RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 NT5C1BQ96P26 610 aa20.52■□□□□ 0.88
PABPC1-215ENST00000520804 MKRN2Q9H000 416 aaKnown RBP20.52■□□□□ 0.88
PABPC1-215ENST00000520804 SLC32A1Q9H598 525 aa20.52■□□□□ 0.88
PABPC1-215ENST00000520804 ITM2CQ9NQX7 267 aa20.52■□□□□ 0.88
PABPC1-215ENST00000520804 ABCC13Q9NSE7 274 aa20.52■□□□□ 0.88
PABPC1-215ENST00000520804 USP36Q9P275 1121 aaKnown RBP20.52■□□□□ 0.88
PABPC1-215ENST00000520804 STOML2Q9UJZ1 356 aa20.52■□□□□ 0.88
PABPC1-215ENST00000520804 MAN1B1Q9UKM7 699 aa20.52■□□□□ 0.88
PABPC1-215ENST00000520804 UPK3BL1B0FP48 263 aa20.51■□□□□ 0.87
PABPC1-215ENST00000520804 UPK3BL2E5RIL1 263 aa20.51■□□□□ 0.87
PABPC1-215ENST00000520804 ARHGAP33O14559 1287 aa20.51■□□□□ 0.87
PABPC1-215ENST00000520804 TIMM44O43615 452 aa20.51■□□□□ 0.87
PABPC1-215ENST00000520804 SYNCRIPO60506 623 aaKnown RBP20.51■□□□□ 0.87
PABPC1-215ENST00000520804 LCP1P13796 627 aa20.51■□□□□ 0.87
PABPC1-215ENST00000520804 HOXD9P28356 352 aaPredicted RBP20.51■□□□□ 0.87
PABPC1-215ENST00000520804 PPP1R2P41236 205 aa20.51■□□□□ 0.87
PABPC1-215ENST00000520804 DAOAP59103 153 aa20.51■□□□□ 0.87
PABPC1-215ENST00000520804 ZNF445P59923 1031 aa20.51■□□□□ 0.87
PABPC1-215ENST00000520804 SYCP2LQ5T4T6 812 aa20.51■□□□□ 0.87
PABPC1-215ENST00000520804 TMEM215Q68D42 235 aa20.51■□□□□ 0.87
PABPC1-215ENST00000520804 PIP4P1Q86T03 277 aa20.51■□□□□ 0.87
PABPC1-215ENST00000520804 RGL4Q8IZJ4 473 aa20.51■□□□□ 0.87
PABPC1-215ENST00000520804 HDDC3Q8N4P3 179 aa20.51■□□□□ 0.87
PABPC1-215ENST00000520804 SLC35F5Q8WV83 523 aa20.51■□□□□ 0.87
PABPC1-215ENST00000520804 SORCS1Q8WY21 1168 aa20.51■□□□□ 0.87
PABPC1-215ENST00000520804 CIPCQ9C0C6 399 aa20.51■□□□□ 0.87
PABPC1-215ENST00000520804 PCDHB4Q9Y5E5 795 aa20.51■□□□□ 0.87
PABPC1-215ENST00000520804 RNF225M0QZC1 329 aaPredicted RBP20.5■□□□□ 0.87
PABPC1-215ENST00000520804 TSPAN3O60637 253 aa20.5■□□□□ 0.87
PABPC1-215ENST00000520804 LATS1O95835 1130 aa20.5■□□□□ 0.87
PABPC1-215ENST00000520804 PRKCHP24723 683 aa20.5■□□□□ 0.87
PABPC1-215ENST00000520804 CNGA2Q16280 664 aa20.5■□□□□ 0.87
PABPC1-215ENST00000520804 CCDC40Q4G0X9 1142 aa20.5■□□□□ 0.87
PABPC1-215ENST00000520804 ADGRF1Q5T601 910 aa20.5■□□□□ 0.87
PABPC1-215ENST00000520804 TMPRSS6Q8IU80 811 aa20.5■□□□□ 0.87
PABPC1-215ENST00000520804 MINDY1Q8N5J2 469 aa20.5■□□□□ 0.87
PABPC1-215ENST00000520804 TOE1Q96GM8 510 aaKnown RBP20.5■□□□□ 0.87
PABPC1-215ENST00000520804 ZSWIM1Q9BR11 485 aa20.5■□□□□ 0.87
PABPC1-215ENST00000520804 WSB2Q9NYS7 404 aaPredicted RBP20.5■□□□□ 0.87
PABPC1-215ENST00000520804 SUSD2Q9UGT4 822 aa20.5■□□□□ 0.87
PABPC1-215ENST00000520804 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.5■□□□□ 0.87
PABPC1-215ENST00000520804 KCNJ18B7U540 433 aa20.49■□□□□ 0.87
PABPC1-215ENST00000520804 P4HA2O15460 535 aa20.49■□□□□ 0.87
PABPC1-215ENST00000520804 MSI1O43347 362 aaKnown RBP20.49■□□□□ 0.87
PABPC1-215ENST00000520804 OPHN1O60890 802 aa20.49■□□□□ 0.87
PABPC1-215ENST00000520804 GABBR2O75899 941 aa20.49■□□□□ 0.87
PABPC1-215ENST00000520804 SYPP08247 313 aa20.49■□□□□ 0.87
PABPC1-215ENST00000520804 NCAM1P13591 858 aa20.49■□□□□ 0.87
PABPC1-215ENST00000520804 HLA-FP30511 346 aa20.49■□□□□ 0.87
PABPC1-215ENST00000520804 RGS7P49802 495 aa20.49■□□□□ 0.87
PABPC1-215ENST00000520804 COPAP53621 1224 aa20.49■□□□□ 0.87
PABPC1-215ENST00000520804 PLEKHG6Q3KR16 790 aa20.49■□□□□ 0.87
PABPC1-215ENST00000520804 WDR45BQ5MNZ6 344 aa20.49■□□□□ 0.87
PABPC1-215ENST00000520804 TTI2Q6NXR4 508 aa20.49■□□□□ 0.87
PABPC1-215ENST00000520804 PMF1Q6P1K2 205 aa20.49■□□□□ 0.87
PABPC1-215ENST00000520804 MSANTD2Q6P1R3 559 aa20.49■□□□□ 0.87
PABPC1-215ENST00000520804 PPM1KQ8N3J5 372 aa20.49■□□□□ 0.87
PABPC1-215ENST00000520804 LMO3Q8TAP4 145 aa20.49■□□□□ 0.87
PABPC1-215ENST00000520804 IRGQQ8WZA9 623 aa20.49■□□□□ 0.87
PABPC1-215ENST00000520804 PRCCQ92733 491 aaPredicted RBP20.49■□□□□ 0.87
PABPC1-215ENST00000520804 KAT5Q92993 513 aa20.49■□□□□ 0.87
PABPC1-215ENST00000520804 SIPA1Q96FS4 1042 aa20.49■□□□□ 0.87
PABPC1-215ENST00000520804 CKAP5Q14008 2032 aa20.49■□□□□ 0.87
PABPC1-215ENST00000520804 TOP3BO95985 862 aaKnown RBP20.48■□□□□ 0.87
PABPC1-215ENST00000520804 IGLV3-19P01714 112 aa20.48■□□□□ 0.87
PABPC1-215ENST00000520804 EPHX1P07099 455 aa20.48■□□□□ 0.87
PABPC1-215ENST00000520804 PROS1P07225 676 aa20.48■□□□□ 0.87
PABPC1-215ENST00000520804 GNSP15586 552 aa20.48■□□□□ 0.87
PABPC1-215ENST00000520804 BMP6P22004 513 aa20.48■□□□□ 0.87
PABPC1-215ENST00000520804 MAOBP27338 520 aa20.48■□□□□ 0.87
PABPC1-215ENST00000520804 OXTRP30559 389 aa20.48■□□□□ 0.87
PABPC1-215ENST00000520804 TPMTP51580 245 aa20.48■□□□□ 0.87
PABPC1-215ENST00000520804 ARID5AQ03989 594 aa20.48■□□□□ 0.87
PABPC1-215ENST00000520804 CETN1Q12798 172 aa20.48■□□□□ 0.87
PABPC1-215ENST00000520804 STILQ15468 1287 aa20.48■□□□□ 0.87
PABPC1-215ENST00000520804 KLHL10Q6JEL2 608 aa20.48■□□□□ 0.87
PABPC1-215ENST00000520804 FOXR2Q6PJQ5 311 aa20.48■□□□□ 0.87
PABPC1-215ENST00000520804 SERPINA13PQ6UXR4 307 aa20.48■□□□□ 0.87
PABPC1-215ENST00000520804 CADM4Q8NFZ8 388 aa20.48■□□□□ 0.87
PABPC1-215ENST00000520804 OR2I1PQ8NGU4 316 aa20.48■□□□□ 0.87
PABPC1-215ENST00000520804 WFIKKN2Q8TEU8 576 aa20.48■□□□□ 0.87
PABPC1-215ENST00000520804 DNASE2BQ8WZ79 361 aa20.48■□□□□ 0.87
PABPC1-215ENST00000520804 TMA16Q96EY4 203 aaKnown RBP20.48■□□□□ 0.87
PABPC1-215ENST00000520804 GPR174Q9BXC1 333 aa20.48■□□□□ 0.87
PABPC1-215ENST00000520804 DNAAF2Q9NVR5 837 aaKnown RBP20.48■□□□□ 0.87
PABPC1-215ENST00000520804 PPP1R3GB7ZBB8 358 aa20.47■□□□□ 0.87
PABPC1-215ENST00000520804 M0QYV0 167 aa20.47■□□□□ 0.87
PABPC1-215ENST00000520804 PIK3R2O00459 728 aa20.47■□□□□ 0.87
PABPC1-215ENST00000520804 IGLV3-27P01718 113 aa20.47■□□□□ 0.87
PABPC1-215ENST00000520804 SPINK2P20155 84 aa20.47■□□□□ 0.87
PABPC1-215ENST00000520804 BRD2P25440 801 aaKnown RBP20.47■□□□□ 0.87
PABPC1-215ENST00000520804 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.47■□□□□ 0.87
PABPC1-215ENST00000520804 NELFBQ8WX92 580 aa20.47■□□□□ 0.87
PABPC1-215ENST00000520804 HSFY1Q96LI6 401 aa20.47■□□□□ 0.87
PABPC1-215ENST00000520804 ADAM33Q9BZ11 813 aa20.47■□□□□ 0.87
PABPC1-215ENST00000520804 NFE2L3Q9Y4A8 694 aa20.47■□□□□ 0.87
PABPC1-215ENST00000520804 USP24Q9UPU5 2620 aa20.47■□□□□ 0.87
PABPC1-215ENST00000520804 SPAARA0A1B0GVQ0 90 aa20.46■□□□□ 0.87
PABPC1-215ENST00000520804 MEI4A8MW99 385 aa20.46■□□□□ 0.87
PABPC1-215ENST00000520804 C1QTNF9BB2RNN3 333 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms