RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 RASA4O43374 803 aa27.43■■□□□ 1.98
COL13A1-210ENST00000517713 METTL18O95568 372 aa27.43■■□□□ 1.98
COL13A1-210ENST00000517713 APRTP07741 180 aa27.43■■□□□ 1.98
COL13A1-210ENST00000517713 PAFAH1B3Q15102 231 aaKnown RBP27.43■■□□□ 1.98
COL13A1-210ENST00000517713 RASA2Q15283 850 aa27.43■■□□□ 1.98
COL13A1-210ENST00000517713 IGDCC3Q8IVU1 814 aa27.43■■□□□ 1.98
COL13A1-210ENST00000517713 FBF1Q8TES7 1133 aa27.43■■□□□ 1.98
COL13A1-210ENST00000517713 LGMNQ99538 433 aa27.43■■□□□ 1.98
COL13A1-210ENST00000517713 PRMT1Q99873 361 aaKnown RBP27.43■■□□□ 1.98
COL13A1-210ENST00000517713 TMEM161AQ9NX61 479 aa27.43■■□□□ 1.98
COL13A1-210ENST00000517713 PTPRDP23468 1912 aa27.43■■□□□ 1.98
COL13A1-210ENST00000517713 FAM72CH0Y354 149 aa27.43■■□□□ 1.98
COL13A1-210ENST00000517713 I6L893 689 aaPredicted RBP27.43■■□□□ 1.98
COL13A1-210ENST00000517713 VAV1P15498 845 aa27.43■■□□□ 1.98
COL13A1-210ENST00000517713 CDK7P50613 346 aa27.43■■□□□ 1.98
COL13A1-210ENST00000517713 SEMA3BQ13214 749 aa27.43■■□□□ 1.98
COL13A1-210ENST00000517713 FAM72AQ5TYM5 149 aa27.43■■□□□ 1.98
COL13A1-210ENST00000517713 FAM72DQ6L9T8 149 aa27.43■■□□□ 1.98
COL13A1-210ENST00000517713 FAM72BQ86X60 149 aa27.43■■□□□ 1.98
COL13A1-210ENST00000517713 CHMP6Q96FZ7 201 aa27.43■■□□□ 1.98
COL13A1-210ENST00000517713 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.43■■□□□ 1.98
COL13A1-210ENST00000517713 ACSS3Q9H6R3 686 aa27.43■■□□□ 1.98
COL13A1-210ENST00000517713 WDCPQ9H6R7 721 aa27.43■■□□□ 1.98
COL13A1-210ENST00000517713 DCLK1O15075 740 aa27.42■■□□□ 1.98
COL13A1-210ENST00000517713 AVILO75366 819 aa27.42■■□□□ 1.98
COL13A1-210ENST00000517713 COL6A1P12109 1028 aa27.42■■□□□ 1.98
COL13A1-210ENST00000517713 CXCR3P49682 368 aa27.42■■□□□ 1.98
COL13A1-210ENST00000517713 KLHL38Q2WGJ6 581 aa27.42■■□□□ 1.98
COL13A1-210ENST00000517713 ARHGEF18Q6ZSZ5 1173 aa27.42■■□□□ 1.98
COL13A1-210ENST00000517713 SCAMP5Q8TAC9 235 aa27.42■■□□□ 1.98
COL13A1-210ENST00000517713 TRIM62Q9BVG3 475 aa27.42■■□□□ 1.98
COL13A1-210ENST00000517713 CCDC134Q9H6E4 229 aa27.42■■□□□ 1.98
COL13A1-210ENST00000517713 PSMC3IPQ9P2W1 217 aaPredicted RBP27.42■■□□□ 1.98
COL13A1-210ENST00000517713 DNAJB4Q9UDY4 337 aa27.42■■□□□ 1.98
COL13A1-210ENST00000517713 PRG3Q9Y2Y8 225 aaPredicted RBP27.42■■□□□ 1.98
COL13A1-210ENST00000517713 COL4A4P53420 1690 aaPredicted RBP27.41■■□□□ 1.98
COL13A1-210ENST00000517713 AMHP03971 560 aa27.41■■□□□ 1.98
COL13A1-210ENST00000517713 GRIK1P39086 918 aa27.41■■□□□ 1.98
COL13A1-210ENST00000517713 HCAR3P49019 387 aa27.41■■□□□ 1.98
COL13A1-210ENST00000517713 BFSP2Q13515 415 aa27.41■■□□□ 1.98
COL13A1-210ENST00000517713 PDK1Q15118 436 aa27.41■■□□□ 1.98
COL13A1-210ENST00000517713 TRABD2AQ86V40 505 aa27.41■■□□□ 1.98
COL13A1-210ENST00000517713 MCUQ8NE86 351 aa27.41■■□□□ 1.98
COL13A1-210ENST00000517713 MRRFQ96E11 262 aaKnown RBP27.41■■□□□ 1.98
COL13A1-210ENST00000517713 ZNF638Q14966 1978 aaKnown RBP27.41■■□□□ 1.98
COL13A1-210ENST00000517713 NBNO60934 754 aa27.41■■□□□ 1.98
COL13A1-210ENST00000517713 OAZ2O95190 189 aa27.41■■□□□ 1.98
COL13A1-210ENST00000517713 OR4Q2P0C623 313 aa27.41■■□□□ 1.98
COL13A1-210ENST00000517713 TPI1P60174 286 aa27.41■■□□□ 1.98
COL13A1-210ENST00000517713 PRKD1Q15139 912 aaPredicted RBP27.41■■□□□ 1.98
COL13A1-210ENST00000517713 SLC39A12Q504Y0 691 aa27.41■■□□□ 1.98
COL13A1-210ENST00000517713 TAC4Q86UU9 113 aa27.41■■□□□ 1.98
COL13A1-210ENST00000517713 CAND1Q86VP6 1230 aaKnown RBP27.41■■□□□ 1.98
COL13A1-210ENST00000517713 SEZ6LQ9BYH1 1024 aa27.41■■□□□ 1.98
COL13A1-210ENST00000517713 NR2E3Q9Y5X4 410 aa27.41■■□□□ 1.98
COL13A1-210ENST00000517713 A0A0A0MRY4 1105 aa27.4■■□□□ 1.98
COL13A1-210ENST00000517713 ERCC2P18074 760 aa27.4■■□□□ 1.98
COL13A1-210ENST00000517713 TPSB2P20231 275 aa27.4■■□□□ 1.98
COL13A1-210ENST00000517713 AP1B1Q10567 949 aa27.4■■□□□ 1.98
COL13A1-210ENST00000517713 EFTUD2Q15029 972 aaKnown RBP eCLIP27.4■■□□□ 1.98
COL13A1-210ENST00000517713 TPSAB1Q15661 275 aa27.4■■□□□ 1.98
COL13A1-210ENST00000517713 ANKRD20A2Q5SQ80 823 aa27.4■■□□□ 1.98
COL13A1-210ENST00000517713 ANKRD20A1Q5TYW2 823 aa27.4■■□□□ 1.98
COL13A1-210ENST00000517713 ANKRD20A3Q5VUR7 823 aa27.4■■□□□ 1.98
COL13A1-210ENST00000517713 BEND5Q7L4P6 421 aa27.4■■□□□ 1.98
COL13A1-210ENST00000517713 ANKRD42Q8N9B4 389 aa27.4■■□□□ 1.98
COL13A1-210ENST00000517713 NETO2Q8NC67 525 aa27.4■■□□□ 1.98
COL13A1-210ENST00000517713 MGARPQ8TDB4 240 aa27.4■■□□□ 1.98
COL13A1-210ENST00000517713 SPATA13Q96N96 652 aa27.4■■□□□ 1.98
COL13A1-210ENST00000517713 ZNF317Q96PQ6 595 aaPredicted RBP27.4■■□□□ 1.98
COL13A1-210ENST00000517713 FERMT1Q9BQL6 677 aa27.4■■□□□ 1.98
COL13A1-210ENST00000517713 TKTL2Q9H0I9 626 aa27.4■■□□□ 1.98
COL13A1-210ENST00000517713 ZCWPW1Q9H0M4 648 aa27.4■■□□□ 1.98
COL13A1-210ENST00000517713 PATJQ8NI35 1801 aa27.4■■□□□ 1.98
COL13A1-210ENST00000517713 ENPP3O14638 875 aa27.4■■□□□ 1.98
COL13A1-210ENST00000517713 PPP1R12AO14974 1030 aaPredicted RBP27.4■■□□□ 1.98
COL13A1-210ENST00000517713 TADA2AO75478 443 aa27.4■■□□□ 1.98
COL13A1-210ENST00000517713 GLUD2P49448 558 aa27.4■■□□□ 1.98
COL13A1-210ENST00000517713 SLC5A3P53794 718 aa27.4■■□□□ 1.98
COL13A1-210ENST00000517713 PKN2Q16513 984 aaKnown RBP27.4■■□□□ 1.98
COL13A1-210ENST00000517713 FAM126BQ8IXS8 530 aa27.4■■□□□ 1.98
COL13A1-210ENST00000517713 DCP1BQ8IZD4 617 aaKnown RBP27.4■■□□□ 1.98
COL13A1-210ENST00000517713 AGGF1Q8N302 714 aaeCLIP27.4■■□□□ 1.98
COL13A1-210ENST00000517713 DBF4BQ8NFT6 615 aa27.4■■□□□ 1.98
COL13A1-210ENST00000517713 ELAC1Q9H777 363 aaKnown RBP27.4■■□□□ 1.98
COL13A1-210ENST00000517713 STK10O94804 968 aaKnown RBP27.39■■□□□ 1.98
COL13A1-210ENST00000517713 KRT15P19012 456 aa27.39■■□□□ 1.98
COL13A1-210ENST00000517713 DRD4P21917 467 aa27.39■■□□□ 1.98
COL13A1-210ENST00000517713 IFNAR2P48551 515 aa27.39■■□□□ 1.98
COL13A1-210ENST00000517713 MPP2Q14168 576 aa27.39■■□□□ 1.98
COL13A1-210ENST00000517713 GPNMBQ14956 572 aa27.39■■□□□ 1.98
COL13A1-210ENST00000517713 LRRC14Q15048 493 aa27.39■■□□□ 1.98
COL13A1-210ENST00000517713 PDZD4Q76G19 769 aaPredicted RBP27.39■■□□□ 1.98
COL13A1-210ENST00000517713 CPLX4Q7Z7G2 160 aa27.39■■□□□ 1.98
COL13A1-210ENST00000517713 CCNYQ8ND76 341 aa27.39■■□□□ 1.98
COL13A1-210ENST00000517713 DQX1Q8TE96 717 aaKnown RBP27.39■■□□□ 1.98
COL13A1-210ENST00000517713 SH3TC2Q8TF17 1288 aa27.39■■□□□ 1.98
COL13A1-210ENST00000517713 DYDC1Q8WWB3 177 aa27.39■■□□□ 1.98
COL13A1-210ENST00000517713 P2RY11Q96G91 374 aa27.39■■□□□ 1.98
COL13A1-210ENST00000517713 PCDHB7Q9Y5E2 793 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms