RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 SGSM1Q2NKQ1 1148 aa11.9□□□□□ -0.5
CTNNA1-205ENST00000517904 ZACNQ401N2 412 aa11.9□□□□□ -0.5
CTNNA1-205ENST00000517904 CCDC186Q7Z3E2 898 aa11.9□□□□□ -0.5
CTNNA1-205ENST00000517904 TMPRSS12Q86WS5 348 aa11.9□□□□□ -0.5
CTNNA1-205ENST00000517904 DENND1CQ8IV53 801 aa11.9□□□□□ -0.5
CTNNA1-205ENST00000517904 NAV2Q8IVL1 2488 aa11.9□□□□□ -0.5
CTNNA1-205ENST00000517904 DHX58Q96C10 678 aa11.9□□□□□ -0.5
CTNNA1-205ENST00000517904 CYFIP2Q96F07 1278 aa11.9□□□□□ -0.5
CTNNA1-205ENST00000517904 C7orf25Q9BPX7 421 aa11.9□□□□□ -0.5
CTNNA1-205ENST00000517904 TMEM245Q9H330 911 aa11.9□□□□□ -0.5
CTNNA1-205ENST00000517904 SLC39A2Q9NP94 309 aa11.9□□□□□ -0.5
CTNNA1-205ENST00000517904 CLIC5Q9NZA1 410 aa11.9□□□□□ -0.5
CTNNA1-205ENST00000517904 RAI2Q9Y5P3 530 aa11.9□□□□□ -0.5
CTNNA1-205ENST00000517904 USP3Q9Y6I4 520 aa11.9□□□□□ -0.5
CTNNA1-205ENST00000517904 COL5A1P20908 1838 aaPredicted RBP11.9□□□□□ -0.5
CTNNA1-205ENST00000517904 CBX4O00257 560 aa11.89□□□□□ -0.51
CTNNA1-205ENST00000517904 PAPSS1O43252 624 aaPredicted RBP11.89□□□□□ -0.51
CTNNA1-205ENST00000517904 SEMA4FO95754 770 aa11.89□□□□□ -0.51
CTNNA1-205ENST00000517904 ASS1P00966 412 aaKnown RBP11.89□□□□□ -0.51
CTNNA1-205ENST00000517904 P4HA1P13674 534 aa11.89□□□□□ -0.51
CTNNA1-205ENST00000517904 PLA2G2AP14555 144 aa11.89□□□□□ -0.51
CTNNA1-205ENST00000517904 SYT1P21579 422 aa11.89□□□□□ -0.51
CTNNA1-205ENST00000517904 COG7P83436 770 aa11.89□□□□□ -0.51
CTNNA1-205ENST00000517904 INCA1Q0VD86 236 aa11.89□□□□□ -0.51
CTNNA1-205ENST00000517904 CUL4AQ13619 759 aa11.89□□□□□ -0.51
CTNNA1-205ENST00000517904 KNOP1Q1ED39 458 aaKnown RBP11.89□□□□□ -0.51
CTNNA1-205ENST00000517904 PRAMEF14Q5SWL7 426 aa11.89□□□□□ -0.51
CTNNA1-205ENST00000517904 UNC13DQ70J99 1090 aa11.89□□□□□ -0.51
CTNNA1-205ENST00000517904 TADA2BQ86TJ2 420 aa11.89□□□□□ -0.51
CTNNA1-205ENST00000517904 GATAD2AQ86YP4 633 aa11.89□□□□□ -0.51
CTNNA1-205ENST00000517904 FAM217AQ8IXS0 508 aa11.89□□□□□ -0.51
CTNNA1-205ENST00000517904 DDI1Q8WTU0 396 aa11.89□□□□□ -0.51
CTNNA1-205ENST00000517904 CYB5D2Q8WUJ1 264 aa11.89□□□□□ -0.51
CTNNA1-205ENST00000517904 NXPE2Q96DL1 559 aa11.89□□□□□ -0.51
CTNNA1-205ENST00000517904 DCLK3Q9C098 648 aa11.89□□□□□ -0.51
CTNNA1-205ENST00000517904 BLZF1Q9H2G9 400 aa11.89□□□□□ -0.51
CTNNA1-205ENST00000517904 CUEDC2Q9H467 287 aa11.89□□□□□ -0.51
CTNNA1-205ENST00000517904 CGNQ9P2M7 1197 aaKnown RBP11.89□□□□□ -0.51
CTNNA1-205ENST00000517904 FTSJ1Q9UET6 329 aa11.89□□□□□ -0.51
CTNNA1-205ENST00000517904 MYO18BQ8IUG5 2567 aa11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 MYLKQ15746 1914 aa11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 A0A1B0GTQ1 180 aa11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 STX6O43752 255 aa11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 FSBPO95073 299 aa11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 CYBBP04839 570 aa11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 RPN1P04843 607 aaKnown RBP11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 IGHV4-34P06331 123 aa11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 RALAP11233 206 aa11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 PDCP20941 246 aa11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 CD27P26842 260 aa11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 HOXD9P28356 352 aaPredicted RBP11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 HLA-FP30511 346 aa11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 NASPP49321 788 aaPredicted RBP11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 RPS14P62263 151 aaKnown RBP11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 AMPD3Q01432 767 aa11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 SEMG2Q02383 582 aa11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 DNAJC3Q13217 504 aa11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 C1orf220Q5T0J3 134 aa11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 SV2AQ7L0J3 742 aa11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 ZC3H3Q8IXZ2 948 aaKnown RBP11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 CPXM2Q8N436 756 aa11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 LINC00301Q8NCQ3 95 aa11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 TAF4BQ92750 862 aa11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 FCRL3Q96P31 734 aaPredicted RBP11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 SLC2A11Q9BYW1 496 aa11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 BTBD1Q9H0C5 482 aa11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 APOBEC3GQ9HC16 384 aaKnown RBP11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 PRSS16Q9NQE7 514 aa11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 DMAC2Q9NW81 257 aa11.88□□□□□ -0.51
CTNNA1-205ENST00000517904 HECTD1Q9ULT8 2610 aa11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 TIMM44O43615 452 aa11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 KIF20AO95235 890 aa11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 HLA-DRAP01903 254 aa11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 BCAT1P54687 386 aa11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 ARID5AQ03989 594 aa11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 E2F5Q15329 346 aa11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 SHBQ15464 509 aa11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 INAVAQ3KP66 663 aa11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 FNDC3BQ53EP0 1204 aaKnown RBP11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 C6orf118Q5T5N4 469 aa11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 PPP1R26Q5T8A7 1209 aaPredicted RBP11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 SHC4Q6S5L8 630 aa11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 ADAT2Q7Z6V5 191 aaKnown RBP11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 ADIPOR2Q86V24 386 aa11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 ZNF843Q8N446 348 aa11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 IQUBQ8NA54 791 aa11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 ENGASEQ8NFI3 743 aa11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 SLC6A18Q96N87 628 aa11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 CDK5RAP1Q96SZ6 601 aaKnown RBP11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 ARID3AQ99856 593 aa11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 NT5C1AQ9BXI3 368 aa11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 DUSP16Q9BY84 665 aa11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 EBF2Q9HAK2 575 aa11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 MARCH2Q9P0N8 246 aa11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 MTMR6Q9Y217 621 aa11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 PCDHGA1Q9Y5H4 931 aa11.87□□□□□ -0.51
CTNNA1-205ENST00000517904 SLC12A8A0AV02 714 aa11.86□□□□□ -0.51
CTNNA1-205ENST00000517904 ENC1O14682 589 aa11.86□□□□□ -0.51
CTNNA1-205ENST00000517904 VILLO15195 856 aa11.86□□□□□ -0.51
CTNNA1-205ENST00000517904 RFPL3O75679 317 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms