RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 OR12D3Q9UGF7 316 aa16.58■□□□□ 0.24
NUP54-214ENST00000514307 DNMT3LQ9UJW3 386 aa16.58■□□□□ 0.24
NUP54-214ENST00000514307 R3HDM2Q9Y2K5 976 aaKnown RBP16.58■□□□□ 0.24
NUP54-214ENST00000514307 YIPF1Q9Y548 306 aa16.58■□□□□ 0.24
NUP54-214ENST00000514307 RAD54BQ9Y620 910 aa16.58■□□□□ 0.24
NUP54-214ENST00000514307 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.57■□□□□ 0.24
NUP54-214ENST00000514307 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.57■□□□□ 0.24
NUP54-214ENST00000514307 ATP8B1O43520 1251 aa16.57■□□□□ 0.24
NUP54-214ENST00000514307 CREB3O43889 395 aa16.57■□□□□ 0.24
NUP54-214ENST00000514307 APOEP02649 317 aa16.57■□□□□ 0.24
NUP54-214ENST00000514307 LRG1P02750 347 aa16.57■□□□□ 0.24
NUP54-214ENST00000514307 MAGEA10P43363 369 aaPredicted RBP16.57■□□□□ 0.24
NUP54-214ENST00000514307 COG7P83436 770 aa16.57■□□□□ 0.24
NUP54-214ENST00000514307 OTUD4Q01804 1114 aaKnown RBP16.57■□□□□ 0.24
NUP54-214ENST00000514307 RING1Q06587 406 aa16.57■□□□□ 0.24
NUP54-214ENST00000514307 ADCY2Q08462 1091 aa16.57■□□□□ 0.24
NUP54-214ENST00000514307 TWF1Q12792 350 aa16.57■□□□□ 0.24
NUP54-214ENST00000514307 EFEMP1Q12805 493 aa16.57■□□□□ 0.24
NUP54-214ENST00000514307 SHHQ15465 462 aa16.57■□□□□ 0.24
NUP54-214ENST00000514307 DUPD1Q68J44 220 aa16.57■□□□□ 0.24
NUP54-214ENST00000514307 DARS2Q6PI48 645 aaKnown RBP16.57■□□□□ 0.24
NUP54-214ENST00000514307 KLHDC10Q6PID8 442 aa16.57■□□□□ 0.24
NUP54-214ENST00000514307 UNC45BQ8IWX7 931 aa16.57■□□□□ 0.24
NUP54-214ENST00000514307 SLC35B2Q8TB61 432 aa16.57■□□□□ 0.24
NUP54-214ENST00000514307 ACTL9Q8TC94 416 aa16.57■□□□□ 0.24
NUP54-214ENST00000514307 RSAD2Q8WXG1 361 aa16.57■□□□□ 0.24
NUP54-214ENST00000514307 ATG4AQ8WYN0 398 aa16.57■□□□□ 0.24
NUP54-214ENST00000514307 SEC14L1Q92503 715 aa16.57■□□□□ 0.24
NUP54-214ENST00000514307 CASP10Q92851 521 aa16.57■□□□□ 0.24
NUP54-214ENST00000514307 TLR9Q9NR96 1032 aa16.57■□□□□ 0.24
NUP54-214ENST00000514307 SFMBT1Q9UHJ3 866 aa16.57■□□□□ 0.24
NUP54-214ENST00000514307 HBS1LQ9Y450 684 aaKnown RBP16.57■□□□□ 0.24
NUP54-214ENST00000514307 INSL5Q9Y5Q6 135 aa16.57■□□□□ 0.24
NUP54-214ENST00000514307 LCHNA4D1U4 455 aa16.56■□□□□ 0.24
NUP54-214ENST00000514307 CFAP69A5D8W1 941 aa16.56■□□□□ 0.24
NUP54-214ENST00000514307 ZNF840PA6NDX5 716 aa16.56■□□□□ 0.24
NUP54-214ENST00000514307 KCNU1A8MYU2 1149 aa16.56■□□□□ 0.24
NUP54-214ENST00000514307 NCAM2O15394 837 aa16.56■□□□□ 0.24
NUP54-214ENST00000514307 TGM5O43548 720 aa16.56■□□□□ 0.24
NUP54-214ENST00000514307 ZMYND10O75800 440 aa16.56■□□□□ 0.24
NUP54-214ENST00000514307 HMGA1P17096 107 aaKnown RBP16.56■□□□□ 0.24
NUP54-214ENST00000514307 ADCY8P40145 1251 aa16.56■□□□□ 0.24
NUP54-214ENST00000514307 MLLT6P55198 1093 aaPredicted RBP16.56■□□□□ 0.24
NUP54-214ENST00000514307 TPI1P60174 286 aa16.56■□□□□ 0.24
NUP54-214ENST00000514307 ERVFC1P60507 584 aa16.56■□□□□ 0.24
NUP54-214ENST00000514307 MRPS25P82663 173 aaKnown RBP16.56■□□□□ 0.24
NUP54-214ENST00000514307 CAV1Q03135 178 aa16.56■□□□□ 0.24
NUP54-214ENST00000514307 CALCOCO2Q13137 446 aa16.56■□□□□ 0.24
NUP54-214ENST00000514307 HLTFQ14527 1009 aaKnown RBP eCLIP16.56■□□□□ 0.24
NUP54-214ENST00000514307 C1orf228Q6PIY5 440 aa16.56■□□□□ 0.24
NUP54-214ENST00000514307 LRRC31Q6UY01 552 aa16.56■□□□□ 0.24
NUP54-214ENST00000514307 C4orf22Q6V702 233 aa16.56■□□□□ 0.24
NUP54-214ENST00000514307 MTERF4Q7Z6M4 381 aaKnown RBP16.56■□□□□ 0.24
NUP54-214ENST00000514307 KREMEN2Q8NCW0 462 aa16.56■□□□□ 0.24
NUP54-214ENST00000514307 PSMG2Q969U7 264 aa16.56■□□□□ 0.24
NUP54-214ENST00000514307 LRRC45Q96CN5 670 aa16.56■□□□□ 0.24
NUP54-214ENST00000514307 TSPYL1Q9H0U9 437 aa16.56■□□□□ 0.24
NUP54-214ENST00000514307 PLEKHA4Q9H4M7 779 aa16.56■□□□□ 0.24
NUP54-214ENST00000514307 OSER1Q9NX31 292 aa16.56■□□□□ 0.24
NUP54-214ENST00000514307 MSRAQ9UJ68 235 aa16.56■□□□□ 0.24
NUP54-214ENST00000514307 DNPEPQ9ULA0 475 aa16.56■□□□□ 0.24
NUP54-214ENST00000514307 CEP290O15078 2479 aa16.56■□□□□ 0.24
NUP54-214ENST00000514307 C2orf71A6NGG8 1288 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 HACD1B0YJ81 288 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 BHMG1C9JSJ3 638 aaPredicted RBP16.55■□□□□ 0.24
NUP54-214ENST00000514307 H7C0C1 242 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 TLR5O60602 858 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 FGF19O95750 216 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 GLUD1P00367 558 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 KRT14P02533 472 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 RBP3P10745 1247 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 GOT1P17174 413 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 AMPD1P23109 780 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 ACTN2P35609 894 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 ATP5OP48047 213 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 TUBP50607 506 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 ERVK-21P61565 698 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 PTK6Q13882 451 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 EMBQ6PCB8 327 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 FBXO38Q6PIJ6 1188 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 RFX8Q6ZV50 586 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 PYROXD2Q8N2H3 581 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 ALLCQ8N6M5 410 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 PQLC3Q8N755 202 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 CASKIN2Q8WXE0 1202 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 SLC39A13Q96H72 371 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 BTN2A3PQ96KV6 586 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 HINFPQ9BQA5 517 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 C17orf80Q9BSJ5 609 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 BRD8Q9H0E9 1235 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 SIK2Q9H0K1 926 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 WHRNQ9P202 907 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 ASIC3Q9UHC3 531 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 HEY1Q9Y5J3 304 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 COL4A6Q14031 1691 aa16.55■□□□□ 0.24
NUP54-214ENST00000514307 TSC2P49815 1807 aa16.54■□□□□ 0.24
NUP54-214ENST00000514307 SLC12A8A0AV02 714 aa16.54■□□□□ 0.24
NUP54-214ENST00000514307 SGK1O00141 431 aa16.54■□□□□ 0.24
NUP54-214ENST00000514307 PAGE1O75459 146 aa16.54■□□□□ 0.24
NUP54-214ENST00000514307 CARSP49589 748 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms