZ9 684 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 OTUB2Q96DC9 234 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 CRELD1Q96HD1 420 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 UBL7Q96S82 380 aaPredicted RBP9.09□□□□□ -0.95
CDKL3-208ENST00000522501 TSG101Q99816 390 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 DUSP9Q99956 384 aaKnown RBP9.09□□□□□ -0.95
CDKL3-208ENST00000522501 SYT15Q9BQS2 421 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 ZDHHC5Q9C0B5 715 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 IKZF4Q9H2S9 585 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 FAM124BQ9H5Z6 455 aaPredicted RBP9.09□□□□□ -0.95
CDKL3-208ENST00000522501 MRPL44Q9H9J2 332 aaKnown RBP9.09□□□□□ -0.95
CDKL3-208ENST00000522501 CRTAC1Q9NQ79 661 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 BLOC1S4Q9NUP1 217 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 TOR4AQ9NXH8 423 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 EHD2Q9NZN4 543 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 KIAA1522Q9P206 1035 aaPredicted RBP9.09□□□□□ -0.95
CDKL3-208ENST00000522501 AGAP1Q9UPQ3 857 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 LUC7L2Q9Y383 392 aaKnown RBP9.09□□□□□ -0.95
CDKL3-208ENST00000522501 SNX9Q9Y5X1 595 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 MGAQ8IWI9 3026 aa9.09□□□□□ -0.95
CDKL3-208ENST00000522501 KNL1Q8NG31 2342 aa9.08□□□□□ -0.96
CDKL3-208ENST00000522501 A0A1W2PQJ5 194 aa9.08□□□□□ -0.96
CDKL3-208ENST00000522501 E2F8A0AVK6 867 aa9.08□□□□□ -0.96
CDKL3-208ENST00000522501 PES1O00541 588 aaKnown RBP9.08□□□□□ -0.96
CDKL3-208ENST00000522501 ATP2C2O75185 946 aa9.08□□□□□ -0.96
CDKL3-208ENST00000522501 TULP3O75386 442 aa9.08□□□□□ -0.96
CDKL3-208ENST00000522501 KIF20AO95235 890 aa9.08□□□□□ -0.96
CDKL3-208ENST00000522501 TUBBP07437 444 aa9.08□□□□□ -0.96
CDKL3-208ENST00000522501 ZNF883P0CG24 379 aa9.08□□□□□ -0.96
CDKL3-208ENST00000522501 ANXA13P27216 316 aa9.08□□□□□ -0.96
CDKL3-208ENST00000522501 NTSR1P30989 418 aa9.08□□□□□ -0.96
CDKL3-208ENST00000522501 CYLC1P35663 651 aaPredicted RBP9.08□□□□□ -0.96
CDKL3-208ENST00000522501 MTIF2P46199 727 aaKnown RBP9.08□□□□□ -0.96
CDKL3-208ENST00000522501 GAD2Q05329 585 aa9.08□□□□□ -0.96
CDKL3-208ENST00000522501 LRRC63Q05C16 580 aa9.08□□□□□ -0.96
CDKL3-208ENST00000522501 NAA30Q147X3 362 aaPredicted RBP9.08□□□□□ -0.96
CDKL3-208ENST00000522501 MAPRE1Q15691 268 aaKnown RBP9.08□□□□□ -0.96
CDKL3-208ENST00000522501 WHAMMP3Q1A5X7 153 aa9.08□□□□□ -0.96
CDKL3-208ENST00000522501 FIGNQ5HY92 759 aa9.08□□□□□ -0.96
CDKL3-208ENST00000522501 EGFLAMQ63HQ2 1017 aa9.08□□□□□ -0.96
CDKL3-208ENST00000522501 SCARA3Q6AZY7 606 aa9.08□□□□□ -0.96
CDKL3-208ENST00000522501 MIB1Q86YT6 1006 aa9.08□□□□□ -0.96
CDKL3-208ENST00000522501 TXLNBQ8N3L3 684 aa9.08□□□□□ -0.96
CDKL3-208ENST00000522501 IPO4Q8TEX9 1081 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms