RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 CUL4BQ13620 913 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 ACAP2Q15057 778 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 PTPN14Q15678 1187 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 CLUL1Q15846 466 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 FAM187BQ17R55 369 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 ZNF568Q3ZCX4 644 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 UBXN11Q5T124 520 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 MFSD4BQ5TF39 518 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 NT5DC1Q5TFE4 455 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 DENND5AQ6IQ26 1287 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 GLB1LQ6UWU2 654 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 UNC5DQ6UXZ4 953 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 STXBP4Q6ZWJ1 553 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 ZNF720Q7Z2F6 126 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 THNSL1Q8IYQ7 743 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 SLC17A8Q8NDX2 589 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 URGCPQ8TCY9 931 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 FBLIM1Q8WUP2 373 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 CHTF18Q8WVB6 975 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 WFDC12Q8WWY7 111 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 STON2Q8WXE9 905 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 CENPIQ92674 756 aaPredicted RBP2.95□□□□□ -1.94
SKP1-204ENST00000517691 EZH1Q92800 747 aaPredicted RBP2.95□□□□□ -1.94
SKP1-204ENST00000517691 HPS3Q969F9 1004 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 DNAJC19Q96DA6 116 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 CCDC51Q96ER9 411 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 C1orf159Q96HA4 380 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 FAM46AQ96IP4 442 aaKnown RBP2.95□□□□□ -1.94
SKP1-204ENST00000517691 ZBTB45Q96K62 511 aaPredicted RBP2.95□□□□□ -1.94
SKP1-204ENST00000517691 GBP4Q96PP9 640 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 ACCSQ96QU6 501 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 SLC38A3Q99624 504 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 TRIM9Q9C026 710 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 UNKQ9C0B0 810 aaKnown RBP2.95□□□□□ -1.94
SKP1-204ENST00000517691 TRIT1Q9H3H1 467 aaKnown RBP2.95□□□□□ -1.94
SKP1-204ENST00000517691 NXF3Q9H4D5 531 aaKnown RBP2.95□□□□□ -1.94
SKP1-204ENST00000517691 PDZD7Q9H5P4 517 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 SLC39A2Q9NP94 309 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 UBN1Q9NPG3 1134 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 EXOC1Q9NV70 894 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 THG1LQ9NWX6 298 aaKnown RBP2.95□□□□□ -1.94
SKP1-204ENST00000517691 H2AFY2Q9P0M6 372 aaPredicted RBP2.95□□□□□ -1.94
SKP1-204ENST00000517691 SEL1LQ9UBV2 794 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 GPR34Q9UPC5 381 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 EXOC7Q9UPT5 735 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 HPSEQ9Y251 543 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 PCDHGB2Q9Y5G2 931 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 PCDHA9Q9Y5H5 950 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 FHOD1Q9Y613 1164 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 PDE4DIPQ5VU43 2346 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 PHLPP2Q6ZVD8 1323 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 CNTNAP2Q9UHC6 1331 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 PVALEFA0A1B0GWK0 134 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 LINC01553A4QN01 128 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 KLHL33A6NCF5 533 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 ARL5CA6NH57 179 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 A6NLC8 198 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 RFXAPO00287 272 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 ARNTLO00327 626 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 FRS3O43559 492 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 ZNF623O75123 536 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 ZC3H11AO75152 810 aaKnown RBP eCLIP2.94□□□□□ -1.94
SKP1-204ENST00000517691 TOM1L1O75674 476 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 PRPF6O94906 941 aaKnown RBP2.94□□□□□ -1.94
SKP1-204ENST00000517691 SMC2O95347 1197 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 CRTAMO95727 393 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 HRGP04196 525 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 MCF2P10911 925 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 RAB6AP20340 208 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 PEX2P28328 305 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 ABCD1P33897 745 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 CA8P35219 290 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 BMPR1AP36894 532 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 ALDH7A1P49419 539 aaKnown RBP2.94□□□□□ -1.94
SKP1-204ENST00000517691 CASP5P51878 434 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 GFRA1P56159 465 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 UBE2HP62256 183 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 RNF4P78317 190 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 GABREP78334 506 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 HTRA4P83105 476 aaPredicted RBP2.94□□□□□ -1.94
SKP1-204ENST00000517691 GTF2BQ00403 316 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 PLIN5Q00G26 463 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 TAP1Q03518 808 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 BTKQ06187 659 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 PNOCQ13519 176 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 POSTNQ15063 836 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 ASIC2Q16515 512 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 CAMK4Q16566 473 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 MEA1Q16626 185 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 DCAF4L1Q3SXM0 396 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 GLIPR1L2Q4G1C9 344 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 EPC2Q52LR7 807 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 NOMO2Q5JPE7 1267 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 FAM209BQ5JX69 171 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 CLLU1OSQ5K130 101 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 FAM26FQ5R3K3 315 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 ATAT1Q5SQI0 421 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 EEF1DP3Q658K8 133 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 ISM2Q6H9L7 571 aa2.94□□□□□ -1.94
SKP1-204ENST00000517691 MPZL3Q6UWV2 235 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms