RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 PRKAG1P54619 331 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 WDR5P61964 334 aaKnown RBP0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 KRT17Q04695 432 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 EXOSC9Q06265 439 aaKnown RBP0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 RBL2Q08999 1139 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 MGAT5BQ3V5L5 792 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 TMCO4Q5TGY1 634 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 FAM72AQ5TYM5 149 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 DMKNQ6E0U4 476 aaPredicted RBP0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 FAM72DQ6L9T8 149 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 HMBOX1Q6NT76 420 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 GDPD4Q6W3E5 623 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 FAM72BQ86X60 149 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 UEVLDQ8IX04 471 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 NIM1KQ8IY84 436 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 DNAJC5GQ8N7S2 189 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 AMER3Q8N944 861 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 FAM71DQ8N9W8 422 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 FAM222BQ8WU58 562 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 USP13Q92995 863 aaPredicted RBP0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 CD101Q93033 1021 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 PPP2R3CQ969Q6 453 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 TTC1Q99614 292 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 LITAFQ99732 161 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 CDK19Q9BWU1 502 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 VN1R3Q9BXE9 311 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 WDCPQ9H6R7 721 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 TRIM36Q9NQ86 728 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 TBC1D14Q9P2M4 693 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 CLIP2Q9UDT6 1046 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 LAMP3Q9UQV4 416 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 APOBEC2Q9Y235 224 aaKnown RBP0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 PCDHA3Q9Y5H8 950 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 HEMK1Q9Y5R4 338 aaPredicted RBP0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 CFAP20Q9Y6A4 193 aaKnown RBP0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 RNF215Q9Y6U7 377 aa0.79□□□□□ -2.28
SCARNA23-201ENST00000516060 CROCCQ5TZA2 2017 aa0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 SAA2-SAA4A0A096LPE2 208 aa0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 SLC22A3O75751 556 aa0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 CRYAAP02489 173 aa0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 HDCP19113 662 aa0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 ATP2B1P20020 1258 aa0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 EPHA3P29320 983 aa0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 UQCRC1P31930 480 aa0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 GALNSP34059 522 aa0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 SLC16A1P53985 500 aa0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 SELENOVP59797 346 aa0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 TRA2BP62995 288 aaKnown RBP0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 BNC1Q01954 994 aa0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 FSCBQ5H9T9 825 aa0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 DCAF12L2Q5VW00 463 aa0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 ARHGAP11AQ6P4F7 1023 aa0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 PAQR4Q8N4S7 273 aaPredicted RBP0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 ANKRD52Q8NB46 1076 aa0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 C3orf20Q8ND61 904 aa0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 NGDNQ8NEJ9 315 aaKnown RBP0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 FAM76AQ8TAV0 307 aa0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 BPIFB1Q8TDL5 484 aa0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 SORCS1Q8WY21 1168 aa0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 ADGRG7Q96K78 797 aa0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 TTLL2Q9BWV7 592 aa0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 MAGEH1Q9H213 219 aa0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 IPO11Q9UI26 975 aaKnown RBP0.78□□□□□ -2.28
SCARNA23-201ENST00000516060 IGLV5-52A0A0A0MRZ9 124 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 A8MVJ9 347 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 RHODO00212 210 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 EXOC5O00471 708 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 KCNJ13O60928 360 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 EGFP01133 1207 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 PRB2P02812 416 aaPredicted RBP0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 DUX4L4P0CJ87 422 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 ADRA1DP25100 572 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 PRKAR1BP31321 381 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 CIITAP33076 1130 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 GTF2F1P35269 517 aaKnown RBP eCLIP0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 LUMP51884 338 aaPredicted RBP0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 MFAP1P55081 439 aaKnown RBP0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 UCP3P55916 312 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 WNT3P56703 355 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 ZP1P60852 638 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 TIAL1Q01085 375 aaKnown RBP eCLIP0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 SNTA1Q13424 505 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 NFE2L2Q16236 605 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 TKFCQ3LXA3 575 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 EEF1AKMT2Q5JPI9 291 aaKnown RBP0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 TCTE1Q5JU00 501 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 EMC10Q5UCC4 262 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 RETSATQ6NUM9 610 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 Q6ZSV7 163 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 SKAP1Q86WV1 359 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 GAS2L3Q86XJ1 694 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 ENGASEQ8NFI3 743 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 OR14A16Q8NHC5 309 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 KAT2BQ92831 832 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 CELF1Q92879 486 aaKnown RBP0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 AHCYL2Q96HN2 611 aaKnown RBP0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 EVA1AQ9H8M9 152 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 CPNE7Q9UBL6 633 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 ABCF2Q9UG63 623 aa0.77□□□□□ -2.29
SCARNA23-201ENST00000516060 POLHQ9Y253 713 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms