RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 MGARPQ8TDB4 240 aa8.92□□□□□ -0.98
SHPRH-208ENST00000520752 PPP4R1Q8TF05 950 aa8.92□□□□□ -0.98
SHPRH-208ENST00000520752 CYB5D2Q8WUJ1 264 aa8.92□□□□□ -0.98
SHPRH-208ENST00000520752 ARMC5Q96C12 935 aa8.92□□□□□ -0.98
SHPRH-208ENST00000520752 MTBPQ96DY7 904 aa8.92□□□□□ -0.98
SHPRH-208ENST00000520752 HES6Q96HZ4 224 aa8.92□□□□□ -0.98
SHPRH-208ENST00000520752 CCDC74BQ96LY2 380 aa8.92□□□□□ -0.98
SHPRH-208ENST00000520752 FBXL18Q96ME1 805 aa8.92□□□□□ -0.98
SHPRH-208ENST00000520752 NLRP4Q96MN2 994 aa8.92□□□□□ -0.98
SHPRH-208ENST00000520752 RMDN3Q96TC7 470 aa8.92□□□□□ -0.98
SHPRH-208ENST00000520752 CIB1Q99828 191 aa8.92□□□□□ -0.98
SHPRH-208ENST00000520752 DBNDD2Q9BQY9 259 aa8.92□□□□□ -0.98
SHPRH-208ENST00000520752 DUSP23Q9BVJ7 150 aa8.92□□□□□ -0.98
SHPRH-208ENST00000520752 FOXP3Q9BZS1 431 aa8.92□□□□□ -0.98
SHPRH-208ENST00000520752 RMND5AQ9H871 391 aa8.92□□□□□ -0.98
SHPRH-208ENST00000520752 DDX56Q9NY93 547 aaKnown RBP8.92□□□□□ -0.98
SHPRH-208ENST00000520752 C9orf78Q9NZ63 289 aaPredicted RBP8.92□□□□□ -0.98
SHPRH-208ENST00000520752 VPS54Q9P1Q0 977 aa8.92□□□□□ -0.98
SHPRH-208ENST00000520752 CEP72Q9P209 647 aa8.92□□□□□ -0.98
SHPRH-208ENST00000520752 ARMCX3Q9UH62 379 aaPredicted RBP8.92□□□□□ -0.98
SHPRH-208ENST00000520752 PCYOX1Q9UHG3 505 aa8.92□□□□□ -0.98
SHPRH-208ENST00000520752 DBR1Q9UK59 544 aaKnown RBP8.92□□□□□ -0.98
SHPRH-208ENST00000520752 CNOT11Q9UKZ1 510 aaKnown RBP8.92□□□□□ -0.98
SHPRH-208ENST00000520752 VANGL2Q9ULK5 521 aa8.92□□□□□ -0.98
SHPRH-208ENST00000520752 SORCS3Q9UPU3 1222 aa8.92□□□□□ -0.98
SHPRH-208ENST00000520752 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.92□□□□□ -0.98
SHPRH-208ENST00000520752 DTNAQ9Y4J8 743 aa8.92□□□□□ -0.98
SHPRH-208ENST00000520752 PCDHB6Q9Y5E3 794 aa8.92□□□□□ -0.98
SHPRH-208ENST00000520752 PCDHGB3Q9Y5G1 929 aa8.92□□□□□ -0.98
SHPRH-208ENST00000520752 UTYO14607 1347 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 MAST3O60307 1309 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 XDHP47989 1333 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 LINC00854A0A1B0GVQ3 168 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 TRIM64BA6NI03 449 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 H3BSA7 217 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 CLOCKO15516 846 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 ZNF254O75437 659 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 IDH1O75874 414 aaKnown RBP8.91□□□□□ -0.98
SHPRH-208ENST00000520752 SLITRK5O94991 958 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 IGLV1-40P01703 118 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 NTRK1P04629 796 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 CYP1A2P05177 515 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 ABHD2P08910 425 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 FAM228BP0C875 321 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 SRGAP2CP0DJJ0 459 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 THRAP10827 490 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 KRT5P13647 590 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 FSTP19883 344 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 TCEA1P23193 301 aaKnown RBP8.91□□□□□ -0.98
SHPRH-208ENST00000520752 PPP2R2BQ00005 443 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 ECT2LQ008S8 904 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 RRP1BQ14684 758 aaKnown RBP8.91□□□□□ -0.98
SHPRH-208ENST00000520752 PPP2R5BQ15173 497 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 LSM12Q3MHD2 195 aaKnown RBP8.91□□□□□ -0.98
SHPRH-208ENST00000520752 ZBED5Q49AG3 693 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 TIGD2Q4W5G0 525 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 SYDE1Q6ZW31 735 aaPredicted RBP8.91□□□□□ -0.98
SHPRH-208ENST00000520752 CYP4V2Q6ZWL3 525 aaPredicted RBP8.91□□□□□ -0.98
SHPRH-208ENST00000520752 RALYLQ86SE5 291 aaKnown RBP8.91□□□□□ -0.98
SHPRH-208ENST00000520752 TDRPQ86YL5 185 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 GIMAP8Q8ND71 665 aaPredicted RBP8.91□□□□□ -0.98
SHPRH-208ENST00000520752 ADCY4Q8NFM4 1077 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 DENND1AQ8TEH3 1009 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 GDPD5Q8WTR4 605 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 ANKRD49Q8WVL7 239 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 ART4Q93070 314 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 P2RX5Q93086 422 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 TAMM41Q96BW9 452 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 RANBP9Q96S59 729 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 MYD88Q99836 296 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 DPH2Q9BQC3 489 aaPredicted RBP8.91□□□□□ -0.98
SHPRH-208ENST00000520752 C1orf50Q9BV19 199 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 INO80BQ9C086 356 aaPredicted RBP8.91□□□□□ -0.98
SHPRH-208ENST00000520752 OR2B2Q9GZK3 357 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 KLHL25Q9H0H3 589 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 CDH19Q9H159 772 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 SERHL2Q9H4I8 314 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 SMARCAD1Q9H4L7 1026 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 MAGEE1Q9HCI5 957 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 C12orf4Q9NQ89 552 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 ARL8BQ9NVJ2 186 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 BCAP29Q9UHQ4 241 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 PTBP2Q9UKA9 531 aaKnown RBP8.91□□□□□ -0.98
SHPRH-208ENST00000520752 DNM3Q9UQ16 869 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 CFL2Q9Y281 166 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 NEU2Q9Y3R4 380 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 SPEF1Q9Y4P9 236 aa8.91□□□□□ -0.98
SHPRH-208ENST00000520752 PTPRMP28827 1452 aa8.9□□□□□ -0.98
SHPRH-208ENST00000520752 ZMYM2Q9UBW7 1377 aa8.9□□□□□ -0.98
SHPRH-208ENST00000520752 MIF4GDA9UHW6 222 aaKnown RBP8.9□□□□□ -0.98
SHPRH-208ENST00000520752 POLR1CO15160 346 aaPredicted RBP8.9□□□□□ -0.98
SHPRH-208ENST00000520752 PLSCR1O15162 318 aa8.9□□□□□ -0.98
SHPRH-208ENST00000520752 NUAK1O60285 661 aa8.9□□□□□ -0.98
SHPRH-208ENST00000520752 CCNT2O60583 730 aaKnown RBP8.9□□□□□ -0.98
SHPRH-208ENST00000520752 SNAP91O60641 907 aa8.9□□□□□ -0.98
SHPRH-208ENST00000520752 TMCC2O75069 709 aa8.9□□□□□ -0.98
SHPRH-208ENST00000520752 MTA2O94776 668 aa8.9□□□□□ -0.98
SHPRH-208ENST00000520752 RHOBTB3O94955 611 aa8.9□□□□□ -0.98
SHPRH-208ENST00000520752 FGAP02671 866 aa8.9□□□□□ -0.98
SHPRH-208ENST00000520752 PLEKP08567 350 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms