RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 JMJD1CQ15652 2540 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 ARHGEF17Q96PE2 2063 aaPredicted RBP8.06□□□□□ -1.12
CLDND1-229ENST00000513988 A0A087WWV3 80 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.05□□□□□ -1.12
CLDND1-229ENST00000513988 LY6G6EA0A0G2JKS1 128 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 HEATR9A2RTY3 570 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 FAM187AA6NFU0 413 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 JMJD7P0C870 316 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 NR1D1P20393 614 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 ACO1P21399 889 aaKnown RBP8.05□□□□□ -1.12
CLDND1-229ENST00000513988 PRR20EP86478 221 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 PRR20CP86479 221 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 PRR20DP86480 221 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 PRR20BP86481 221 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 PRR20AP86496 221 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 ZNF177Q13360 481 aaPredicted RBP8.05□□□□□ -1.12
CLDND1-229ENST00000513988 MRPL49Q13405 166 aaKnown RBP8.05□□□□□ -1.12
CLDND1-229ENST00000513988 SEPT6Q14141 434 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 PDIA5Q14554 519 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 ZBTB6Q15916 424 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 SP5Q6BEB4 398 aaPredicted RBP8.05□□□□□ -1.12
CLDND1-229ENST00000513988 NCEH1Q6PIU2 408 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 CRTC1Q6UUV9 634 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 EFL1Q7Z2Z2 1120 aaKnown RBP8.05□□□□□ -1.12
CLDND1-229ENST00000513988 SPATA2LQ8IUW3 424 aaPredicted RBP8.05□□□□□ -1.12
CLDND1-229ENST00000513988 ADGRF2Q8IZF7 708 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 MFSD2AQ8NA29 543 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 BHMTQ93088 406 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 GTF3C6Q969F1 213 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 EIF2AK1Q9BQI3 630 aaKnown RBP8.05□□□□□ -1.12
CLDND1-229ENST00000513988 TARS2Q9BW92 718 aaKnown RBP8.05□□□□□ -1.12
CLDND1-229ENST00000513988 LRRC2Q9BYS8 371 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 IL25Q9H293 177 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 SYNDIG1Q9H7V2 258 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 LATS2Q9NRM7 1088 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 GJB4Q9NTQ9 266 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 NLGN3Q9NZ94 848 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 EHD2Q9NZN4 543 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 PISDQ9UG56 409 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 SLC5A6Q9Y289 635 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 U3KQA8 63 aa8.05□□□□□ -1.12
CLDND1-229ENST00000513988 PRAMEF33A0A0G2JMD5 474 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 LRRC72A6NJI9 287 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 GOLGA8AA7E2F4 631 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 GOLGA8BA8MQT2 603 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 ZBTB43O43298 467 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 PRAMEF10O60809 474 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 IRF1P10914 325 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 HGFP14210 728 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 PDX1P52945 283 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 GALCP54803 685 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 USP46P62068 366 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 RPS14P62263 151 aaKnown RBP8.04□□□□□ -1.12
CLDND1-229ENST00000513988 GUCA2AQ02747 115 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 ARID5AQ03989 594 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 PPP2R3AQ06190 1150 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 SFSWAPQ12872 951 aaKnown RBP8.04□□□□□ -1.12
CLDND1-229ENST00000513988 CAMK2GQ13555 558 aaPredicted RBP8.04□□□□□ -1.12
CLDND1-229ENST00000513988 SPIDRQ14159 915 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 DHX8Q14562 1220 aaKnown RBP8.04□□□□□ -1.12
CLDND1-229ENST00000513988 CDKN3Q16667 212 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 GUSBP11Q6P575 273 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 DENND5BQ6ZUT9 1274 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 DTX1Q86Y01 620 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 CCDC83Q8IWF9 413 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 ZNF276Q8N554 614 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 WDR48Q8TAF3 677 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 APOBEC4Q8WW27 367 aaKnown RBP8.04□□□□□ -1.12
CLDND1-229ENST00000513988 P2RY11Q96G91 374 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 DUSP9Q99956 384 aaKnown RBP8.04□□□□□ -1.12
CLDND1-229ENST00000513988 STRADBQ9C0K7 418 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.04□□□□□ -1.12
CLDND1-229ENST00000513988 MARK1Q9P0L2 795 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 SNX14Q9Y5W7 946 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 RP1P56715 2156 aa8.04□□□□□ -1.12
CLDND1-229ENST00000513988 TCHHQ07283 1943 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 TDRD6O60522 2096 aaKnown RBP8.03□□□□□ -1.12
CLDND1-229ENST00000513988 A0A1W2PQ27 194 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 A0A1W2PQ64 194 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 A0A1W2PQC6 194 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 TTC26A0AVF1 554 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 ZNF891A8MT65 544 aaPredicted RBP8.03□□□□□ -1.12
CLDND1-229ENST00000513988 TULP1O00294 542 aaPredicted RBP8.03□□□□□ -1.12
CLDND1-229ENST00000513988 ABLIM1O14639 778 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 GIMD1P0DJR0 217 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 XRCC6P12956 609 aaKnown RBP eCLIP8.03□□□□□ -1.12
CLDND1-229ENST00000513988 PROZP22891 400 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 ADRA1BP35368 520 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 LEPRP48357 1165 aaKnown RBP8.03□□□□□ -1.12
CLDND1-229ENST00000513988 ATP1A2P50993 1020 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 CCR5P51681 352 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 SSRP1Q08945 709 aaKnown RBP8.03□□□□□ -1.12
CLDND1-229ENST00000513988 OVGP1Q12889 678 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 KCNJ12Q14500 433 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 GEN1Q17RS7 908 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 CFAP221Q4G0U5 840 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 C9orf57Q5W0N0 161 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 NAPEPLDQ6IQ20 393 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 ASB18Q6ZVZ8 466 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 IQCHQ86VS3 1027 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms