RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 TTLL13PA6NNM8 815 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 BOLA2-SMG1P6H3BVE0 249 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 CD48P09326 243 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 PABPC4LP0CB38 370 aaKnown RBP9.94□□□□□ -0.82
VCAN-210ENST00000513960 MAGEA10P43363 369 aaPredicted RBP9.94□□□□□ -0.82
VCAN-210ENST00000513960 HDAC4P56524 1084 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 CBX3Q13185 183 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 SH3D19Q5HYK7 790 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 TMA16Q96EY4 203 aaKnown RBP9.94□□□□□ -0.82
VCAN-210ENST00000513960 ZNF668Q96K58 619 aaPredicted RBP9.94□□□□□ -0.82
VCAN-210ENST00000513960 ACO2Q99798 780 aaKnown RBP9.94□□□□□ -0.82
VCAN-210ENST00000513960 SPATC1LQ9H0A9 340 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 SEMA6AQ9H2E6 1030 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 PNPOQ9NVS9 261 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 DDX56Q9NY93 547 aaKnown RBP9.94□□□□□ -0.82
VCAN-210ENST00000513960 NDUFA13Q9P0J0 144 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 SRCAPQ6ZRS2 3230 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 CASQ2O14958 399 aaPredicted RBP9.94□□□□□ -0.82
VCAN-210ENST00000513960 ZSCAN9O15535 394 aaPredicted RBP9.94□□□□□ -0.82
VCAN-210ENST00000513960 MSCO60682 206 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 GRAP2O75791 330 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 OSBPP22059 807 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 FDFT1P37268 417 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 PSMC1P62191 440 aaKnown RBP9.94□□□□□ -0.82
VCAN-210ENST00000513960 GRM1Q13255 1194 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 LRRC38Q5VT99 294 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 ZSCAN18Q8TBC5 510 aaPredicted RBP9.94□□□□□ -0.82
VCAN-210ENST00000513960 EME1Q96AY2 570 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 TRPV6Q9H1D0 765 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 SMYD2Q9NRG4 433 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 THEGQ9P2T0 379 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 A0A0J9YVX5 310 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 SOWAHBA6NEL2 793 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 H3BSA7 217 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 GAS2O43903 313 aaKnown RBP9.94□□□□□ -0.82
VCAN-210ENST00000513960 KLHL2O95198 593 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 KRT3P12035 628 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 ZNF132P52740 706 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 VGLL4Q14135 290 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 DPY19L2Q6NUT2 758 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 TRIM50Q86XT4 487 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 LRRC43Q8N309 656 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.94□□□□□ -0.82
VCAN-210ENST00000513960 GPRC5DQ9NZD1 345 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 CDH22Q9UJ99 828 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 PPME1Q9Y570 386 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 ARID2Q68CP9 1835 aa9.94□□□□□ -0.82
VCAN-210ENST00000513960 WDR81Q562E7 1941 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 ZNFX1Q9P2E3 1918 aaKnown RBP9.93□□□□□ -0.82
VCAN-210ENST00000513960 CXorf49A8MYA2 514 aaPredicted RBP9.93□□□□□ -0.82
VCAN-210ENST00000513960 TGDSO95455 350 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 EIF4BP23588 611 aaKnown RBP9.93□□□□□ -0.82
VCAN-210ENST00000513960 STIP1P31948 543 aaKnown RBP9.93□□□□□ -0.82
VCAN-210ENST00000513960 MAPK10P53779 464 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 SLC18A1P54219 525 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 LPCAT2Q7L5N7 544 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 ARHGEF4Q9NR80 690 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 PTTG2Q9NZH5 202 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 ADA2Q9NZK5 511 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 POMPQ9Y244 141 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 MED7O43513 233 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 STRNO43815 780 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 SERPINA6P08185 405 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 FAM58BPP0C7Q3 252 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 PSMD7P51665 324 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 MMRN1Q13201 1228 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 DPYSL3Q14195 570 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 GK3PQ14409 553 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 ATF7IP2Q5U623 682 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 TTC13Q8NBP0 860 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 NLRP7Q8WX94 980 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 CMTM5Q96DZ9 223 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 RNPEPQ9H4A4 650 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 GPAMQ9HCL2 828 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 GPATCH2LQ9NWQ4 482 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 LTBP3Q9NS15 1303 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 A0A088AWK7 358 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 TTC36A6NLP5 189 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 USP2O75604 605 aaPredicted RBP9.93□□□□□ -0.82
VCAN-210ENST00000513960 CSPG5O95196 566 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 SLC1A6P48664 564 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 SESN2P58004 480 aaPredicted RBP9.93□□□□□ -0.82
VCAN-210ENST00000513960 ART3Q13508 389 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 ZNF667Q5HYK9 610 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 N4BP2L1Q5TBK1 243 aaPredicted RBP9.93□□□□□ -0.82
VCAN-210ENST00000513960 SCARA3Q6AZY7 606 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 FBXL19Q6PCT2 694 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 MPZL3Q6UWV2 235 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 CDR2LQ86X02 465 aaPredicted RBP9.93□□□□□ -0.82
VCAN-210ENST00000513960 SLC44A1Q8WWI5 657 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 KCNK16Q96T55 309 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 RPF1Q9H9Y2 349 aaKnown RBP9.93□□□□□ -0.82
VCAN-210ENST00000513960 SLC17A6Q9P2U8 582 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 CPSF3Q9UKF6 684 aaKnown RBP9.93□□□□□ -0.82
VCAN-210ENST00000513960 PLLPQ9Y342 182 aa9.93□□□□□ -0.82
VCAN-210ENST00000513960 ITM2AO43736 263 aa9.92□□□□□ -0.82
VCAN-210ENST00000513960 FOXD2O60548 495 aaPredicted RBP9.92□□□□□ -0.82
VCAN-210ENST00000513960 MSLNQ13421 630 aaPredicted RBP9.92□□□□□ -0.82
VCAN-210ENST00000513960 TLR1Q15399 786 aa9.92□□□□□ -0.82
VCAN-210ENST00000513960 TAF5Q15542 800 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms