RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 HINFPQ9BQA5 517 aa25.63■■□□□ 1.69
PVT1-204ENST00000517525 CD248Q9HCU0 757 aa25.63■■□□□ 1.69
PVT1-204ENST00000517525 SIK3Q9Y2K2 1263 aa25.63■■□□□ 1.69
PVT1-204ENST00000517525 CEP83Q9Y592 693 aa25.63■■□□□ 1.69
PVT1-204ENST00000517525 LGALS16A8MUM7 142 aa25.62■■□□□ 1.69
PVT1-204ENST00000517525 TIMM44O43615 452 aa25.62■■□□□ 1.69
PVT1-204ENST00000517525 ACSL4O60488 711 aa25.62■■□□□ 1.69
PVT1-204ENST00000517525 ENPP2Q13822 863 aa25.62■■□□□ 1.69
PVT1-204ENST00000517525 EIF4HQ15056 248 aaKnown RBP25.62■■□□□ 1.69
PVT1-204ENST00000517525 FAM133BQ5BKY9 247 aaKnown RBP25.62■■□□□ 1.69
PVT1-204ENST00000517525 EGFLAMQ63HQ2 1017 aa25.62■■□□□ 1.69
PVT1-204ENST00000517525 APTXQ7Z2E3 356 aaKnown RBP25.62■■□□□ 1.69
PVT1-204ENST00000517525 ZDHHC17Q8IUH5 632 aa25.62■■□□□ 1.69
PVT1-204ENST00000517525 TMEM35BQ8NCS4 154 aa25.62■■□□□ 1.69
PVT1-204ENST00000517525 C1orf131Q8NDD1 294 aaKnown RBP25.62■■□□□ 1.69
PVT1-204ENST00000517525 ZNF397Q8NF99 534 aaPredicted RBP25.62■■□□□ 1.69
PVT1-204ENST00000517525 BHMTQ93088 406 aa25.62■■□□□ 1.69
PVT1-204ENST00000517525 DDX50Q9BQ39 737 aaKnown RBP25.62■■□□□ 1.69
PVT1-204ENST00000517525 NAT10Q9H0A0 1025 aaKnown RBP25.62■■□□□ 1.69
PVT1-204ENST00000517525 TJP2Q9UDY2 1190 aa25.62■■□□□ 1.69
PVT1-204ENST00000517525 CAPN9O14815 690 aa25.61■■□□□ 1.69
PVT1-204ENST00000517525 HSF2BPO75031 334 aa25.61■■□□□ 1.69
PVT1-204ENST00000517525 USP39Q53GS9 565 aaKnown RBP25.61■■□□□ 1.69
PVT1-204ENST00000517525 PIK3R6Q5UE93 754 aa25.61■■□□□ 1.69
PVT1-204ENST00000517525 ANO7Q6IWH7 933 aa25.61■■□□□ 1.69
PVT1-204ENST00000517525 ANKS1BQ7Z6G8 1248 aa25.61■■□□□ 1.69
PVT1-204ENST00000517525 KIAA0907Q7Z7F0 614 aaPredicted RBP25.61■■□□□ 1.69
PVT1-204ENST00000517525 TAC4Q86UU9 113 aa25.61■■□□□ 1.69
PVT1-204ENST00000517525 PASD1Q8IV76 773 aa25.61■■□□□ 1.69
PVT1-204ENST00000517525 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.61■■□□□ 1.69
PVT1-204ENST00000517525 ZNF557Q8N988 423 aaPredicted RBP25.61■■□□□ 1.69
PVT1-204ENST00000517525 MDGA1Q8NFP4 955 aa25.61■■□□□ 1.69
PVT1-204ENST00000517525 CLEC4EQ9ULY5 219 aa25.61■■□□□ 1.69
PVT1-204ENST00000517525 A0A1W2PQF6 199 aa25.6■■□□□ 1.69
PVT1-204ENST00000517525 LSM8O95777 96 aaKnown RBP25.6■■□□□ 1.69
PVT1-204ENST00000517525 TRUB2O95900 331 aaKnown RBP25.6■■□□□ 1.69
PVT1-204ENST00000517525 SCNN1AP37088 669 aa25.6■■□□□ 1.69
PVT1-204ENST00000517525 GABRB2P47870 512 aa25.6■■□□□ 1.69
PVT1-204ENST00000517525 JAM2P57087 298 aa25.6■■□□□ 1.69
PVT1-204ENST00000517525 TAF5Q15542 800 aa25.6■■□□□ 1.69
PVT1-204ENST00000517525 GEN1Q17RS7 908 aa25.6■■□□□ 1.69
PVT1-204ENST00000517525 PLK5Q496M5 336 aa25.6■■□□□ 1.69
PVT1-204ENST00000517525 PTPN20Q4JDL3 420 aa25.6■■□□□ 1.69
PVT1-204ENST00000517525 SDE2Q6IQ49 451 aa25.6■■□□□ 1.69
PVT1-204ENST00000517525 OLFML1Q6UWY5 402 aa25.6■■□□□ 1.69
PVT1-204ENST00000517525 SLC26A9Q7LBE3 791 aa25.6■■□□□ 1.69
PVT1-204ENST00000517525 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.6■■□□□ 1.69
PVT1-204ENST00000517525 KBTBD6Q86V97 674 aa25.6■■□□□ 1.69
PVT1-204ENST00000517525 ZNF677Q86XU0 584 aa25.6■■□□□ 1.69
PVT1-204ENST00000517525 ERGIC2Q96RQ1 377 aa25.6■■□□□ 1.69
PVT1-204ENST00000517525 THAP10Q9P2Z0 257 aaPredicted RBP25.6■■□□□ 1.69
PVT1-204ENST00000517525 ERBB2P04626 1255 aa25.59■■□□□ 1.69
PVT1-204ENST00000517525 SLC6A3Q01959 620 aa25.59■■□□□ 1.69
PVT1-204ENST00000517525 LPAL2Q16609 132 aa25.59■■□□□ 1.69
PVT1-204ENST00000517525 CHPFQ8IZ52 775 aa25.59■■□□□ 1.69
PVT1-204ENST00000517525 EPS8L1Q8TE68 723 aa25.59■■□□□ 1.69
PVT1-204ENST00000517525 IPO4Q8TEX9 1081 aaKnown RBP25.59■■□□□ 1.69
PVT1-204ENST00000517525 UCMAQ8WVF2 138 aa25.59■■□□□ 1.69
PVT1-204ENST00000517525 ACOX2Q99424 681 aa25.59■■□□□ 1.69
PVT1-204ENST00000517525 TMEM51Q9NW97 253 aa25.59■■□□□ 1.69
PVT1-204ENST00000517525 ELOVL2Q9NXB9 296 aa25.59■■□□□ 1.69
PVT1-204ENST00000517525 PCDHGA5Q9Y5G8 931 aa25.59■■□□□ 1.69
PVT1-204ENST00000517525 WDR87Q6ZQQ6 2873 aa25.59■■□□□ 1.69
PVT1-204ENST00000517525 FOXD2O60548 495 aaPredicted RBP25.58■■□□□ 1.69
PVT1-204ENST00000517525 EPN2O95208 641 aa25.58■■□□□ 1.69
PVT1-204ENST00000517525 HOXB2P14652 356 aa25.58■■□□□ 1.69
PVT1-204ENST00000517525 SLC6A4P31645 630 aa25.58■■□□□ 1.69
PVT1-204ENST00000517525 CDK17Q00537 523 aa25.58■■□□□ 1.69
PVT1-204ENST00000517525 MTA1Q13330 715 aa25.58■■□□□ 1.69
PVT1-204ENST00000517525 NADSYN1Q6IA69 706 aa25.58■■□□□ 1.69
PVT1-204ENST00000517525 FAM183BPQ6ZVS7 135 aa25.58■■□□□ 1.69
PVT1-204ENST00000517525 NOP9Q86U38 636 aaKnown RBP25.58■■□□□ 1.69
PVT1-204ENST00000517525 KIAA2013Q8IYS2 634 aa25.58■■□□□ 1.69
PVT1-204ENST00000517525 WFIKKN2Q8TEU8 576 aa25.58■■□□□ 1.69
PVT1-204ENST00000517525 DUSP15Q9H1R2 295 aaPredicted RBP25.58■■□□□ 1.69
PVT1-204ENST00000517525 ZDHHC4Q9NPG8 344 aa25.58■■□□□ 1.69
PVT1-204ENST00000517525 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.58■■□□□ 1.69
PVT1-204ENST00000517525 CFAP54Q96N23 3096 aa25.58■■□□□ 1.69
PVT1-204ENST00000517525 TSPAN3O60637 253 aa25.57■■□□□ 1.68
PVT1-204ENST00000517525 RHOBTB1O94844 696 aa25.57■■□□□ 1.68
PVT1-204ENST00000517525 SLC2A3P11169 496 aa25.57■■□□□ 1.68
PVT1-204ENST00000517525 CDK11BP21127 795 aaKnown RBP25.57■■□□□ 1.68
PVT1-204ENST00000517525 P2RY2P41231 377 aa25.57■■□□□ 1.68
PVT1-204ENST00000517525 KLK7P49862 253 aa25.57■■□□□ 1.68
PVT1-204ENST00000517525 POLR2FP61218 127 aaKnown RBP25.57■■□□□ 1.68
PVT1-204ENST00000517525 BYSLQ13895 437 aaKnown RBP25.57■■□□□ 1.68
PVT1-204ENST00000517525 SYCP1Q15431 976 aa25.57■■□□□ 1.68
PVT1-204ENST00000517525 CSRP2Q16527 193 aa25.57■■□□□ 1.68
PVT1-204ENST00000517525 DCAF6Q58WW2 860 aa25.57■■□□□ 1.68
PVT1-204ENST00000517525 DEFB106AQ8N104 65 aa25.57■■□□□ 1.68
PVT1-204ENST00000517525 BTN2A3PQ96KV6 586 aa25.57■■□□□ 1.68
PVT1-204ENST00000517525 PARD6AQ9NPB6 346 aa25.57■■□□□ 1.68
PVT1-204ENST00000517525 FAM207AQ9NSI2 230 aaPredicted RBP25.57■■□□□ 1.68
PVT1-204ENST00000517525 RRN3Q9NYV6 651 aa25.57■■□□□ 1.68
PVT1-204ENST00000517525 NOCTQ9UK39 431 aaKnown RBP25.57■■□□□ 1.68
PVT1-204ENST00000517525 SPTBN4Q9H254 2564 aa25.57■■□□□ 1.68
PVT1-204ENST00000517525 CEP250Q9BV73 2442 aa25.56■■□□□ 1.68
PVT1-204ENST00000517525 SPAG17Q6Q759 2223 aa25.56■■□□□ 1.68
PVT1-204ENST00000517525 TCRBV21S2A2A0A5A6 115 aa25.56■■□□□ 1.68
PVT1-204ENST00000517525 KCNU1A8MYU2 1149 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms