RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 TRIM16O95361 564 aa21.78■■□□□ 1.08
PABPC1-218ENST00000521865 CD59P13987 128 aa21.78■■□□□ 1.08
PABPC1-218ENST00000521865 PRKCHP24723 683 aa21.78■■□□□ 1.08
PABPC1-218ENST00000521865 TPMTP51580 245 aa21.78■■□□□ 1.08
PABPC1-218ENST00000521865 FAM193AP78312 1265 aa21.78■■□□□ 1.08
PABPC1-218ENST00000521865 FKBP3Q00688 224 aaKnown RBP21.78■■□□□ 1.08
PABPC1-218ENST00000521865 HNRNPDQ14103 355 aaKnown RBP21.78■■□□□ 1.08
PABPC1-218ENST00000521865 TRIP4Q15650 581 aaPredicted RBP21.78■■□□□ 1.08
PABPC1-218ENST00000521865 ZNF658Q5TYW1 1059 aaPredicted RBP21.78■■□□□ 1.08
PABPC1-218ENST00000521865 ZCCHC9Q8N567 271 aaKnown RBP21.78■■□□□ 1.08
PABPC1-218ENST00000521865 GATA6Q92908 595 aa21.78■■□□□ 1.08
PABPC1-218ENST00000521865 TMEM121BQ9BXQ6 578 aaPredicted RBP21.78■■□□□ 1.08
PABPC1-218ENST00000521865 SFMBT1Q9UHJ3 866 aa21.78■■□□□ 1.08
PABPC1-218ENST00000521865 RALYQ9UKM9 306 aaKnown RBP21.78■■□□□ 1.08
PABPC1-218ENST00000521865 KLK13Q9UKR3 277 aa21.78■■□□□ 1.08
PABPC1-218ENST00000521865 HBS1LQ9Y450 684 aaKnown RBP21.78■■□□□ 1.08
PABPC1-218ENST00000521865 KCNJ18B7U540 433 aa21.77■■□□□ 1.08
PABPC1-218ENST00000521865 TIMM44O43615 452 aa21.77■■□□□ 1.08
PABPC1-218ENST00000521865 SH3BP5O60239 455 aa21.77■■□□□ 1.08
PABPC1-218ENST00000521865 VDRP11473 427 aa21.77■■□□□ 1.08
PABPC1-218ENST00000521865 LCP1P13796 627 aa21.77■■□□□ 1.08
PABPC1-218ENST00000521865 GRIK2Q13002 908 aa21.77■■□□□ 1.08
PABPC1-218ENST00000521865 SLC14A1Q13336 389 aa21.77■■□□□ 1.08
PABPC1-218ENST00000521865 ENPP2Q13822 863 aa21.77■■□□□ 1.08
PABPC1-218ENST00000521865 DCAF12L1Q5VU92 463 aa21.77■■□□□ 1.08
PABPC1-218ENST00000521865 BSPRYQ5W0U4 402 aa21.77■■□□□ 1.08
PABPC1-218ENST00000521865 FAM124AQ86V42 546 aa21.77■■□□□ 1.08
PABPC1-218ENST00000521865 CADM4Q8NFZ8 388 aa21.77■■□□□ 1.08
PABPC1-218ENST00000521865 ZCCHC14Q8WYQ9 949 aaKnown RBP21.77■■□□□ 1.08
PABPC1-218ENST00000521865 CAMK1GQ96NX5 476 aa21.77■■□□□ 1.08
PABPC1-218ENST00000521865 ARMCX3Q9UH62 379 aaPredicted RBP21.77■■□□□ 1.08
PABPC1-218ENST00000521865 COQ4Q9Y3A0 265 aa21.77■■□□□ 1.08
PABPC1-218ENST00000521865 CFAP47Q6ZTR5 3102 aa21.76■■□□□ 1.07
PABPC1-218ENST00000521865 SMC2O95347 1197 aa21.76■■□□□ 1.07
PABPC1-218ENST00000521865 SETSIPP0DME0 302 aa21.76■■□□□ 1.07
PABPC1-218ENST00000521865 HLA-EP13747 358 aa21.76■■□□□ 1.07
PABPC1-218ENST00000521865 TBXAS1P24557 533 aaPredicted RBP21.76■■□□□ 1.07
PABPC1-218ENST00000521865 FNDC3BQ53EP0 1204 aaKnown RBP21.76■■□□□ 1.07
PABPC1-218ENST00000521865 ANKRD40Q6AI12 368 aa21.76■■□□□ 1.07
PABPC1-218ENST00000521865 FAM217AQ8IXS0 508 aa21.76■■□□□ 1.07
PABPC1-218ENST00000521865 CHCHD4Q8N4Q1 142 aa21.76■■□□□ 1.07
PABPC1-218ENST00000521865 TMA16Q96EY4 203 aaKnown RBP21.76■■□□□ 1.07
PABPC1-218ENST00000521865 NUP58Q9BVL2 599 aa21.76■■□□□ 1.07
PABPC1-218ENST00000521865 ZDHHC5Q9C0B5 715 aa21.76■■□□□ 1.07
PABPC1-218ENST00000521865 ABCC13Q9NSE7 274 aa21.76■■□□□ 1.07
PABPC1-218ENST00000521865 PLA2G4CQ9UP65 541 aa21.76■■□□□ 1.07
PABPC1-218ENST00000521865 MSRB2Q9Y3D2 182 aa21.76■■□□□ 1.07
PABPC1-218ENST00000521865 ASCC3Q8N3C0 2202 aaKnown RBP21.76■■□□□ 1.07
PABPC1-218ENST00000521865 YJEFN3A6XGL0 299 aa21.75■■□□□ 1.07
PABPC1-218ENST00000521865 E7ENQ6 273 aa21.75■■□□□ 1.07
PABPC1-218ENST00000521865 HOXD9P28356 352 aaPredicted RBP21.75■■□□□ 1.07
PABPC1-218ENST00000521865 COPAP53621 1224 aa21.75■■□□□ 1.07
PABPC1-218ENST00000521865 PMS1P54277 932 aaKnown RBP21.75■■□□□ 1.07
PABPC1-218ENST00000521865 ZNF445P59923 1031 aa21.75■■□□□ 1.07
PABPC1-218ENST00000521865 TRIP6Q15654 476 aaKnown RBP21.75■■□□□ 1.07
PABPC1-218ENST00000521865 ZNF423Q2M1K9 1284 aa21.75■■□□□ 1.07
PABPC1-218ENST00000521865 TMEM215Q68D42 235 aa21.75■■□□□ 1.07
PABPC1-218ENST00000521865 CHST9Q7L1S5 443 aa21.75■■□□□ 1.07
PABPC1-218ENST00000521865 BHLHA9Q7RTU4 235 aa21.75■■□□□ 1.07
PABPC1-218ENST00000521865 NAXDQ8IW45 347 aa21.75■■□□□ 1.07
PABPC1-218ENST00000521865 DNASE2BQ8WZ79 361 aa21.75■■□□□ 1.07
PABPC1-218ENST00000521865 SNX19Q92543 992 aa21.75■■□□□ 1.07
PABPC1-218ENST00000521865 SMARCE1Q969G3 411 aa21.75■■□□□ 1.07
PABPC1-218ENST00000521865 GSDMAQ96QA5 445 aa21.75■■□□□ 1.07
PABPC1-218ENST00000521865 KIAA1257Q9ULG3 409 aa21.75■■□□□ 1.07
PABPC1-218ENST00000521865 NFE2L3Q9Y4A8 694 aa21.75■■□□□ 1.07
PABPC1-218ENST00000521865 TRIM49BA6NDI0 452 aa21.74■■□□□ 1.07
PABPC1-218ENST00000521865 METTL12A8MUP2 240 aa21.74■■□□□ 1.07
PABPC1-218ENST00000521865 O00370 1275 aa21.74■■□□□ 1.07
PABPC1-218ENST00000521865 MSI1O43347 362 aaKnown RBP21.74■■□□□ 1.07
PABPC1-218ENST00000521865 HLA-FP30511 346 aa21.74■■□□□ 1.07
PABPC1-218ENST00000521865 RGS7P49802 495 aa21.74■■□□□ 1.07
PABPC1-218ENST00000521865 LRRC63Q05C16 580 aa21.74■■□□□ 1.07
PABPC1-218ENST00000521865 ADGRF1Q5T601 910 aa21.74■■□□□ 1.07
PABPC1-218ENST00000521865 TMEM270Q6UE05 265 aa21.74■■□□□ 1.07
PABPC1-218ENST00000521865 FMR1NBQ8N0W7 255 aaPredicted RBP21.74■■□□□ 1.07
PABPC1-218ENST00000521865 OR2T3Q8NH03 318 aa21.74■■□□□ 1.07
PABPC1-218ENST00000521865 WFIKKN2Q8TEU8 576 aa21.74■■□□□ 1.07
PABPC1-218ENST00000521865 CYB5D2Q8WUJ1 264 aa21.74■■□□□ 1.07
PABPC1-218ENST00000521865 KCTD13Q8WZ19 329 aa21.74■■□□□ 1.07
PABPC1-218ENST00000521865 ERCC4Q92889 916 aaPredicted RBP21.74■■□□□ 1.07
PABPC1-218ENST00000521865 CNGB3Q9NQW8 809 aa21.74■■□□□ 1.07
PABPC1-218ENST00000521865 ABCB8Q9NUT2 735 aa21.74■■□□□ 1.07
PABPC1-218ENST00000521865 EIF2B4Q9UI10 523 aaKnown RBP21.74■■□□□ 1.07
PABPC1-218ENST00000521865 GGA2Q9UJY4 613 aa21.74■■□□□ 1.07
PABPC1-218ENST00000521865 PCDHB4Q9Y5E5 795 aa21.74■■□□□ 1.07
PABPC1-218ENST00000521865 PIK3R2O00459 728 aa21.73■■□□□ 1.07
PABPC1-218ENST00000521865 BCAT2O15382 392 aaPredicted RBP21.73■■□□□ 1.07
PABPC1-218ENST00000521865 GJB3O75712 270 aa21.73■■□□□ 1.07
PABPC1-218ENST00000521865 DAOAP59103 153 aa21.73■■□□□ 1.07
PABPC1-218ENST00000521865 STIM1Q13586 685 aa21.73■■□□□ 1.07
PABPC1-218ENST00000521865 COBLL1Q53SF7 1204 aa21.73■■□□□ 1.07
PABPC1-218ENST00000521865 ZNF366Q8N895 744 aa21.73■■□□□ 1.07
PABPC1-218ENST00000521865 RBBP8NLQ8NC74 664 aaPredicted RBP21.73■■□□□ 1.07
PABPC1-218ENST00000521865 SETD7Q8WTS6 366 aaKnown RBP21.73■■□□□ 1.07
PABPC1-218ENST00000521865 GOLGA1Q92805 767 aa21.73■■□□□ 1.07
PABPC1-218ENST00000521865 SLC35C1Q96A29 364 aa21.73■■□□□ 1.07
PABPC1-218ENST00000521865 LHX5Q9H2C1 402 aa21.73■■□□□ 1.07
PABPC1-218ENST00000521865 HOOK1Q9UJC3 728 aaKnown RBP21.73■■□□□ 1.07
PABPC1-218ENST00000521865 CER1O95813 267 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms