RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-215ENST00000513677 EXOC4Q96A65 974 aa6.22□□□□□ -1.41
GYPB-215ENST00000513677 ERLEC1Q96DZ1 483 aa6.22□□□□□ -1.41
GYPB-215ENST00000513677 HSPA12BQ96MM6 686 aa6.22□□□□□ -1.41
GYPB-215ENST00000513677 FERD3LQ96RJ6 166 aa6.22□□□□□ -1.41
GYPB-215ENST00000513677 CYP2S1Q96SQ9 504 aa6.22□□□□□ -1.41
GYPB-215ENST00000513677 MSTO1Q9BUK6 570 aa6.22□□□□□ -1.41
GYPB-215ENST00000513677 GTPBP2Q9BX10 602 aaKnown RBP6.22□□□□□ -1.41
GYPB-215ENST00000513677 TGIF2Q9GZN2 237 aa6.22□□□□□ -1.41
GYPB-215ENST00000513677 ZCWPW1Q9H0M4 648 aa6.22□□□□□ -1.41
GYPB-215ENST00000513677 FOXP1Q9H334 677 aaPredicted RBP6.22□□□□□ -1.41
GYPB-215ENST00000513677 FSCN3Q9NQT6 498 aa6.22□□□□□ -1.41
GYPB-215ENST00000513677 PCDHB6Q9Y5E3 794 aa6.22□□□□□ -1.41
GYPB-215ENST00000513677 DENND4CQ5VZ89 1909 aa6.22□□□□□ -1.41
GYPB-215ENST00000513677 KIAA1549LQ6ZVL6 1849 aa6.22□□□□□ -1.41
GYPB-215ENST00000513677 AKAP13Q12802 2813 aa6.21□□□□□ -1.41
GYPB-215ENST00000513677 ADAMTS9Q9P2N4 1935 aa6.21□□□□□ -1.41
GYPB-215ENST00000513677 TRAV19A0A0A6YYK7 116 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 TISP43B9A030 160 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 RGS13O14921 159 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 EPB41L2O43491 1005 aaKnown RBP6.21□□□□□ -1.42
GYPB-215ENST00000513677 CFIP05156 583 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 KRT18P05783 430 aaKnown RBP6.21□□□□□ -1.42
GYPB-215ENST00000513677 PLA2G4BP0C869 781 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 TCF3P15923 654 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 CYP3A5P20815 502 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 ACAT1P24752 427 aaKnown RBP6.21□□□□□ -1.42
GYPB-215ENST00000513677 GUCY2CP25092 1073 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 POLR2BP30876 1174 aaKnown RBP6.21□□□□□ -1.42
GYPB-215ENST00000513677 AARSP49588 968 aaKnown RBP eCLIP6.21□□□□□ -1.42
GYPB-215ENST00000513677 TAF6P49848 677 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 SIM1P81133 766 aaPredicted RBP6.21□□□□□ -1.42
GYPB-215ENST00000513677 ORC2Q13416 577 aaPredicted RBP6.21□□□□□ -1.42
GYPB-215ENST00000513677 PDIA5Q14554 519 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 ZBTB6Q15916 424 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 IL17AQ16552 155 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 FBXO43Q4G163 708 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 ZC2HC1CQ53FD0 456 aaPredicted RBP6.21□□□□□ -1.42
GYPB-215ENST00000513677 TRIM61Q5EBN2 209 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 SPATA1Q5VX52 437 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 PMS2CLQ68D20 193 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 MCTP1Q6DN14 999 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 C19orf48Q6RUI8 117 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 LRSAM1Q6UWE0 723 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 SYT13Q7L8C5 426 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 NLRC3Q7RTR2 1065 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 TMEM150AQ86TG1 271 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 DCP1BQ8IZD4 617 aaKnown RBP6.21□□□□□ -1.42
GYPB-215ENST00000513677 DEFB119Q8N690 84 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 MYCT1Q8N699 235 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 FRMD1Q8N878 549 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 C4orf32Q8N8J7 132 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 ARL14EPQ8N8R7 260 aaPredicted RBP6.21□□□□□ -1.42
GYPB-215ENST00000513677 IGSF22Q8N9C0 903 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 SPPL2BQ8TCT7 592 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 RNF141Q8WVD5 230 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 ASB11Q8WXH4 323 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 ATP2A3Q93084 1043 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 Q96M66 194 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 KREMEN1Q96MU8 473 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 MMTAG2Q9BU76 263 aaKnown RBP6.21□□□□□ -1.42
GYPB-215ENST00000513677 NUSAP1Q9BXS6 441 aaKnown RBP6.21□□□□□ -1.42
GYPB-215ENST00000513677 ACBD3Q9H3P7 528 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 SLC32A1Q9H598 525 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 CCSER2Q9H7U1 834 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 ECT2Q9H8V3 914 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 KIF9Q9HAQ2 790 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 C17orf75Q9HAS0 396 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 ZDHHC4Q9NPG8 344 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 TMLHEQ9NVH6 421 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 BCCIPQ9P287 314 aaKnown RBP eCLIP6.21□□□□□ -1.42
GYPB-215ENST00000513677 KLK13Q9UKR3 277 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 PPT2Q9UMR5 302 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 ST14Q9Y5Y6 855 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 SCN1AP35498 2009 aa6.21□□□□□ -1.42
GYPB-215ENST00000513677 FAM208BQ5VWN6 2430 aa6.2□□□□□ -1.42
GYPB-215ENST00000513677 ABCA7Q8IZY2 2146 aa6.2□□□□□ -1.42
GYPB-215ENST00000513677 VWA3AA6NCI4 1184 aa6.2□□□□□ -1.42
GYPB-215ENST00000513677 C2orf78A6NCI8 922 aa6.2□□□□□ -1.42
GYPB-215ENST00000513677 TMEM8BA6NDV4 472 aa6.2□□□□□ -1.42
GYPB-215ENST00000513677 ANKRD63C9JTQ0 380 aa6.2□□□□□ -1.42
GYPB-215ENST00000513677 CDX4O14627 284 aaPredicted RBP6.2□□□□□ -1.42
GYPB-215ENST00000513677 UBOX5O94941 541 aa6.2□□□□□ -1.42
GYPB-215ENST00000513677 KLF8O95600 359 aaPredicted RBP6.2□□□□□ -1.42
GYPB-215ENST00000513677 CSH1P0DML2 217 aa6.2□□□□□ -1.42
GYPB-215ENST00000513677 CSH2P0DML3 217 aa6.2□□□□□ -1.42
GYPB-215ENST00000513677 CEACAM1P13688 526 aa6.2□□□□□ -1.42
GYPB-215ENST00000513677 HMGA1P17096 107 aaKnown RBP6.2□□□□□ -1.42
GYPB-215ENST00000513677 ENGP17813 658 aa6.2□□□□□ -1.42
GYPB-215ENST00000513677 CYP2F1P24903 491 aa6.2□□□□□ -1.42
GYPB-215ENST00000513677 DDX6P26196 483 aaKnown RBP eCLIP6.2□□□□□ -1.42
GYPB-215ENST00000513677 ERCC5P28715 1186 aaPredicted RBP6.2□□□□□ -1.42
GYPB-215ENST00000513677 ATXN3P54252 364 aaPredicted RBP6.2□□□□□ -1.42
GYPB-215ENST00000513677 NCKAP1LP55160 1127 aa6.2□□□□□ -1.42
GYPB-215ENST00000513677 TSPY1Q01534 308 aa6.2□□□□□ -1.42
GYPB-215ENST00000513677 KDSRQ06136 332 aa6.2□□□□□ -1.42
GYPB-215ENST00000513677 KCNB1Q14721 858 aa6.2□□□□□ -1.42
GYPB-215ENST00000513677 KYAT1Q16773 422 aa6.2□□□□□ -1.42
GYPB-215ENST00000513677 CCDC142Q17RM4 750 aa6.2□□□□□ -1.42
GYPB-215ENST00000513677 SV2CQ496J9 727 aa6.2□□□□□ -1.42
GYPB-215ENST00000513677 CDCP2Q5VXM1 449 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms