RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 NLRP9Q7RTR0 991 aa15.33■□□□□ 0.05
NUP54-217ENST00000514987 FAM131BQ86XD5 332 aa15.33■□□□□ 0.05
NUP54-217ENST00000514987 SRPK1Q96SB4 655 aaKnown RBP15.33■□□□□ 0.05
NUP54-217ENST00000514987 KLF6Q99612 283 aaPredicted RBP15.33■□□□□ 0.05
NUP54-217ENST00000514987 BRD8Q9H0E9 1235 aa15.33■□□□□ 0.05
NUP54-217ENST00000514987 NPHS2Q9NP85 383 aa15.33■□□□□ 0.05
NUP54-217ENST00000514987 CNGB3Q9NQW8 809 aa15.33■□□□□ 0.05
NUP54-217ENST00000514987 PTCH2Q9Y6C5 1203 aa15.33■□□□□ 0.05
NUP54-217ENST00000514987 WDR91A4D1P6 747 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 MANSC4A6NHS7 340 aaPredicted RBP15.32■□□□□ 0.04
NUP54-217ENST00000514987 M0QYT0 321 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 PTGESO14684 152 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 NCAM2O15394 837 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 WFS1O76024 890 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 ALDH1A2O94788 518 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 PAX3P23760 479 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 MRPS6P82932 125 aaKnown RBP15.32■□□□□ 0.04
NUP54-217ENST00000514987 PURAQ00577 322 aaKnown RBP15.32■□□□□ 0.04
NUP54-217ENST00000514987 CDK18Q07002 472 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 SCAPQ12770 1279 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 NBPF20Q3BBV1 942 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 SYCP2LQ5T4T6 812 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 ATG16L1Q676U5 607 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 FAM228AQ86W67 206 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 ANKLE1Q8NAG6 615 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 ACMSDQ8TDX5 336 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 CDKL2Q92772 493 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 TTC17Q96AE7 1141 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 FAM111AQ96PZ2 611 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 APBA2Q99767 749 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 TSPYL2Q9H2G4 693 aaPredicted RBP15.32■□□□□ 0.04
NUP54-217ENST00000514987 GOLGA2P5Q9HBQ8 144 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 MOCS1Q9NZB8 636 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 FLRT1Q9NZU1 646 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 ZFP69BQ9UJL9 534 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 PLLPQ9Y342 182 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 TRPV2Q9Y5S1 764 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 CXorf49A8MYA2 514 aaPredicted RBP15.32■□□□□ 0.04
NUP54-217ENST00000514987 I3L4J1 428 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 TRAFD1O14545 582 aaPredicted RBP15.32■□□□□ 0.04
NUP54-217ENST00000514987 BIRC5O15392 142 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 MTSS1O43312 755 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 DNAJC6O75061 913 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 PIAS1O75925 651 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 MAP3K6O95382 1288 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 F9P00740 461 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 RPL9P32969 192 aaKnown RBP15.32■□□□□ 0.04
NUP54-217ENST00000514987 CRHR1P34998 444 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 TKTL1P51854 596 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 GPR162Q16538 588 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 PREPLQ4J6C6 727 aaPredicted RBP15.32■□□□□ 0.04
NUP54-217ENST00000514987 WLSQ5T9L3 541 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 WSCD1Q658N2 575 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 CLEC20AQ6ZU45 233 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 PAQR9Q6ZVX9 377 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 MARK2Q7KZI7 788 aaKnown RBP15.32■□□□□ 0.04
NUP54-217ENST00000514987 COLGALT1Q8NBJ5 622 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 ARRDC4Q8NCT1 418 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 DEPDC1BQ8WUY9 529 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 PGAP3Q96FM1 320 aaPredicted RBP15.32■□□□□ 0.04
NUP54-217ENST00000514987 SENP8Q96LD8 212 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 PLAC1Q9HBJ0 212 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 CD248Q9HCU0 757 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 RNF19AQ9NV58 838 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 DDX43Q9NXZ2 648 aaKnown RBP15.32■□□□□ 0.04
NUP54-217ENST00000514987 IGSF9Q9P2J2 1179 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 LNPEPQ9UIQ6 1025 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 CDH9Q9ULB4 789 aa15.32■□□□□ 0.04
NUP54-217ENST00000514987 RPL26L1Q9UNX3 145 aaKnown RBP15.32■□□□□ 0.04
NUP54-217ENST00000514987 RNF103O00237 685 aa15.31■□□□□ 0.04
NUP54-217ENST00000514987 EEF2KO00418 725 aaKnown RBP15.31■□□□□ 0.04
NUP54-217ENST00000514987 CAPN9O14815 690 aa15.31■□□□□ 0.04
NUP54-217ENST00000514987 RFPL1O75677 317 aa15.31■□□□□ 0.04
NUP54-217ENST00000514987 ATP5BP06576 529 aaKnown RBP15.31■□□□□ 0.04
NUP54-217ENST00000514987 THP07101 528 aa15.31■□□□□ 0.04
NUP54-217ENST00000514987 KRT16P08779 473 aa15.31■□□□□ 0.04
NUP54-217ENST00000514987 AKR1A1P14550 325 aa15.31■□□□□ 0.04
NUP54-217ENST00000514987 VAV1P15498 845 aa15.31■□□□□ 0.04
NUP54-217ENST00000514987 PGAM1P18669 254 aa15.31■□□□□ 0.04
NUP54-217ENST00000514987 CCND1P24385 295 aa15.31■□□□□ 0.04
NUP54-217ENST00000514987 ARFIP2P53365 341 aa15.31■□□□□ 0.04
NUP54-217ENST00000514987 BEX3Q00994 111 aa15.31■□□□□ 0.04
NUP54-217ENST00000514987 DPYSQ14117 519 aa15.31■□□□□ 0.04
NUP54-217ENST00000514987 TAF1CQ15572 869 aaPredicted RBP15.31■□□□□ 0.04
NUP54-217ENST00000514987 ARL13BQ3SXY8 428 aa15.31■□□□□ 0.04
NUP54-217ENST00000514987 MDH1BQ5I0G3 518 aa15.31■□□□□ 0.04
NUP54-217ENST00000514987 INTS6LQ5JSJ4 861 aaKnown RBP15.31■□□□□ 0.04
NUP54-217ENST00000514987 OTUD1Q5VV17 481 aaPredicted RBP15.31■□□□□ 0.04
NUP54-217ENST00000514987 DENND5BQ6ZUT9 1274 aa15.31■□□□□ 0.04
NUP54-217ENST00000514987 RFX8Q6ZV50 586 aa15.31■□□□□ 0.04
NUP54-217ENST00000514987 PYROXD2Q8N2H3 581 aa15.31■□□□□ 0.04
NUP54-217ENST00000514987 P2RY11Q96G91 374 aa15.31■□□□□ 0.04
NUP54-217ENST00000514987 C7orf26Q96N11 449 aa15.31■□□□□ 0.04
NUP54-217ENST00000514987 SYT15Q9BQS2 421 aa15.31■□□□□ 0.04
NUP54-217ENST00000514987 MTG1Q9BT17 334 aaPredicted RBP15.31■□□□□ 0.04
NUP54-217ENST00000514987 TRIP12Q14669 1992 aaPredicted RBP15.3■□□□□ 0.04
NUP54-217ENST00000514987 MFSD11O43934 449 aa15.3■□□□□ 0.04
NUP54-217ENST00000514987 DUSP11O75319 330 aaKnown RBP15.3■□□□□ 0.04
NUP54-217ENST00000514987 IGHA2P01877 340 aa15.3■□□□□ 0.04
NUP54-217ENST00000514987 PCSK1P29120 753 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms