RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 UPK3BL2E5RIL1 263 aa15.84■□□□□ 0.13
CSMD1-207ENST00000520451 MSI1O43347 362 aaKnown RBP15.84■□□□□ 0.13
CSMD1-207ENST00000520451 TOP3BO95985 862 aaKnown RBP15.84■□□□□ 0.13
CSMD1-207ENST00000520451 PROS1P07225 676 aa15.84■□□□□ 0.13
CSMD1-207ENST00000520451 SYPP08247 313 aa15.84■□□□□ 0.13
CSMD1-207ENST00000520451 LCP1P13796 627 aa15.84■□□□□ 0.13
CSMD1-207ENST00000520451 GNSP15586 552 aa15.84■□□□□ 0.13
CSMD1-207ENST00000520451 PRKCHP24723 683 aa15.84■□□□□ 0.13
CSMD1-207ENST00000520451 HOXD9P28356 352 aaPredicted RBP15.84■□□□□ 0.13
CSMD1-207ENST00000520451 FMO5P49326 533 aa15.84■□□□□ 0.13
CSMD1-207ENST00000520451 ARID5AQ03989 594 aa15.84■□□□□ 0.13
CSMD1-207ENST00000520451 PLEKHG6Q3KR16 790 aa15.84■□□□□ 0.13
CSMD1-207ENST00000520451 CCDC40Q4G0X9 1142 aa15.84■□□□□ 0.13
CSMD1-207ENST00000520451 MPPE1Q53F39 396 aa15.84■□□□□ 0.13
CSMD1-207ENST00000520451 WDR45BQ5MNZ6 344 aa15.84■□□□□ 0.13
CSMD1-207ENST00000520451 ISM2Q6H9L7 571 aa15.84■□□□□ 0.13
CSMD1-207ENST00000520451 TMEM270Q6UE05 265 aa15.84■□□□□ 0.13
CSMD1-207ENST00000520451 UNQ6494/PRO21346Q6UXR6 183 aa15.84■□□□□ 0.13
CSMD1-207ENST00000520451 METTL3Q86U44 580 aaKnown RBP15.84■□□□□ 0.13
CSMD1-207ENST00000520451 CACUL1Q86Y37 369 aa15.84■□□□□ 0.13
CSMD1-207ENST00000520451 TMPRSS6Q8IU80 811 aa15.84■□□□□ 0.13
CSMD1-207ENST00000520451 KCTD13Q8WZ19 329 aa15.84■□□□□ 0.13
CSMD1-207ENST00000520451 SIPA1Q96FS4 1042 aa15.84■□□□□ 0.13
CSMD1-207ENST00000520451 TOE1Q96GM8 510 aaKnown RBP15.84■□□□□ 0.13
CSMD1-207ENST00000520451 NT5C1BQ96P26 610 aa15.84■□□□□ 0.13
CSMD1-207ENST00000520451 CNGB3Q9NQW8 809 aa15.84■□□□□ 0.13
CSMD1-207ENST00000520451 PCDHB4Q9Y5E5 795 aa15.84■□□□□ 0.13
CSMD1-207ENST00000520451 CACNA1EQ15878 2313 aa15.83■□□□□ 0.12
CSMD1-207ENST00000520451 SPAARA0A1B0GVQ0 90 aa15.83■□□□□ 0.12
CSMD1-207ENST00000520451 C1QTNF9BB2RNN3 333 aa15.83■□□□□ 0.12
CSMD1-207ENST00000520451 TIMM44O43615 452 aa15.83■□□□□ 0.12
CSMD1-207ENST00000520451 EPHX1P07099 455 aa15.83■□□□□ 0.12
CSMD1-207ENST00000520451 PAEPP09466 180 aa15.83■□□□□ 0.12
CSMD1-207ENST00000520451 C1QTNF9P0C862 333 aa15.83■□□□□ 0.12
CSMD1-207ENST00000520451 NCAM1P13591 858 aa15.83■□□□□ 0.12
CSMD1-207ENST00000520451 MAOBP27338 520 aa15.83■□□□□ 0.12
CSMD1-207ENST00000520451 RGS7P49802 495 aa15.83■□□□□ 0.12
CSMD1-207ENST00000520451 DAOAP59103 153 aa15.83■□□□□ 0.12
CSMD1-207ENST00000520451 SIM1P81133 766 aaPredicted RBP15.83■□□□□ 0.12
CSMD1-207ENST00000520451 PKDCCQ504Y2 493 aa15.83■□□□□ 0.12
CSMD1-207ENST00000520451 TMEM215Q68D42 235 aa15.83■□□□□ 0.12
CSMD1-207ENST00000520451 LCLAT1Q6UWP7 414 aa15.83■□□□□ 0.12
CSMD1-207ENST00000520451 SERPINA13PQ6UXR4 307 aa15.83■□□□□ 0.12
CSMD1-207ENST00000520451 RBBP8NLQ8NC74 664 aaPredicted RBP15.83■□□□□ 0.12
CSMD1-207ENST00000520451 TFAP2BQ92481 460 aa15.83■□□□□ 0.12
CSMD1-207ENST00000520451 PRCCQ92733 491 aaPredicted RBP15.83■□□□□ 0.12
CSMD1-207ENST00000520451 DHTKD1Q96HY7 919 aaPredicted RBP15.83■□□□□ 0.12
CSMD1-207ENST00000520451 CEP63Q96MT8 703 aa15.83■□□□□ 0.12
CSMD1-207ENST00000520451 TIGD1Q96MW7 591 aa15.83■□□□□ 0.12
CSMD1-207ENST00000520451 SCNM1Q9BWG6 230 aa15.83■□□□□ 0.12
CSMD1-207ENST00000520451 GPR174Q9BXC1 333 aa15.83■□□□□ 0.12
CSMD1-207ENST00000520451 ADAM33Q9BZ11 813 aa15.83■□□□□ 0.12
CSMD1-207ENST00000520451 ITM2CQ9NQX7 267 aa15.83■□□□□ 0.12
CSMD1-207ENST00000520451 ABCC13Q9NSE7 274 aa15.83■□□□□ 0.12
CSMD1-207ENST00000520451 WSB2Q9NYS7 404 aaPredicted RBP15.83■□□□□ 0.12
CSMD1-207ENST00000520451 PCDH15Q96QU1 1955 aa15.83■□□□□ 0.12
CSMD1-207ENST00000520451 ASPMQ8IZT6 3477 aa15.83■□□□□ 0.12
CSMD1-207ENST00000520451 ADAMTS9Q9P2N4 1935 aa15.82■□□□□ 0.12
CSMD1-207ENST00000520451 KCNJ18B7U540 433 aa15.82■□□□□ 0.12
CSMD1-207ENST00000520451 M0QYV0 167 aa15.82■□□□□ 0.12
CSMD1-207ENST00000520451 PIK3R2O00459 728 aa15.82■□□□□ 0.12
CSMD1-207ENST00000520451 LATS1O95835 1130 aa15.82■□□□□ 0.12
CSMD1-207ENST00000520451 ACADMP11310 421 aa15.82■□□□□ 0.12
CSMD1-207ENST00000520451 CD44P16070 742 aaKnown RBP15.82■□□□□ 0.12
CSMD1-207ENST00000520451 OXTRP30559 389 aa15.82■□□□□ 0.12
CSMD1-207ENST00000520451 TPMTP51580 245 aa15.82■□□□□ 0.12
CSMD1-207ENST00000520451 COPAP53621 1224 aa15.82■□□□□ 0.12
CSMD1-207ENST00000520451 ZNF445P59923 1031 aa15.82■□□□□ 0.12
CSMD1-207ENST00000520451 NUCB2P80303 420 aa15.82■□□□□ 0.12
CSMD1-207ENST00000520451 BECN1Q14457 450 aa15.82■□□□□ 0.12
CSMD1-207ENST00000520451 FNDC3BQ53EP0 1204 aaKnown RBP15.82■□□□□ 0.12
CSMD1-207ENST00000520451 ADGRF1Q5T601 910 aa15.82■□□□□ 0.12
CSMD1-207ENST00000520451 KLHL10Q6JEL2 608 aa15.82■□□□□ 0.12
CSMD1-207ENST00000520451 PMF1Q6P1K2 205 aa15.82■□□□□ 0.12
CSMD1-207ENST00000520451 SCML4Q8N228 414 aa15.82■□□□□ 0.12
CSMD1-207ENST00000520451 PPM1KQ8N3J5 372 aa15.82■□□□□ 0.12
CSMD1-207ENST00000520451 KAT5Q92993 513 aa15.82■□□□□ 0.12
CSMD1-207ENST00000520451 TMA16Q96EY4 203 aaKnown RBP15.82■□□□□ 0.12
CSMD1-207ENST00000520451 STOML2Q9UJZ1 356 aa15.82■□□□□ 0.12
CSMD1-207ENST00000520451 MAN1B1Q9UKM7 699 aa15.82■□□□□ 0.12
CSMD1-207ENST00000520451 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.82■□□□□ 0.12
CSMD1-207ENST00000520451 RNF225M0QZC1 329 aaPredicted RBP15.81■□□□□ 0.12
CSMD1-207ENST00000520451 PMM2O15305 246 aa15.81■□□□□ 0.12
CSMD1-207ENST00000520451 HLA-EP13747 358 aa15.81■□□□□ 0.12
CSMD1-207ENST00000520451 BRD2P25440 801 aaKnown RBP15.81■□□□□ 0.12
CSMD1-207ENST00000520451 HLA-FP30511 346 aa15.81■□□□□ 0.12
CSMD1-207ENST00000520451 CETN1Q12798 172 aa15.81■□□□□ 0.12
CSMD1-207ENST00000520451 CNGA2Q16280 664 aa15.81■□□□□ 0.12
CSMD1-207ENST00000520451 MSANTD2Q6P1R3 559 aa15.81■□□□□ 0.12
CSMD1-207ENST00000520451 ZCCHC9Q8N567 271 aaKnown RBP15.81■□□□□ 0.12
CSMD1-207ENST00000520451 CADM4Q8NFZ8 388 aa15.81■□□□□ 0.12
CSMD1-207ENST00000520451 WFIKKN2Q8TEU8 576 aa15.81■□□□□ 0.12
CSMD1-207ENST00000520451 CYB5D2Q8WUJ1 264 aa15.81■□□□□ 0.12
CSMD1-207ENST00000520451 SLC35F5Q8WV83 523 aa15.81■□□□□ 0.12
CSMD1-207ENST00000520451 ZSWIM1Q9BR11 485 aa15.81■□□□□ 0.12
CSMD1-207ENST00000520451 MIR1-1HGQ9H1L0 117 aa15.81■□□□□ 0.12
CSMD1-207ENST00000520451 ABCB8Q9NUT2 735 aa15.81■□□□□ 0.12
CSMD1-207ENST00000520451 DNAAF2Q9NVR5 837 aaKnown RBP15.81■□□□□ 0.12
CSMD1-207ENST00000520451 GTF3C3Q9Y5Q9 886 aa15.81■□□□□ 0.12
CSMD1-207ENST00000520451 A0A1B0GTW7 788 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms