RNA–Protein interactions for RNA: ENST00000520776.5

EFCAB13-208, Transcript of EF-hand calcium binding domain 13, human

TSL 2

Gene EFCAB13, Length 1,979 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFCAB13-208	ENST00000520776	NR2F6	P10588	404 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	MMP8	P22894	467 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	BDNF	P23560	247 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	ADRA1D	P25100	572 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	MCM2	P49736	904 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	FOXL2	P58012	376 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	PSG6	Q00889	435 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	FAM187B	Q17R55	369 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	CTXN3	Q4LDR2	81 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	HYI	Q5T013	277 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	SLC9C2	Q5TAH2	1124 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	WDR78	Q5VTH9	848 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	PTCHD4	Q6ZW05	846 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	PARS2	Q7L3T8	475 aa	Known RBP	4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	RSRC2	Q7L4I2	434 aa	Known RBP	4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	USP38	Q8NB14	1042 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	RP9	Q8TA86	221 aa	Known RBP	4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	TFAP2B	Q92481	460 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	PBK	Q96KB5	322 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	LENG8	Q96PV6	779 aa	Predicted RBP	4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	HERC2P3	Q9BVR0	1158 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	ZHX3	Q9H4I2	956 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	SERTAD4	Q9NUC0	356 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	DLL3	Q9NYJ7	618 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	FBXO9	Q9UK97	447 aa	Predicted RBP	4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	RAB21	Q9UL25	225 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	SLC12A4	Q9UP95	1085 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	UBE2J1	Q9Y385	318 aa	Predicted RBP	4	□□□□□ -1.77
EFCAB13-208	ENST00000520776		B4E171	279 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	RAMP2	O60895	175 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	CYP3A4	P08684	503 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	TSPAN7	P41732	249 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	ANKRD1	Q15327	319 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	ANKRD40	Q6AI12	368 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	SIRT6	Q8N6T7	355 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	TSPYL6	Q8N831	410 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	PNPLA1	Q8N8W4	532 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	SLC2A12	Q8TD20	617 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	TRMT61A	Q96FX7	289 aa	Known RBP	4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	AGXT2	Q9BYV1	514 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	GPR63	Q9BZJ6	419 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	JMJD4	Q9H9V9	463 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	ARHGEF3	Q9NR81	526 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	TRPC5	Q9UL62	973 aa	Predicted RBP	4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	PCDHB2	Q9Y5E7	798 aa		4	□□□□□ -1.77
EFCAB13-208	ENST00000520776	COL4A3	Q01955	1670 aa		3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	AGAP5	A6NIR3	686 aa		3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	CES2	O00748	559 aa		3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	NXPH3	O95157	252 aa		3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	CHN1	P15882	459 aa		3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	IGHMBP2	P38935	993 aa	Known RBP	3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	DIO1	P49895	249 aa		3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	WDR45B	Q5MNZ6	344 aa		3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	ATG16L1	Q676U5	607 aa		3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	FAM180B	Q6P0A1	224 aa		3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	TBC1D1	Q86TI0	1168 aa	Predicted RBP	3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	P3H2	Q8IVL5	708 aa		3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	FAM71D	Q8N9W8	422 aa		3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	LINS1	Q8NG48	757 aa		3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	PROKR1	Q8TCW9	393 aa		3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	GLMP	Q8WWB7	406 aa		3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	FAR2	Q96K12	515 aa		3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	THAP7	Q9BT49	309 aa	Predicted RBP	3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	PREB	Q9HCU5	417 aa		3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	DUSP22	Q9NRW4	184 aa		3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	SMC4	Q9NTJ3	1288 aa		3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	TMLHE	Q9NVH6	421 aa		3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	AMFR	Q9UKV5	643 aa		3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	BAG5	Q9UL15	447 aa		3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	AFG3L2	Q9Y4W6	797 aa		3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	MAST3	O60307	1309 aa		3.99	□□□□□ -1.77
EFCAB13-208	ENST00000520776	MBD3L5	A6NJ08	208 aa	Predicted RBP	3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	SAC3D1	A6NKF1	404 aa		3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	FOXN1	O15353	648 aa		3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	PRAMEF2	O60811	474 aa		3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	DLD	P09622	509 aa	Known RBP	3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	ELFN1	P0C7U0	828 aa		3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	TMIGD3	P0DMS9	266 aa	Predicted RBP	3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	CAPN3	P20807	821 aa		3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	TPTE	P56180	551 aa		3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	SUMO2	P61956	95 aa	Known RBP	3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	NBPF8	Q3BBV2	869 aa		3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	TBC1D25	Q3MII6	688 aa		3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	LY6G5C	Q5SRR4	150 aa		3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	KAZN	Q674X7	775 aa		3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	KCNV1	Q6PIU1	500 aa		3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	PCSK4	Q6UW60	755 aa		3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776		Q6ZNX1	250 aa		3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	ZNF551	Q7Z340	670 aa	Predicted RBP	3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	PTGR2	Q8N8N7	351 aa	Predicted RBP	3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	FSIP1	Q8NA03	581 aa		3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	CLEC4C	Q8WTT0	213 aa		3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	ST8SIA4	Q92187	359 aa		3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	KAZALD1	Q96I82	304 aa		3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	NPAS1	Q99742	590 aa		3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	PAIP1	Q9H074	479 aa	Known RBP	3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	SYBU	Q9NX95	663 aa		3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	CCNL1	Q9UK58	526 aa	Predicted RBP	3.98	□□□□□ -1.77
EFCAB13-208	ENST00000520776	ITIH6	Q6UXX5	1313 aa		3.98	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms