RNA–Protein interactions for RNA: ENST00000515006.5

COPB2-213, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 5

Gene COPB2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-213ENST00000515006 FAM131BQ86XD5 332 aa6.18□□□□□ -1.42
COPB2-213ENST00000515006 DDX42Q86XP3 938 aaKnown RBP eCLIP6.18□□□□□ -1.42
COPB2-213ENST00000515006 KLHL7Q8IXQ5 586 aa6.18□□□□□ -1.42
COPB2-213ENST00000515006 PRELID2Q8N945 189 aa6.18□□□□□ -1.42
COPB2-213ENST00000515006 HNRNPLLQ8WVV9 542 aaKnown RBP6.18□□□□□ -1.42
COPB2-213ENST00000515006 RSAD2Q8WXG1 361 aa6.18□□□□□ -1.42
COPB2-213ENST00000515006 NDRG1Q92597 394 aaKnown RBP6.18□□□□□ -1.42
COPB2-213ENST00000515006 NKD2Q969F2 451 aaPredicted RBP6.18□□□□□ -1.42
COPB2-213ENST00000515006 PLD4Q96BZ4 506 aa6.18□□□□□ -1.42
COPB2-213ENST00000515006 LRRC45Q96CN5 670 aa6.18□□□□□ -1.42
COPB2-213ENST00000515006 FAF2Q96CS3 445 aa6.18□□□□□ -1.42
COPB2-213ENST00000515006 GDF15Q99988 308 aa6.18□□□□□ -1.42
COPB2-213ENST00000515006 ERP44Q9BS26 406 aa6.18□□□□□ -1.42
COPB2-213ENST00000515006 LRRC1Q9BTT6 524 aa6.18□□□□□ -1.42
COPB2-213ENST00000515006 HEMGNQ9BXL5 484 aa6.18□□□□□ -1.42
COPB2-213ENST00000515006 AP1M1Q9BXS5 423 aa6.18□□□□□ -1.42
COPB2-213ENST00000515006 PARD6BQ9BYG5 372 aa6.18□□□□□ -1.42
COPB2-213ENST00000515006 FOXP3Q9BZS1 431 aa6.18□□□□□ -1.42
COPB2-213ENST00000515006 TKTL2Q9H0I9 626 aa6.18□□□□□ -1.42
COPB2-213ENST00000515006 PCDH18Q9HCL0 1135 aa6.18□□□□□ -1.42
COPB2-213ENST00000515006 WDR6Q9NNW5 1121 aaKnown RBP6.18□□□□□ -1.42
COPB2-213ENST00000515006 ARFGAP3Q9NP61 516 aa6.18□□□□□ -1.42
COPB2-213ENST00000515006 ALG13Q9NP73 1137 aaKnown RBP6.18□□□□□ -1.42
COPB2-213ENST00000515006 PIGVQ9NUD9 493 aa6.18□□□□□ -1.42
COPB2-213ENST00000515006 TMEM30AQ9NV96 361 aa6.18□□□□□ -1.42
COPB2-213ENST00000515006 HAUS2Q9NVX0 235 aa6.18□□□□□ -1.42
COPB2-213ENST00000515006 ZDHHC7Q9NXF8 308 aa6.18□□□□□ -1.42
COPB2-213ENST00000515006 GMIPQ9P107 970 aa6.18□□□□□ -1.42
COPB2-213ENST00000515006 OR12D3Q9UGF7 316 aa6.18□□□□□ -1.42
COPB2-213ENST00000515006 RAB21Q9UL25 225 aa6.18□□□□□ -1.42
COPB2-213ENST00000515006 ZNF148Q9UQR1 794 aa6.18□□□□□ -1.42
COPB2-213ENST00000515006 TANC1Q9C0D5 1861 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 SYNJ2BP-COX16A0A087WUM0 186 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 SLC12A8A0AV02 714 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 TYW5A2RUC4 315 aaKnown RBP6.17□□□□□ -1.42
COPB2-213ENST00000515006 LCHNA4D1U4 455 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 C3orf70A6NLC5 250 aaPredicted RBP6.17□□□□□ -1.42
COPB2-213ENST00000515006 KCNU1A8MYU2 1149 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 PI4K2BG5E9Z4 385 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 PPP1R12AO14974 1030 aaPredicted RBP6.17□□□□□ -1.42
COPB2-213ENST00000515006 ATP8B1O43520 1251 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 CREB3O43889 395 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 SEC24AO95486 1093 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 VNN2O95498 520 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 C8AP07357 584 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 CA3P07451 260 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 RHOXF2BP0C7M4 288 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 KRT10P13645 584 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 HMGA1P17096 107 aaKnown RBP6.17□□□□□ -1.42
COPB2-213ENST00000515006 ATF6P18850 670 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 TNFRSF8P28908 595 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 CLCN4P51793 760 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 RABGGTBP53611 331 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 VCPP55072 806 aaKnown RBP6.17□□□□□ -1.42
COPB2-213ENST00000515006 EIF3EP60228 445 aaKnown RBP6.17□□□□□ -1.42
COPB2-213ENST00000515006 ERVFC1P60507 584 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 USP46P62068 366 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 SMAD3P84022 425 aaKnown RBP6.17□□□□□ -1.42
COPB2-213ENST00000515006 C2orf54Q08AI8 447 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 EFEMP1Q12805 493 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 PAFAH1B3Q15102 231 aaKnown RBP6.17□□□□□ -1.42
COPB2-213ENST00000515006 ZC3H12AQ5D1E8 599 aaKnown RBP6.17□□□□□ -1.42
COPB2-213ENST00000515006 C9orf50Q5SZB4 431 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 SDHAF4Q5VUM1 108 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 PLPP4Q5VZY2 271 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 PPP2R2DQ66LE6 453 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 SLC9A4Q6AI14 798 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 TMCO3Q6UWJ1 677 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 RFX8Q6ZV50 586 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 ADAT2Q7Z6V5 191 aaKnown RBP6.17□□□□□ -1.42
COPB2-213ENST00000515006 TAC4Q86UU9 113 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 CDKL3Q8IVW4 592 aaPredicted RBP6.17□□□□□ -1.42
COPB2-213ENST00000515006 CCDC117Q8IWD4 279 aaPredicted RBP6.17□□□□□ -1.42
COPB2-213ENST00000515006 TDHQ8IZJ6 230 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 KIAA1958Q8N8K9 716 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 ZNF557Q8N988 423 aaPredicted RBP6.17□□□□□ -1.42
COPB2-213ENST00000515006 NOA1Q8NC60 698 aaKnown RBP6.17□□□□□ -1.42
COPB2-213ENST00000515006 SLC39A13Q96H72 371 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 PPP1R2P1Q96PQ5 205 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 CSPG4P5Q96PW8 444 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 VAT1Q99536 393 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 RHOXF2Q9BQY4 288 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 C17orf80Q9BSJ5 609 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 DDX47Q9H0S4 455 aaKnown RBP6.17□□□□□ -1.42
COPB2-213ENST00000515006 CRISPLD1Q9H336 500 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 ACBD3Q9H3P7 528 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 TLE6Q9H808 572 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 NMUR1Q9HB89 426 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 EPB41L5Q9HCM4 733 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 ASAH2Q9NR71 780 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 DZANK1Q9NVP4 752 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 LMCD1Q9NZU5 365 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 CWC15Q9P013 229 aaKnown RBP6.17□□□□□ -1.42
COPB2-213ENST00000515006 COX16Q9P0S2 106 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 PPARGC1AQ9UBK2 798 aaKnown RBP6.17□□□□□ -1.42
COPB2-213ENST00000515006 MTRF1LQ9UGC7 380 aaKnown RBP6.17□□□□□ -1.42
COPB2-213ENST00000515006 AMACRQ9UHK6 382 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 LSM7Q9UK45 103 aaKnown RBP6.17□□□□□ -1.42
COPB2-213ENST00000515006 CEP350Q5VT06 3117 aa6.17□□□□□ -1.42
COPB2-213ENST00000515006 SCN1AP35498 2009 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms