RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 MAPK8P45983 427 aa12.99□□□□□ -0.33
CSMD1-205ENST00000519623 HARS2P49590 506 aaKnown RBP12.99□□□□□ -0.33
CSMD1-205ENST00000519623 RGS7P49802 495 aa12.99□□□□□ -0.33
CSMD1-205ENST00000519623 ZNF132P52740 706 aa12.99□□□□□ -0.33
CSMD1-205ENST00000519623 MORC3Q14149 939 aa12.99□□□□□ -0.33
CSMD1-205ENST00000519623 ZNF234Q14588 700 aa12.99□□□□□ -0.33
CSMD1-205ENST00000519623 MPPE1Q53F39 396 aa12.99□□□□□ -0.33
CSMD1-205ENST00000519623 ADGRF1Q5T601 910 aa12.99□□□□□ -0.33
CSMD1-205ENST00000519623 KLHL10Q6JEL2 608 aa12.99□□□□□ -0.33
CSMD1-205ENST00000519623 ANKS1BQ7Z6G8 1248 aa12.99□□□□□ -0.33
CSMD1-205ENST00000519623 SIX6OS1Q8N1H7 587 aa12.99□□□□□ -0.33
CSMD1-205ENST00000519623 TRIML1Q8N9V2 468 aa12.99□□□□□ -0.33
CSMD1-205ENST00000519623 EHBP1Q8NDI1 1231 aa12.99□□□□□ -0.33
CSMD1-205ENST00000519623 RNF139Q8WU17 664 aa12.99□□□□□ -0.33
CSMD1-205ENST00000519623 UCMAQ8WVF2 138 aa12.99□□□□□ -0.33
CSMD1-205ENST00000519623 NELFBQ8WX92 580 aa12.99□□□□□ -0.33
CSMD1-205ENST00000519623 SORCS1Q8WY21 1168 aa12.99□□□□□ -0.33
CSMD1-205ENST00000519623 PRDM16Q9HAZ2 1276 aa12.99□□□□□ -0.33
CSMD1-205ENST00000519623 FSCN3Q9NQT6 498 aa12.99□□□□□ -0.33
CSMD1-205ENST00000519623 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.99□□□□□ -0.33
CSMD1-205ENST00000519623 CKAP5Q14008 2032 aa12.98□□□□□ -0.33
CSMD1-205ENST00000519623 PCDH15Q96QU1 1955 aa12.98□□□□□ -0.33
CSMD1-205ENST00000519623 MSI1O43347 362 aaKnown RBP12.98□□□□□ -0.33
CSMD1-205ENST00000519623 TSPAN3O60637 253 aa12.98□□□□□ -0.33
CSMD1-205ENST00000519623 GADD45BO75293 160 aaPredicted RBP12.98□□□□□ -0.33
CSMD1-205ENST00000519623 CFIP05156 583 aa12.98□□□□□ -0.33
CSMD1-205ENST00000519623 HLA-FP30511 346 aa12.98□□□□□ -0.33
CSMD1-205ENST00000519623 GFPT1Q06210 699 aaPredicted RBP12.98□□□□□ -0.33
CSMD1-205ENST00000519623 SEMA3BQ13214 749 aa12.98□□□□□ -0.33
CSMD1-205ENST00000519623 STARD3Q14849 445 aa12.98□□□□□ -0.33
CSMD1-205ENST00000519623 EIF4HQ15056 248 aaKnown RBP12.98□□□□□ -0.33
CSMD1-205ENST00000519623 CCDC40Q4G0X9 1142 aa12.98□□□□□ -0.33
CSMD1-205ENST00000519623 MSANTD2Q6P1R3 559 aa12.98□□□□□ -0.33
CSMD1-205ENST00000519623 KIAA1324Q6UXG2 1013 aaKnown RBP12.98□□□□□ -0.33
CSMD1-205ENST00000519623 RRAGAQ7L523 313 aa12.98□□□□□ -0.33
CSMD1-205ENST00000519623 KIAA0907Q7Z7F0 614 aaPredicted RBP12.98□□□□□ -0.33
CSMD1-205ENST00000519623 PIP4P1Q86T03 277 aa12.98□□□□□ -0.33
CSMD1-205ENST00000519623 TMPRSS6Q8IU80 811 aa12.98□□□□□ -0.33
CSMD1-205ENST00000519623 ARHGEF19Q8IW93 802 aa12.98□□□□□ -0.33
CSMD1-205ENST00000519623 TRIM59Q8IWR1 403 aa12.98□□□□□ -0.33
CSMD1-205ENST00000519623 PPM1KQ8N3J5 372 aa12.98□□□□□ -0.33
CSMD1-205ENST00000519623 DEFB124Q8NES8 71 aa12.98□□□□□ -0.33
CSMD1-205ENST00000519623 IRGQQ8WZA9 623 aa12.98□□□□□ -0.33
CSMD1-205ENST00000519623 TMA16Q96EY4 203 aaKnown RBP12.98□□□□□ -0.33
CSMD1-205ENST00000519623 HSFY1Q96LI6 401 aa12.98□□□□□ -0.33
CSMD1-205ENST00000519623 HSPA12BQ96MM6 686 aa12.98□□□□□ -0.33
CSMD1-205ENST00000519623 WSB2Q9NYS7 404 aaPredicted RBP12.98□□□□□ -0.33
CSMD1-205ENST00000519623 USP36Q9P275 1121 aaKnown RBP12.98□□□□□ -0.33
CSMD1-205ENST00000519623 UPK3BL1B0FP48 263 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 KCNJ18B7U540 433 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 UPK3BL2E5RIL1 263 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 PIK3R2O00459 728 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 ARHGAP33O14559 1287 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 NDUFS2O75306 463 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 LATS1O95835 1130 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 IGLV3-27P01718 113 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 NCAM1P13591 858 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 PRKCHP24723 683 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 BRD2P25440 801 aaKnown RBP12.97□□□□□ -0.33
CSMD1-205ENST00000519623 MAOBP27338 520 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 CD6P30203 668 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 TPMTP51580 245 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 COPAP53621 1224 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 GCNT1Q02742 428 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 ZNF252P-AS1Q0IIN9 211 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 CETN1Q12798 172 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 KCNH2Q12809 1159 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 E2F5Q15329 346 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 STILQ15468 1287 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 ST3GAL2Q16842 350 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 RABEPKQ7Z6M1 372 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 ADIPOR2Q86V24 386 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 CLEC4CQ8WTT0 213 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 DNASE2BQ8WZ79 361 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 FOXJ1Q92949 421 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 TOE1Q96GM8 510 aaKnown RBP12.97□□□□□ -0.33
CSMD1-205ENST00000519623 KREMEN1Q96MU8 473 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 CIPCQ9C0C6 399 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 CNTN6Q9UQ52 1028 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 KNL1Q8NG31 2342 aa12.97□□□□□ -0.33
CSMD1-205ENST00000519623 GOLGA6L7A0A1B0GV03 622 aa12.96□□□□□ -0.33
CSMD1-205ENST00000519623 BICDL2A1A5D9 508 aa12.96□□□□□ -0.33
CSMD1-205ENST00000519623 M0QYV0 167 aa12.96□□□□□ -0.33
CSMD1-205ENST00000519623 BIN1O00499 593 aa12.96□□□□□ -0.33
CSMD1-205ENST00000519623 SYNCRIPO60506 623 aaKnown RBP12.96□□□□□ -0.33
CSMD1-205ENST00000519623 TOP3BO95985 862 aaKnown RBP12.96□□□□□ -0.33
CSMD1-205ENST00000519623 IGLV3-19P01714 112 aa12.96□□□□□ -0.33
CSMD1-205ENST00000519623 LTFP02788 710 aa12.96□□□□□ -0.33
CSMD1-205ENST00000519623 FYNP06241 537 aa12.96□□□□□ -0.33
CSMD1-205ENST00000519623 C7P10643 843 aa12.96□□□□□ -0.33
CSMD1-205ENST00000519623 RPL34P49207 117 aaKnown RBP12.96□□□□□ -0.33
CSMD1-205ENST00000519623 SGSHP51688 502 aa12.96□□□□□ -0.33
CSMD1-205ENST00000519623 MARSP56192 900 aaKnown RBP12.96□□□□□ -0.33
CSMD1-205ENST00000519623 STX17P56962 302 aa12.96□□□□□ -0.33
CSMD1-205ENST00000519623 ZNF445P59923 1031 aa12.96□□□□□ -0.33
CSMD1-205ENST00000519623 NUMA1Q14980 2115 aa12.96□□□□□ -0.33
CSMD1-205ENST00000519623 PIK3R6Q5UE93 754 aa12.96□□□□□ -0.33
CSMD1-205ENST00000519623 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.96□□□□□ -0.33
CSMD1-205ENST00000519623 OR2I1PQ8NGU4 316 aa12.96□□□□□ -0.33
CSMD1-205ENST00000519623 AZIN2Q96A70 460 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms