RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 SCNM1Q9BWG6 230 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 GPR174Q9BXC1 333 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 SLC2A11Q9BYW1 496 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 ADAM33Q9BZ11 813 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 CIPCQ9C0C6 399 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 LRRC4Q9HBW1 653 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 ITM2CQ9NQX7 267 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 OLA1Q9NTK5 396 aaKnown RBP12.76□□□□□ -0.37
SNHG4-208ENST00000514110 HESX1Q9UBX0 185 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 ARMCX3Q9UH62 379 aaPredicted RBP12.76□□□□□ -0.37
SNHG4-208ENST00000514110 O00370 1275 aa12.75□□□□□ -0.37
SNHG4-208ENST00000514110 MSI1O43347 362 aaKnown RBP12.75□□□□□ -0.37
SNHG4-208ENST00000514110 SYNCRIPO60506 623 aaKnown RBP12.75□□□□□ -0.37
SNHG4-208ENST00000514110 SMC2O95347 1197 aa12.75□□□□□ -0.37
SNHG4-208ENST00000514110 CALCAP01258 141 aa12.75□□□□□ -0.37
SNHG4-208ENST00000514110 SYPP08247 313 aa12.75□□□□□ -0.37
SNHG4-208ENST00000514110 SETSIPP0DME0 302 aa12.75□□□□□ -0.37
SNHG4-208ENST00000514110 VDRP11473 427 aa12.75□□□□□ -0.37
SNHG4-208ENST00000514110 NCAM1P13591 858 aa12.75□□□□□ -0.37
SNHG4-208ENST00000514110 LCP1P13796 627 aa12.75□□□□□ -0.37
SNHG4-208ENST00000514110 CD59P13987 128 aa12.75□□□□□ -0.37
SNHG4-208ENST00000514110 FMO5P49326 533 aa12.75□□□□□ -0.37
SNHG4-208ENST00000514110 HARS2P49590 506 aaKnown RBP12.75□□□□□ -0.37
SNHG4-208ENST00000514110 ZNF132P52740 706 aa12.75□□□□□ -0.37
SNHG4-208ENST00000514110 SIM1P81133 766 aaPredicted RBP12.75□□□□□ -0.37
SNHG4-208ENST00000514110 LRRC63Q05C16 580 aa12.75□□□□□ -0.37
SNHG4-208ENST00000514110 AKAP13Q12802 2813 aa12.75□□□□□ -0.37
SNHG4-208ENST00000514110 EIF4HQ15056 248 aaKnown RBP12.75□□□□□ -0.37
SNHG4-208ENST00000514110 PLEKHG6Q3KR16 790 aa12.75□□□□□ -0.37
SNHG4-208ENST00000514110 PKDCCQ504Y2 493 aa12.75□□□□□ -0.37
SNHG4-208ENST00000514110 WDR45BQ5MNZ6 344 aa12.75□□□□□ -0.37
SNHG4-208ENST00000514110 ISM2Q6H9L7 571 aa12.75□□□□□ -0.37
SNHG4-208ENST00000514110 CACUL1Q86Y37 369 aa12.75□□□□□ -0.37
SNHG4-208ENST00000514110 WDFY3Q8IZQ1 3526 aa12.75□□□□□ -0.37
SNHG4-208ENST00000514110 RNF139Q8WU17 664 aa12.75□□□□□ -0.37
SNHG4-208ENST00000514110 KCTD13Q8WZ19 329 aa12.75□□□□□ -0.37
SNHG4-208ENST00000514110 GATA6Q92908 595 aa12.75□□□□□ -0.37
SNHG4-208ENST00000514110 FOXJ1Q92949 421 aa12.75□□□□□ -0.37
SNHG4-208ENST00000514110 SIPA1Q96FS4 1042 aa12.75□□□□□ -0.37
SNHG4-208ENST00000514110 ABCC13Q9NSE7 274 aa12.75□□□□□ -0.37
SNHG4-208ENST00000514110 DNAAF2Q9NVR5 837 aaKnown RBP12.75□□□□□ -0.37
SNHG4-208ENST00000514110 HBS1LQ9Y450 684 aaKnown RBP12.75□□□□□ -0.37
SNHG4-208ENST00000514110 GOLGA6L4A6NEF3 574 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 RNF225M0QZC1 329 aaPredicted RBP12.74□□□□□ -0.37
SNHG4-208ENST00000514110 PIK3R2O00459 728 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 HYAL3O43820 417 aaPredicted RBP12.74□□□□□ -0.37
SNHG4-208ENST00000514110 GJB3O75712 270 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 EPHX1P07099 455 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 HLA-EP13747 358 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 CD44P16070 742 aaKnown RBP12.74□□□□□ -0.37
SNHG4-208ENST00000514110 TBXAS1P24557 533 aaPredicted RBP12.74□□□□□ -0.37
SNHG4-208ENST00000514110 HLA-FP30511 346 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 RGS7P49802 495 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 SGSHP51688 502 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 DAOAP59103 153 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 PMF1Q6P1K2 205 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 TMEM270Q6UE05 265 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 LCLAT1Q6UWP7 414 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 SERPINA13PQ6UXR4 307 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 SIX6OS1Q8N1H7 587 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 SCML4Q8N228 414 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 KDF1Q8NAX2 398 aaPredicted RBP12.74□□□□□ -0.37
SNHG4-208ENST00000514110 SLC35F5Q8WV83 523 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 DNASE2BQ8WZ79 361 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 PRCCQ92733 491 aaPredicted RBP12.74□□□□□ -0.37
SNHG4-208ENST00000514110 KAT5Q92993 513 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 CAMK1GQ96NX5 476 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 ZSWIM1Q9BR11 485 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 CNGB3Q9NQW8 809 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 SUSD2Q9UGT4 822 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 STOML2Q9UJZ1 356 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 KIAA1257Q9ULG3 409 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 CKAP5Q14008 2032 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 ZZEF1O43149 2961 aa12.74□□□□□ -0.37
SNHG4-208ENST00000514110 MUC22E2RYF6 1773 aaPredicted RBP12.74□□□□□ -0.37
SNHG4-208ENST00000514110 SPEGQ15772 3267 aa12.73□□□□□ -0.37
SNHG4-208ENST00000514110 MEI4A8MW99 385 aa12.73□□□□□ -0.37
SNHG4-208ENST00000514110 TIMM44O43615 452 aa12.73□□□□□ -0.37
SNHG4-208ENST00000514110 IGLV3-19P01714 112 aa12.73□□□□□ -0.37
SNHG4-208ENST00000514110 PAEPP09466 180 aa12.73□□□□□ -0.37
SNHG4-208ENST00000514110 GNSP15586 552 aa12.73□□□□□ -0.37
SNHG4-208ENST00000514110 GRIK2Q13002 908 aa12.73□□□□□ -0.37
SNHG4-208ENST00000514110 CAMK2GQ13555 558 aaPredicted RBP12.73□□□□□ -0.37
SNHG4-208ENST00000514110 ADGRF1Q5T601 910 aa12.73□□□□□ -0.37
SNHG4-208ENST00000514110 DCAF12L1Q5VU92 463 aa12.73□□□□□ -0.37
SNHG4-208ENST00000514110 MSANTD2Q6P1R3 559 aa12.73□□□□□ -0.37
SNHG4-208ENST00000514110 CHST9Q7L1S5 443 aa12.73□□□□□ -0.37
SNHG4-208ENST00000514110 ADIPOR2Q86V24 386 aa12.73□□□□□ -0.37
SNHG4-208ENST00000514110 ZCCHC9Q8N567 271 aaKnown RBP12.73□□□□□ -0.37
SNHG4-208ENST00000514110 ZNF366Q8N895 744 aa12.73□□□□□ -0.37
SNHG4-208ENST00000514110 CADM4Q8NFZ8 388 aa12.73□□□□□ -0.37
SNHG4-208ENST00000514110 LMO3Q8TAP4 145 aa12.73□□□□□ -0.37
SNHG4-208ENST00000514110 WFDC5Q8TCV5 224 aa12.73□□□□□ -0.37
SNHG4-208ENST00000514110 CLEC4CQ8WTT0 213 aa12.73□□□□□ -0.37
SNHG4-208ENST00000514110 CYB5D2Q8WUJ1 264 aa12.73□□□□□ -0.37
SNHG4-208ENST00000514110 TMA16Q96EY4 203 aaKnown RBP12.73□□□□□ -0.37
SNHG4-208ENST00000514110 TIGD1Q96MW7 591 aa12.73□□□□□ -0.37
SNHG4-208ENST00000514110 NT5C1BQ96P26 610 aa12.73□□□□□ -0.37
SNHG4-208ENST00000514110 METTL14Q9HCE5 456 aaKnown RBP12.73□□□□□ -0.37
SNHG4-208ENST00000514110 ABCB8Q9NUT2 735 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms