RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 NUMBLQ9Y6R0 609 aa7.9□□□□□ -1.14
HMGXB3-204ENST00000513318 ANKRD36A6QL64 1941 aa7.9□□□□□ -1.15
HMGXB3-204ENST00000513318 A0A0A6YYK5 440 aaPredicted RBP7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 E2F8A0AVK6 867 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 TMEM191CA6NGB0 347 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 HEPACAM2A8MVW5 462 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 LEFTY2O00292 366 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 SLC9A3R1O14745 358 aaPredicted RBP7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 PJA2O43164 708 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 CCP110O43303 1012 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 MSI1O43347 362 aaKnown RBP7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 STC2O76061 302 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 MTA2O94776 668 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 LATS1O95835 1130 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 F9P00740 461 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 APOEP02649 317 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 CCDC175P0C221 793 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 IRF1P10914 325 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 SLC2A3P11169 496 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 PDGFRAP16234 1089 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 PSMC3P17980 439 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 NDUFV2P19404 249 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 PSMA2P25787 234 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 RDXP35241 583 aaKnown RBP7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 ZNF143P52747 638 aaPredicted RBP7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 TBX4P57082 545 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 PITX1P78337 314 aaPredicted RBP7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 ZXDBP98169 803 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 GUCA2AQ02747 115 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 KCNC4Q03721 635 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 DEUP1Q05D60 604 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 FCHO2Q0JRZ9 810 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 MTA1Q13330 715 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 EIF4EBP2Q13542 120 aaPredicted RBP7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 PIGHQ14442 188 aaPredicted RBP7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 ACAP1Q15027 740 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 TCEAL1Q15170 157 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 CDO1Q16878 200 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 CCDC14Q49A88 953 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 BRMS1LQ5PSV4 323 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 OTUD1Q5VV17 481 aaPredicted RBP7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 TANGO2Q6ICL3 276 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 PARM1Q6UWI2 310 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 VITQ6UXI7 678 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 SND1Q7KZF4 910 aaKnown RBP eCLIP7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 BNIPLQ7Z465 357 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 KIAA1328Q86T90 577 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 MFSD6LQ8IWD5 586 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 UNC45BQ8IWX7 931 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 ADAM32Q8TC27 787 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 ADAMTS19Q8TE59 1207 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 OTUB2Q96DC9 234 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 SLC39A13Q96H72 371 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 TBCBQ99426 244 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 NCAPGQ9BPX3 1015 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 KXD1Q9BQD3 176 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 DESI2Q9BSY9 194 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 CNPY3Q9BT09 278 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 DCLK3Q9C098 648 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 SMG9Q9H0W8 520 aaKnown RBP7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 PLA2G2EQ9NZK7 142 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 CFAP97Q9P2B7 532 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 TBC1D14Q9P2M4 693 aa7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 LSM7Q9UK45 103 aaKnown RBP7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 REXO2Q9Y3B8 237 aaKnown RBP7.89□□□□□ -1.15
HMGXB3-204ENST00000513318 SYNJ2BP-COX16A0A087WUM0 186 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 BTNL10A8MVZ5 291 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 MYO1FO00160 1098 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 CHADO15335 359 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 RNF8O76064 485 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 ENDOD1O94919 500 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 HMBSP08397 361 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 TFE3P19532 575 aaPredicted RBP7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 CORO1AP31146 461 aaKnown RBP7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 CCR1P32246 355 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 VIPR2P41587 438 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 IFNAR2P48551 515 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 HARS2P49590 506 aaKnown RBP7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 HADHBP55084 474 aaKnown RBP7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 ATP11AP98196 1134 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 OGDHQ02218 1023 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 ZNF252P-AS1Q0IIN9 211 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 KIF5AQ12840 1032 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 NME3Q13232 169 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 PPP2R5DQ14738 602 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 C15orf59Q2T9L4 293 aaPredicted RBP7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 ARHGAP29Q52LW3 1261 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 CC2D1AQ6P1N0 951 aaPredicted RBP7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 Q6ZNB5 142 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 HTR3DQ70Z44 454 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 YAF2Q8IY57 180 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 NIPA2Q8N8Q9 360 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 ATP6V0D2Q8N8Y2 350 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 TTC16Q8NEE8 873 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 RIN3Q8TB24 985 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 SLC35G2Q8TBE7 412 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 FAM172AQ8WUF8 416 aa7.88□□□□□ -1.15
HMGXB3-204ENST00000513318 CENPIQ92674 756 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms