RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 FAM167BQ9BTA0 163 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 MECRQ9BV79 373 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 ELOVL1Q9BW60 279 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 VPS16Q9H269 839 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 TAF1DQ9H5J8 278 aaPredicted RBP5.86□□□□□ -1.47
SKP1-208ENST00000521216 AGO4Q9HCK5 861 aaKnown RBP5.86□□□□□ -1.47
SKP1-208ENST00000521216 SEPSECSQ9HD40 501 aaKnown RBP5.86□□□□□ -1.47
SKP1-208ENST00000521216 ARL8BQ9NVJ2 186 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 NFU1Q9UMS0 254 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 DAPP1Q9UN19 280 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 CNTN6Q9UQ52 1028 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 COX11Q9Y6N1 276 aa5.86□□□□□ -1.47
SKP1-208ENST00000521216 H3BNC9 293 aa5.85□□□□□ -1.47
SKP1-208ENST00000521216 EIF3JO75822 258 aaKnown RBP5.85□□□□□ -1.47
SKP1-208ENST00000521216 CHRM5P08912 532 aaPredicted RBP5.85□□□□□ -1.47
SKP1-208ENST00000521216 ATF7P17544 494 aaPredicted RBP5.85□□□□□ -1.47
SKP1-208ENST00000521216 PROK1P58294 105 aa5.85□□□□□ -1.47
SKP1-208ENST00000521216 FOXO1Q12778 655 aa5.85□□□□□ -1.47
SKP1-208ENST00000521216 GAB1Q13480 694 aa5.85□□□□□ -1.47
SKP1-208ENST00000521216 ZRSR2Q15696 482 aaKnown RBP5.85□□□□□ -1.47
SKP1-208ENST00000521216 AAK1Q2M2I8 961 aa5.85□□□□□ -1.47
SKP1-208ENST00000521216 NFRKBQ6P4R8 1299 aa5.85□□□□□ -1.47
SKP1-208ENST00000521216 KYAT3Q6YP21 454 aaKnown RBP5.85□□□□□ -1.47
SKP1-208ENST00000521216 ZNF782Q6ZMW2 699 aaPredicted RBP5.85□□□□□ -1.47
SKP1-208ENST00000521216 STT3BQ8TCJ2 826 aa5.85□□□□□ -1.47
SKP1-208ENST00000521216 OTUD7AQ8TE49 926 aaPredicted RBP5.85□□□□□ -1.47
SKP1-208ENST00000521216 RSC1A1Q92681 617 aa5.85□□□□□ -1.47
SKP1-208ENST00000521216 KAZALD1Q96I82 304 aa5.85□□□□□ -1.47
SKP1-208ENST00000521216 HIC2Q96JB3 615 aa5.85□□□□□ -1.47
SKP1-208ENST00000521216 PAAF1Q9BRP4 392 aa5.85□□□□□ -1.47
SKP1-208ENST00000521216 EFHD1Q9BUP0 239 aa5.85□□□□□ -1.47
SKP1-208ENST00000521216 CDCP1Q9H5V8 836 aa5.85□□□□□ -1.47
SKP1-208ENST00000521216 MYH16Q9H6N6 1097 aa5.85□□□□□ -1.47
SKP1-208ENST00000521216 PRDM8Q9NQV8 689 aa5.85□□□□□ -1.47
SKP1-208ENST00000521216 RXFP3Q9NSD7 469 aa5.85□□□□□ -1.47
SKP1-208ENST00000521216 TRPC5Q9UL62 973 aaPredicted RBP5.85□□□□□ -1.47
SKP1-208ENST00000521216 SLC12A4Q9UP95 1085 aa5.85□□□□□ -1.47
SKP1-208ENST00000521216 TBC1D3DA0A087WVF3 549 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 TBC1D3IA0A087WXS9 549 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 TBC1D3EA0A087X179 549 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 TBC1D3KA0A087X1G2 549 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 TBC1D3BA6NDS4 549 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 FAM90A18PA6NE21 464 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 TBC1D3FA6NER0 549 aaPredicted RBP5.84□□□□□ -1.47
SKP1-208ENST00000521216 FAM90A16PA6NEW6 464 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 FAM90A9PA6NNJ1 464 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 EFCAB8A8MWE9 144 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 FAM90A5PA8MXJ8 464 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 TBC1D3LB9A6J9 549 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 RNF8O76064 485 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 LARGE1O95461 756 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 PRKCGP05129 697 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 FAM90A15PP0C7V4 464 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 FAM90A14PP0C7W9 464 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 TBC1D3HP0C7X1 549 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 CYP2A6P11509 494 aaPredicted RBP5.84□□□□□ -1.47
SKP1-208ENST00000521216 SLC8A1P32418 973 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 GRK5P34947 590 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 PNLIPRP1P54315 467 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 NANOS3P60323 173 aaKnown RBP5.84□□□□□ -1.47
SKP1-208ENST00000521216 TAF5Q15542 800 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 INO80DQ53TQ3 878 aaPredicted RBP5.84□□□□□ -1.47
SKP1-208ENST00000521216 TBC1D3GQ6DHY5 549 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 TBC1D3CQ6IPX1 549 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 WDR93Q6P2C0 686 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 TBC1D3Q8IZP1 549 aaPredicted RBP5.84□□□□□ -1.47
SKP1-208ENST00000521216 GALNT15Q8N3T1 639 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 NKAPQ8N5F7 415 aaKnown RBP5.84□□□□□ -1.47
SKP1-208ENST00000521216 SEMA6DQ8NFY4 1073 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 GLMPQ8WWB7 406 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 TBC1D20Q96BZ9 403 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 C5orf34Q96MH7 638 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 SCLT1Q96NL6 688 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 TMEM120AQ9BXJ8 343 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 NUAK2Q9H093 628 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 LIN7CQ9NUP9 197 aaKnown RBP5.84□□□□□ -1.47
SKP1-208ENST00000521216 ASNSD1Q9NWL6 643 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 PTGFRNQ9P2B2 879 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 PCDHGB3Q9Y5G1 929 aa5.84□□□□□ -1.47
SKP1-208ENST00000521216 LOC105369274A0A096LPK9 316 aa5.83□□□□□ -1.48
SKP1-208ENST00000521216 LOC102723532A0A0G2JNH3 316 aa5.83□□□□□ -1.48
SKP1-208ENST00000521216 GXYLT2A0PJZ3 443 aa5.83□□□□□ -1.48
SKP1-208ENST00000521216 LINC01548A6NM66 108 aa5.83□□□□□ -1.48
SKP1-208ENST00000521216 KRT38O76015 456 aa5.83□□□□□ -1.48
SKP1-208ENST00000521216 VEGFAP15692 232 aaPredicted RBP5.83□□□□□ -1.48
SKP1-208ENST00000521216 MPGP29372 298 aa5.83□□□□□ -1.48
SKP1-208ENST00000521216 PPM1FP49593 454 aaPredicted RBP5.83□□□□□ -1.48
SKP1-208ENST00000521216 RPL15P61313 204 aaKnown RBP5.83□□□□□ -1.48
SKP1-208ENST00000521216 TANGO2Q6ICL3 276 aa5.83□□□□□ -1.48
SKP1-208ENST00000521216 PTF1AQ7RTS3 328 aa5.83□□□□□ -1.48
SKP1-208ENST00000521216 PRIMA1Q86XR5 153 aa5.83□□□□□ -1.48
SKP1-208ENST00000521216 SMC5Q8IY18 1101 aa5.83□□□□□ -1.48
SKP1-208ENST00000521216 OR4N4Q8N0Y3 316 aa5.83□□□□□ -1.48
SKP1-208ENST00000521216 CSGALNACT1Q8TDX6 532 aa5.83□□□□□ -1.48
SKP1-208ENST00000521216 CPT1BQ92523 772 aa5.83□□□□□ -1.48
SKP1-208ENST00000521216 GAR1Q9NY12 217 aaKnown RBP5.83□□□□□ -1.48
SKP1-208ENST00000521216 SRP68Q9UHB9 627 aaKnown RBP5.83□□□□□ -1.48
SKP1-208ENST00000521216 MAFFQ9ULX9 164 aa5.83□□□□□ -1.48
SKP1-208ENST00000521216 C19orf53Q9UNZ5 99 aaPredicted RBP5.83□□□□□ -1.48
SKP1-208ENST00000521216 ZBTB1Q9Y2K1 713 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms