RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 USP3Q9Y6I4 520 aa7.92□□□□□ -1.14
SDCBP-206ENST00000519115 PIAS3Q9Y6X2 628 aa7.92□□□□□ -1.14
SDCBP-206ENST00000519115 TCRBV5S1A1TA0A578 114 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 CCDC66A2RUB6 948 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 GRID2IPA4D2P6 1211 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 TMEM191CA6NGB0 347 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 OTOL1A6NHN0 477 aaPredicted RBP7.91□□□□□ -1.14
SDCBP-206ENST00000519115 SHISA7A6NL88 538 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 YJEFN3A6XGL0 299 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 E7ENQ6 273 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 FBXO21O94952 628 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 ZBED1O96006 694 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 DCNP07585 359 aaKnown RBP7.91□□□□□ -1.14
SDCBP-206ENST00000519115 RALAP11233 206 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 RARGP13631 454 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 DESP17661 470 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 PFKLP17858 780 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 AOC1P19801 751 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 COL9A1P20849 921 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 TARSP26639 723 aaKnown RBP7.91□□□□□ -1.14
SDCBP-206ENST00000519115 AVPR2P30518 371 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 CTHP32929 405 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 NOP2P46087 812 aaKnown RBP7.91□□□□□ -1.14
SDCBP-206ENST00000519115 NAP1L1P55209 391 aaKnown RBP7.91□□□□□ -1.14
SDCBP-206ENST00000519115 STARD6P59095 220 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 YWHAGP61981 247 aaKnown RBP eCLIP7.91□□□□□ -1.14
SDCBP-206ENST00000519115 AMPD2Q01433 879 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 PRKCQQ04759 706 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 EFEMP1Q12805 493 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 MAMLD1Q13495 774 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 PIGHQ14442 188 aaPredicted RBP7.91□□□□□ -1.14
SDCBP-206ENST00000519115 RPS6KA1Q15418 735 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 ITPRIPL2Q3MIP1 535 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 PPP1R15BQ5SWA1 713 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 TAF3Q5VWG9 929 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 RSRC2Q7L4I2 434 aaKnown RBP7.91□□□□□ -1.14
SDCBP-206ENST00000519115 BHLHA9Q7RTU4 235 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 MIB1Q86YT6 1006 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 SLC35F6Q8N357 371 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 PJA1Q8NG27 643 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 CPA5Q8WXQ8 436 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 EDEM1Q92611 657 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 HES6Q96HZ4 224 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 SHDQ96IW2 340 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 NAP1L3Q99457 506 aaPredicted RBP7.91□□□□□ -1.14
SDCBP-206ENST00000519115 FAM83CQ9BQN1 747 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 DDX23Q9BUQ8 820 aaKnown RBP7.91□□□□□ -1.14
SDCBP-206ENST00000519115 TRIM62Q9BVG3 475 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 SELENOOQ9BVL4 669 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 THAP2Q9H0W7 228 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 CARD9Q9H257 536 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 LINC00597Q9H2U6 94 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 PRDM16Q9HAZ2 1276 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 LTB4R2Q9NPC1 389 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 TRPV5Q9NQA5 729 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 SEPT11Q9NVA2 429 aaKnown RBP7.91□□□□□ -1.14
SDCBP-206ENST00000519115 RRN3Q9NYV6 651 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 TAS2R14Q9NYV8 317 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 CTTNBP2NLQ9P2B4 639 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 TJP2Q9UDY2 1190 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 CNOT8Q9UFF9 292 aaKnown RBP7.91□□□□□ -1.14
SDCBP-206ENST00000519115 IP6K2Q9UHH9 426 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 CYTH4Q9UIA0 394 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 SALL4Q9UJQ4 1053 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.91□□□□□ -1.14
SDCBP-206ENST00000519115 MTF2Q9Y483 593 aaPredicted RBP7.91□□□□□ -1.14
SDCBP-206ENST00000519115 MRFAP1Q9Y605 127 aa7.91□□□□□ -1.14
SDCBP-206ENST00000519115 WDFY4Q6ZS81 3184 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 KANSL1LA0AUZ9 987 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 MACROD2A1Z1Q3 448 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 E5RJQ4 531 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 SPECC1L-ADORA2AF8WAN1 911 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 PALMO75781 387 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 PROSCO94903 275 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 HMBSP08397 361 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 TCF3P15923 654 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 CTNNA2P26232 953 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 ATP5C1P36542 298 aaKnown RBP7.9□□□□□ -1.14
SDCBP-206ENST00000519115 CLCN5P51795 746 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 DAOAP59103 153 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 CKAP4Q07065 602 aaKnown RBP7.9□□□□□ -1.14
SDCBP-206ENST00000519115 PDCLQ13371 301 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 RUNX3Q13761 415 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 PON2Q15165 354 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 PDGFRLQ15198 375 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 EML3Q32P44 896 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 NAA35Q5VZE5 725 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 BTBD8Q5XKL5 378 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 NAIF1Q69YI7 327 aaPredicted RBP7.9□□□□□ -1.14
SDCBP-206ENST00000519115 PM20D1Q6GTS8 502 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 TXNDC11Q6PKC3 985 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 PEX26Q7Z412 305 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 POLNQ7Z5Q5 900 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 DAAM2Q86T65 1068 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 NT5DC3Q86UY8 548 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 VSIG1Q86XK7 387 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 DDX42Q86XP3 938 aaKnown RBP eCLIP7.9□□□□□ -1.14
SDCBP-206ENST00000519115 CCDC105Q8IYK2 499 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 ARHGAP18Q8N392 663 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 CPA6Q8N4T0 437 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms