RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 TAC4Q86UU9 113 aa19.1■□□□□ 0.65
TRAPPC9-210ENST00000521667 TDRPQ86YL5 185 aa19.1■□□□□ 0.65
TRAPPC9-210ENST00000521667 HTR3CQ8WXA8 447 aa19.1■□□□□ 0.65
TRAPPC9-210ENST00000521667 WDCPQ9H6R7 721 aa19.1■□□□□ 0.65
TRAPPC9-210ENST00000521667 PPCSQ9HAB8 311 aa19.1■□□□□ 0.65
TRAPPC9-210ENST00000521667 ETNK1Q9HBU6 452 aa19.1■□□□□ 0.65
TRAPPC9-210ENST00000521667 PPANQ9NQ55 473 aaKnown RBP19.1■□□□□ 0.65
TRAPPC9-210ENST00000521667 FAM72CH0Y354 149 aa19.09■□□□□ 0.65
TRAPPC9-210ENST00000521667 TNFRSF10BO14763 440 aa19.09■□□□□ 0.65
TRAPPC9-210ENST00000521667 DCLK1O15075 740 aa19.09■□□□□ 0.65
TRAPPC9-210ENST00000521667 TSHRP16473 764 aa19.09■□□□□ 0.65
TRAPPC9-210ENST00000521667 GCAP28676 217 aa19.09■□□□□ 0.65
TRAPPC9-210ENST00000521667 HCAR3P49019 387 aa19.09■□□□□ 0.65
TRAPPC9-210ENST00000521667 CBLBQ13191 982 aa19.09■□□□□ 0.65
TRAPPC9-210ENST00000521667 SYCP2LQ5T4T6 812 aa19.09■□□□□ 0.65
TRAPPC9-210ENST00000521667 FAXCQ5TGI0 409 aa19.09■□□□□ 0.65
TRAPPC9-210ENST00000521667 FAM72AQ5TYM5 149 aa19.09■□□□□ 0.65
TRAPPC9-210ENST00000521667 FAM72DQ6L9T8 149 aa19.09■□□□□ 0.65
TRAPPC9-210ENST00000521667 FAM72BQ86X60 149 aa19.09■□□□□ 0.65
TRAPPC9-210ENST00000521667 CYP4X1Q8N118 509 aa19.09■□□□□ 0.65
TRAPPC9-210ENST00000521667 VPS52Q8N1B4 723 aa19.09■□□□□ 0.65
TRAPPC9-210ENST00000521667 DQX1Q8TE96 717 aaKnown RBP19.09■□□□□ 0.65
TRAPPC9-210ENST00000521667 APBB2Q92870 758 aa19.09■□□□□ 0.65
TRAPPC9-210ENST00000521667 CASD1Q96PB1 797 aa19.09■□□□□ 0.65
TRAPPC9-210ENST00000521667 TBK1Q9UHD2 729 aa19.09■□□□□ 0.65
TRAPPC9-210ENST00000521667 AMHP03971 560 aa19.08■□□□□ 0.65
TRAPPC9-210ENST00000521667 VAV1P15498 845 aa19.08■□□□□ 0.65
TRAPPC9-210ENST00000521667 SEC24CP53992 1094 aa19.08■□□□□ 0.65
TRAPPC9-210ENST00000521667 TPI1P60174 286 aa19.08■□□□□ 0.65
TRAPPC9-210ENST00000521667 YWHAGP61981 247 aaKnown RBP eCLIP19.08■□□□□ 0.654e-6■■■■□ 21.9
TRAPPC9-210ENST00000521667 MTM1Q13496 603 aa19.08■□□□□ 0.65
TRAPPC9-210ENST00000521667 FOXR1Q6PIV2 292 aa19.08■□□□□ 0.65
TRAPPC9-210ENST00000521667 PALM2Q8IXS6 379 aa19.08■□□□□ 0.65
TRAPPC9-210ENST00000521667 LGMNQ99538 433 aa19.08■□□□□ 0.65
TRAPPC9-210ENST00000521667 ABI2Q9NYB9 513 aaPredicted RBP19.08■□□□□ 0.65
TRAPPC9-210ENST00000521667 ADAM28Q9UKQ2 775 aa19.08■□□□□ 0.65
TRAPPC9-210ENST00000521667 LRFN2Q9ULH4 789 aa19.08■□□□□ 0.65
TRAPPC9-210ENST00000521667 POC1B-GALNT4F8VUJ3 575 aa19.08■□□□□ 0.64
TRAPPC9-210ENST00000521667 NDUFAB1O14561 156 aa19.08■□□□□ 0.64
TRAPPC9-210ENST00000521667 PQBP1O60828 265 aaKnown RBP19.08■□□□□ 0.64
TRAPPC9-210ENST00000521667 METTL18O95568 372 aa19.08■□□□□ 0.64
TRAPPC9-210ENST00000521667 SSTR1P30872 391 aa19.08■□□□□ 0.64
TRAPPC9-210ENST00000521667 ZNF135P52742 658 aaPredicted RBP19.08■□□□□ 0.64
TRAPPC9-210ENST00000521667 IFRD2Q12894 506 aaPredicted RBP19.08■□□□□ 0.64
TRAPPC9-210ENST00000521667 PDK1Q15118 436 aa19.08■□□□□ 0.64
TRAPPC9-210ENST00000521667 PRKD1Q15139 912 aaPredicted RBP19.08■□□□□ 0.64
TRAPPC9-210ENST00000521667 NFE2Q16621 373 aaPredicted RBP19.08■□□□□ 0.64
TRAPPC9-210ENST00000521667 VARS2Q5ST30 1063 aaKnown RBP19.08■□□□□ 0.64
TRAPPC9-210ENST00000521667 C3orf62Q6ZUJ4 267 aa19.08■□□□□ 0.64
TRAPPC9-210ENST00000521667 TADA2BQ86TJ2 420 aa19.08■□□□□ 0.64
TRAPPC9-210ENST00000521667 NLRP14Q86W24 1093 aa19.08■□□□□ 0.64
TRAPPC9-210ENST00000521667 SCN4BQ8IWT1 228 aa19.08■□□□□ 0.64
TRAPPC9-210ENST00000521667 FUBP3Q96I24 572 aaKnown RBP eCLIP19.08■□□□□ 0.64
TRAPPC9-210ENST00000521667 XPO6Q96QU8 1125 aaKnown RBP19.08■□□□□ 0.64
TRAPPC9-210ENST00000521667 TKTL2Q9H0I9 626 aa19.08■□□□□ 0.64
TRAPPC9-210ENST00000521667 ABCC13Q9NSE7 274 aa19.08■□□□□ 0.64
TRAPPC9-210ENST00000521667 PRDM4Q9UKN5 801 aa19.08■□□□□ 0.64
TRAPPC9-210ENST00000521667 OGDHLQ9ULD0 1010 aa19.08■□□□□ 0.64
TRAPPC9-210ENST00000521667 PPP1R12AO14974 1030 aaPredicted RBP19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 APRTP07741 180 aa19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 ATP2A2P16615 1042 aaKnown RBP19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 ERCC2P18074 760 aa19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 ELK3P41970 407 aa19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 TMED2Q15363 201 aa19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 ARHGEF18Q6ZSZ5 1173 aa19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 PDZD4Q76G19 769 aaPredicted RBP19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 MAML1Q92585 1016 aa19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 FETUBQ9UGM5 382 aa19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 SLC24A2Q9UI40 661 aa19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 RABGEF1Q9UJ41 708 aa19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 CHMP2BQ9UQN3 213 aa19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 ACTL7BQ9Y614 415 aa19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 NLRC5Q86WI3 1866 aa19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 A0A0A0MRY4 1105 aa19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 GMNCA6NCL1 334 aa19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 IGLV3-25P01717 112 aa19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 GLUD2P49448 558 aa19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 GATMP50440 423 aa19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 ATN1P54259 1190 aaPredicted RBP19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 NR1H3Q13133 447 aa19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 RASA2Q15283 850 aa19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 TCTN1Q2MV58 587 aa19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 BTBD8Q5XKL5 378 aa19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 MCUQ8NE86 351 aa19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 SPATA13Q96N96 652 aa19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 FERMT1Q9BQL6 677 aa19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 INTS9Q9NV88 658 aaKnown RBP19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 TEX264Q9Y6I9 313 aa19.07■□□□□ 0.64
TRAPPC9-210ENST00000521667 HOXA2O43364 376 aa19.06■□□□□ 0.64
TRAPPC9-210ENST00000521667 STK10O94804 968 aaKnown RBP19.06■□□□□ 0.64
TRAPPC9-210ENST00000521667 ALDH2P05091 517 aa19.06■□□□□ 0.64
TRAPPC9-210ENST00000521667 CREB1P16220 341 aa19.06■□□□□ 0.64
TRAPPC9-210ENST00000521667 TPSB2P20231 275 aa19.06■□□□□ 0.64
TRAPPC9-210ENST00000521667 AP1B1Q10567 949 aa19.06■□□□□ 0.64
TRAPPC9-210ENST00000521667 TPSAB1Q15661 275 aa19.06■□□□□ 0.64
TRAPPC9-210ENST00000521667 CTXN3Q4LDR2 81 aa19.06■□□□□ 0.64
TRAPPC9-210ENST00000521667 ANKRD20A2Q5SQ80 823 aa19.06■□□□□ 0.64
TRAPPC9-210ENST00000521667 ANKRD20A1Q5TYW2 823 aa19.06■□□□□ 0.64
TRAPPC9-210ENST00000521667 FAM171A1Q5VUB5 890 aa19.06■□□□□ 0.64
TRAPPC9-210ENST00000521667 ANKRD20A3Q5VUR7 823 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms