RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 VANGL2Q9ULK5 521 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 DDTLA6NHG4 134 aaPredicted RBP11.29□□□□□ -0.6
TRIM41-209ENST00000515834 FAM25AB3EWG3 89 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 FAM25CB3EWG5 89 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 FAM25GB3EWG6 89 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 GRK2P25098 689 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 TUFMP49411 452 aaKnown RBP11.29□□□□□ -0.6
TRIM41-209ENST00000515834 SKP1P63208 163 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 ZNF786Q8N393 782 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 UTP15Q8TED0 518 aaKnown RBP11.29□□□□□ -0.6
TRIM41-209ENST00000515834 SEMA4DQ92854 862 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 MKNK1Q9BUB5 465 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 TUBGCP4Q9UGJ1 667 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 ANAPC2Q9UJX6 822 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 TFR2Q9UP52 801 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 USP15Q9Y4E8 981 aaPredicted RBP11.29□□□□□ -0.6
TRIM41-209ENST00000515834 GLRA3O75311 464 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 SPIDRQ14159 915 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 CRYMQ14894 314 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 C11orf63Q6NUN7 778 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 USP49Q70CQ1 688 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 FLCNQ8NFG4 579 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 SPPL2AQ8TCT8 520 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 KCNB2Q92953 911 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 FAM120BQ96EK7 910 aaKnown RBP11.29□□□□□ -0.6
TRIM41-209ENST00000515834 TRIM66O15016 1216 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 SP3Q02447 781 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 TTC33Q6PID6 262 aaPredicted RBP11.29□□□□□ -0.6
TRIM41-209ENST00000515834 KIF2BQ8N4N8 673 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 DNERQ8NFT8 737 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 ABHD16BQ9H3Z7 469 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 ASAH2Q9NR71 780 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 USP20Q9Y2K6 914 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 LAMC1P11047 1609 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 SSU72P8A0A1W2PR75 194 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 TRDMT1O14717 391 aaKnown RBP11.28□□□□□ -0.6
TRIM41-209ENST00000515834 TIMM44O43615 452 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 IL1BP01584 269 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 SERPINA13PQ6UXR4 307 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 C3orf67Q6ZVT6 689 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 MOSPD2Q8NHP6 518 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 TMEM121Q9BTD3 319 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 PRRG4Q9BZD6 226 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 CERS4Q9HA82 394 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 ENTPD4Q9Y227 616 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 MDH1P40925 334 aaKnown RBP11.28□□□□□ -0.6
TRIM41-209ENST00000515834 CCT8P50990 548 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 ALDH5A1P51649 535 aaPredicted RBP11.28□□□□□ -0.6
TRIM41-209ENST00000515834 PRKAG1P54619 331 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 CYLC2Q14093 348 aaPredicted RBP11.28□□□□□ -0.6
TRIM41-209ENST00000515834 PGM5Q15124 567 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 ERMARDQ5T6L9 678 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 RAET1GQ6H3X3 334 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 SLC30A10Q6XR72 485 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 LRRC74BQ6ZQY2 392 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 SLC47A2Q86VL8 602 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 FAM220BPB1ANY3 271 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 RAD51BO15315 384 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 SKIV2L2P42285 1042 aaKnown RBP11.28□□□□□ -0.6
TRIM41-209ENST00000515834 STX5Q13190 355 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 ITGA9Q13797 1035 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 FGD3Q5JSP0 725 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 DGKKQ5KSL6 1271 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 C11orf88Q6PI97 169 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 FAM20CQ8IXL6 584 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 REPS2Q8NFH8 660 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 SYTL5Q8TDW5 730 aaPredicted RBP11.28□□□□□ -0.6
TRIM41-209ENST00000515834 TSPAN16Q9UKR8 245 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 FMO4P31512 558 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 PTPN11Q06124 597 aaPredicted RBP11.28□□□□□ -0.6
TRIM41-209ENST00000515834 VAC14Q08AM6 782 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 PLPP4Q5VZY2 271 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 CCDC149Q6ZUS6 474 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 USP45Q70EL2 814 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 ZNF655Q8N720 491 aaPredicted RBP11.28□□□□□ -0.6
TRIM41-209ENST00000515834 OR10G6Q8NH81 332 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 CNPY3Q9BT09 278 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 AVENQ9NQS1 362 aaPredicted RBP11.28□□□□□ -0.6
TRIM41-209ENST00000515834 SHOC2Q9UQ13 582 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 ABCC3O15438 1527 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 MICAL2O94851 1124 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 ZNF7P17097 686 aaPredicted RBP11.28□□□□□ -0.6
TRIM41-209ENST00000515834 PON1P27169 355 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 COPAP53621 1224 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 IL2P60568 153 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 POLR2LP62875 67 aaKnown RBP11.28□□□□□ -0.6
TRIM41-209ENST00000515834 ATP8B4Q8TF62 1192 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 LRRC4BQ9NT99 713 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 SNX6Q9UNH7 406 aa11.28□□□□□ -0.6
TRIM41-209ENST00000515834 SPATA31D3P0C874 917 aa11.27□□□□□ -0.6
TRIM41-209ENST00000515834 CYP11B1P15538 503 aa11.27□□□□□ -0.6
TRIM41-209ENST00000515834 DYNC1I2Q13409 638 aaKnown RBP11.27□□□□□ -0.6
TRIM41-209ENST00000515834 RABL6Q3YEC7 729 aaPredicted RBP11.27□□□□□ -0.6
TRIM41-209ENST00000515834 ARMC12Q5T9G4 340 aa11.27□□□□□ -0.6
TRIM41-209ENST00000515834 ZNF697Q5TEC3 545 aa11.27□□□□□ -0.6
TRIM41-209ENST00000515834 SLC27A1Q6PCB7 646 aa11.27□□□□□ -0.6
TRIM41-209ENST00000515834 SPATA31D4Q6ZUB0 917 aa11.27□□□□□ -0.6
TRIM41-209ENST00000515834 FIG4Q92562 907 aa11.27□□□□□ -0.6
TRIM41-209ENST00000515834 GLMNQ92990 594 aa11.27□□□□□ -0.6
TRIM41-209ENST00000515834 DPY30Q9C005 99 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms