RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 NT5C1BQ96P26 610 aa11.36□□□□□ -0.59
PVT1-208ENST00000519481 ZDHHC5Q9C0B5 715 aa11.36□□□□□ -0.59
PVT1-208ENST00000519481 SLC6A17Q9H1V8 727 aa11.36□□□□□ -0.59
PVT1-208ENST00000519481 CAPN10Q9HC96 672 aa11.36□□□□□ -0.59
PVT1-208ENST00000519481 CD248Q9HCU0 757 aa11.36□□□□□ -0.59
PVT1-208ENST00000519481 CNGB3Q9NQW8 809 aa11.36□□□□□ -0.59
PVT1-208ENST00000519481 ITM2CQ9NQX7 267 aa11.36□□□□□ -0.59
PVT1-208ENST00000519481 H0Y626 953 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 TSPAN3O60637 253 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 TRIM16O95361 564 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 LATS1O95835 1130 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 EPHX1P07099 455 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 PAEPP09466 180 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 NCAM1P13591 858 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 LCP1P13796 627 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 FMO5P49326 533 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 SIM1P81133 766 aaPredicted RBP11.35□□□□□ -0.59
PVT1-208ENST00000519481 TMEM270Q6UE05 265 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 UNQ6494/PRO21346Q6UXR6 183 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 UNC45BQ8IWX7 931 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 FAM217AQ8IXS0 508 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 SCML4Q8N228 414 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 PPM1KQ8N3J5 372 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 ZNF557Q8N988 423 aaPredicted RBP11.35□□□□□ -0.59
PVT1-208ENST00000519481 CADM4Q8NFZ8 388 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 EDEM1Q92611 657 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 SLC35C1Q96A29 364 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 DHTKD1Q96HY7 919 aaPredicted RBP11.35□□□□□ -0.59
PVT1-208ENST00000519481 PIWIL1Q96J94 861 aaKnown RBP11.35□□□□□ -0.59
PVT1-208ENST00000519481 CEP63Q96MT8 703 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 TIGD1Q96MW7 591 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 NUP58Q9BVL2 599 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 GPR174Q9BXC1 333 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 ADAM33Q9BZ11 813 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 FSCN3Q9NQT6 498 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 WSB2Q9NYS7 404 aaPredicted RBP11.35□□□□□ -0.59
PVT1-208ENST00000519481 USP36Q9P275 1121 aaKnown RBP11.35□□□□□ -0.59
PVT1-208ENST00000519481 SFMBT1Q9UHJ3 866 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 PLA2G4CQ9UP65 541 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 NFE2L3Q9Y4A8 694 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 PCDHB9Q9Y5E1 797 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 PCDHB4Q9Y5E5 795 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 PCNX2A6NKB5 2137 aa11.35□□□□□ -0.59
PVT1-208ENST00000519481 USP24Q9UPU5 2620 aa11.34□□□□□ -0.59
PVT1-208ENST00000519481 A0A1B0GTW7 788 aa11.34□□□□□ -0.59
PVT1-208ENST00000519481 TYW5A2RUC4 315 aaKnown RBP11.34□□□□□ -0.59
PVT1-208ENST00000519481 TRIM49BA6NDI0 452 aa11.34□□□□□ -0.59
PVT1-208ENST00000519481 TMEM8BA6NDV4 472 aa11.34□□□□□ -0.59
PVT1-208ENST00000519481 YJEFN3A6XGL0 299 aa11.34□□□□□ -0.59
PVT1-208ENST00000519481 E7ENQ6 273 aa11.34□□□□□ -0.59
PVT1-208ENST00000519481 TULP2O00295 520 aa11.34□□□□□ -0.59
PVT1-208ENST00000519481 O00370 1275 aa11.34□□□□□ -0.59
PVT1-208ENST00000519481 ATP5BP06576 529 aaKnown RBP11.34□□□□□ -0.59
PVT1-208ENST00000519481 SLC11A2P49281 568 aa11.34□□□□□ -0.59
PVT1-208ENST00000519481 TPMTP51580 245 aa11.34□□□□□ -0.59
PVT1-208ENST00000519481 PMS1P54277 932 aaKnown RBP11.34□□□□□ -0.59
PVT1-208ENST00000519481 SLC14A1Q13336 389 aa11.34□□□□□ -0.59
PVT1-208ENST00000519481 ENPP2Q13822 863 aa11.34□□□□□ -0.59
PVT1-208ENST00000519481 FNDC3BQ53EP0 1204 aaKnown RBP11.34□□□□□ -0.59
PVT1-208ENST00000519481 ADGRF1Q5T601 910 aa11.34□□□□□ -0.59
PVT1-208ENST00000519481 NUGGCQ68CJ6 796 aa11.34□□□□□ -0.59
PVT1-208ENST00000519481 LCLAT1Q6UWP7 414 aa11.34□□□□□ -0.59
PVT1-208ENST00000519481 PIP4P1Q86T03 277 aa11.34□□□□□ -0.59
PVT1-208ENST00000519481 CCDC117Q8IWD4 279 aaPredicted RBP11.34□□□□□ -0.59
PVT1-208ENST00000519481 SPATA20Q8TB22 786 aa11.34□□□□□ -0.59
PVT1-208ENST00000519481 IRGQQ8WZA9 623 aa11.34□□□□□ -0.59
PVT1-208ENST00000519481 NDRG1Q92597 394 aaKnown RBP11.34□□□□□ -0.59
PVT1-208ENST00000519481 DDX50Q9BQ39 737 aaKnown RBP11.34□□□□□ -0.59
PVT1-208ENST00000519481 SCNM1Q9BWG6 230 aa11.34□□□□□ -0.59
PVT1-208ENST00000519481 IRX2Q9BZI1 471 aaPredicted RBP11.34□□□□□ -0.59
PVT1-208ENST00000519481 MKRN2Q9H000 416 aaKnown RBP11.34□□□□□ -0.59
PVT1-208ENST00000519481 MIR1-1HGQ9H1L0 117 aa11.34□□□□□ -0.59
PVT1-208ENST00000519481 DNAAF2Q9NVR5 837 aaKnown RBP11.34□□□□□ -0.59
PVT1-208ENST00000519481 CEP192Q8TEP8 1941 aa11.34□□□□□ -0.59
PVT1-208ENST00000519481 TNRC6BQ9UPQ9 1833 aaKnown RBP11.34□□□□□ -0.59
PVT1-208ENST00000519481 CACNA1EQ15878 2313 aa11.34□□□□□ -0.59
PVT1-208ENST00000519481 SPAARA0A1B0GVQ0 90 aa11.33□□□□□ -0.6
PVT1-208ENST00000519481 BICDL2A1A5D9 508 aa11.33□□□□□ -0.6
PVT1-208ENST00000519481 M0QYV0 167 aa11.33□□□□□ -0.6
PVT1-208ENST00000519481 PMM2O15305 246 aa11.33□□□□□ -0.6
PVT1-208ENST00000519481 P4HA2O15460 535 aa11.33□□□□□ -0.6
PVT1-208ENST00000519481 FBXO21O94952 628 aa11.33□□□□□ -0.6
PVT1-208ENST00000519481 SPINK2P20155 84 aa11.33□□□□□ -0.6
PVT1-208ENST00000519481 PRKCHP24723 683 aa11.33□□□□□ -0.6
PVT1-208ENST00000519481 MAOBP27338 520 aa11.33□□□□□ -0.6
PVT1-208ENST00000519481 HOXD9P28356 352 aaPredicted RBP11.33□□□□□ -0.6
PVT1-208ENST00000519481 RGS7P49802 495 aa11.33□□□□□ -0.6
PVT1-208ENST00000519481 DAOAP59103 153 aa11.33□□□□□ -0.6
PVT1-208ENST00000519481 CNGA2Q16280 664 aa11.33□□□□□ -0.6
PVT1-208ENST00000519481 ZNF423Q2M1K9 1284 aa11.33□□□□□ -0.6
PVT1-208ENST00000519481 KLHL10Q6JEL2 608 aa11.33□□□□□ -0.6
PVT1-208ENST00000519481 MSANTD2Q6P1R3 559 aa11.33□□□□□ -0.6
PVT1-208ENST00000519481 CHST9Q7L1S5 443 aa11.33□□□□□ -0.6
PVT1-208ENST00000519481 BHLHA9Q7RTU4 235 aa11.33□□□□□ -0.6
PVT1-208ENST00000519481 AHI1Q8N157 1196 aa11.33□□□□□ -0.6
PVT1-208ENST00000519481 ENGASEQ8NFI3 743 aa11.33□□□□□ -0.6
PVT1-208ENST00000519481 OR2T3Q8NH03 318 aa11.33□□□□□ -0.6
PVT1-208ENST00000519481 SORCS1Q8WY21 1168 aa11.33□□□□□ -0.6
PVT1-208ENST00000519481 DNASE2BQ8WZ79 361 aa11.33□□□□□ -0.6
PVT1-208ENST00000519481 ERCC4Q92889 916 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms