RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 ATG7O95352 703 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 MT-CO1P00395 513 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 ENO2P09104 434 aaPredicted RBP8.91□□□□□ -0.98
CSMD1-206ENST00000520002 RFX3P48380 749 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 STX5Q13190 355 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 BMPR2Q13873 1038 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 EML3Q32P44 896 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 DHFR2Q86XF0 187 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 DNAAF5Q86Y56 855 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 GALNT6Q8NCL4 622 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 PROX1Q92786 737 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 ZSWIM1Q9BR11 485 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 MTG1Q9BT17 334 aaPredicted RBP8.91□□□□□ -0.98
CSMD1-206ENST00000520002 TBC1D10AQ9BXI6 508 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 ABI2Q9NYB9 513 aaPredicted RBP8.91□□□□□ -0.98
CSMD1-206ENST00000520002 SLC9A8Q9Y2E8 581 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 PRIM2P49643 509 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 FAM83EQ2M2I3 478 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 ALFQ53S48 1182 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 C11orf63Q6NUN7 778 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 TMEM26Q6ZUK4 368 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 MICALL2Q8IY33 904 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 CACTIN-AS1Q8N1I8 211 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 CNPY3Q9BT09 278 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 GTF2A1LQ9UNN4 478 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 TNPO2O14787 897 aaKnown RBP8.91□□□□□ -0.98
CSMD1-206ENST00000520002 MAP3K6O95382 1288 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 PROCP04070 461 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 RBP3P10745 1247 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 DHDDSQ86SQ9 333 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 FNIP1Q8TF40 1166 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 ANKS1AQ92625 1134 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 MARK4Q96L34 752 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 THAP2Q9H0W7 228 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 RNF181Q9P0P0 153 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 CRLS1Q9UJA2 301 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 SYNPO2Q9UMS6 1093 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 ADGRB3O60242 1522 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 CHRM3P20309 590 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 CDH18Q13634 790 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 TTI2Q6NXR4 508 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 ERICH5Q6P6B1 374 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 EPHX4Q8IUS5 362 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 C10orf53Q8N6V4 93 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 KAT2BQ92831 832 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 SCAF8Q9UPN6 1271 aaKnown RBP8.91□□□□□ -0.98
CSMD1-206ENST00000520002 C6orf222P0C671 652 aaPredicted RBP8.91□□□□□ -0.98
CSMD1-206ENST00000520002 MLNP12872 115 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 RPS7P62081 194 aaKnown RBP8.91□□□□□ -0.98
CSMD1-206ENST00000520002 USF2Q15853 346 aaPredicted RBP8.91□□□□□ -0.98
CSMD1-206ENST00000520002 CACHD1Q5VU97 1274 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 MZT2BQ6NZ67 158 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 IZUMO1Q8IYV9 350 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 FEZF2Q8TBJ5 459 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 UNKQ9C0B0 810 aaKnown RBP8.91□□□□□ -0.98
CSMD1-206ENST00000520002 PACSIN3Q9UKS6 424 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 GRID1Q9ULK0 1009 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 SETBP1Q9Y6X0 1596 aa8.91□□□□□ -0.98
CSMD1-206ENST00000520002 PPP1R3GB7ZBB8 358 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 PCSK1P29120 753 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 FNTAP49354 379 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 ST8SIA6P61647 398 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 SKIV2LQ15477 1246 aaKnown RBP8.9□□□□□ -0.98
CSMD1-206ENST00000520002 QPCTQ16769 361 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 SHROOM1Q2M3G4 852 aaPredicted RBP8.9□□□□□ -0.98
CSMD1-206ENST00000520002 PTPRHQ9HD43 1115 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 KLHL1Q9NR64 748 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 TBX20Q9UMR3 447 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 CDC40O60508 579 aaKnown RBP eCLIP8.9□□□□□ -0.98
CSMD1-206ENST00000520002 ADRA2BP18089 450 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 DDX39BQ13838 428 aaKnown RBP8.9□□□□□ -0.98
CSMD1-206ENST00000520002 PAPD7Q5XG87 772 aaKnown RBP8.9□□□□□ -0.98
CSMD1-206ENST00000520002 KRT77Q7Z794 578 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 SLCO6A1Q86UG4 719 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 FBXO25Q8TCJ0 367 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 ISCA1Q9BUE6 129 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 UBXN6Q9BZV1 441 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 WDR37Q9Y2I8 494 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 SH3BP1Q9Y3L3 701 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 MTRF1O75570 445 aaKnown RBP8.9□□□□□ -0.98
CSMD1-206ENST00000520002 CCNCP24863 283 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 SEPHS1P49903 392 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 HSF2Q03933 536 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 CCSAPQ6IQ19 270 aaPredicted RBP8.9□□□□□ -0.98
CSMD1-206ENST00000520002 SATL1Q86VE3 508 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 FBXO36Q8NEA4 188 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 RAET1EQ8TD07 263 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 EFCAB10A6NFE3 127 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 SLC26A4O43511 780 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 CCNT2O60583 730 aaKnown RBP8.9□□□□□ -0.98
CSMD1-206ENST00000520002 SHBGP04278 402 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 KCTD4Q8WVF5 259 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 LPAR1Q92633 364 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 NUDT12Q9BQG2 462 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 A0A0G2JLW4 131 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 CHRNA5P30532 468 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 CHI3L1P36222 383 aaPredicted RBP8.9□□□□□ -0.98
CSMD1-206ENST00000520002 NUMBP49757 651 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 SV2CQ496J9 727 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 C2CD6Q53TS8 623 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms