RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 FAM26FQ5R3K3 315 aa19.94■□□□□ 0.78
HMGCS1-206ENST00000511774 DENND1CQ8IV53 801 aa19.94■□□□□ 0.78
HMGCS1-206ENST00000511774 SNIP1Q8TAD8 396 aaKnown RBP19.94■□□□□ 0.78
HMGCS1-206ENST00000511774 PARD3BQ8TEW8 1205 aa19.94■□□□□ 0.78
HMGCS1-206ENST00000511774 HNRNPABQ99729 332 aaKnown RBP19.94■□□□□ 0.78
HMGCS1-206ENST00000511774 KBTBD4Q9NVX7 518 aa19.94■□□□□ 0.78
HMGCS1-206ENST00000511774 RASAL2Q9UJF2 1139 aa19.94■□□□□ 0.78
HMGCS1-206ENST00000511774 PCDHGA1Q9Y5H4 931 aa19.94■□□□□ 0.78
HMGCS1-206ENST00000511774 PCDHA5Q9Y5H7 936 aa19.94■□□□□ 0.78
HMGCS1-206ENST00000511774 AK5Q9Y6K8 562 aa19.94■□□□□ 0.78
HMGCS1-206ENST00000511774 VPS37CA5D8V6 355 aaPredicted RBP19.93■□□□□ 0.78
HMGCS1-206ENST00000511774 CASP1P29466 404 aa19.93■□□□□ 0.78
HMGCS1-206ENST00000511774 HLA-FP30511 346 aa19.93■□□□□ 0.78
HMGCS1-206ENST00000511774 CHKAP35790 457 aa19.93■□□□□ 0.78
HMGCS1-206ENST00000511774 DLG4P78352 724 aa19.93■□□□□ 0.78
HMGCS1-206ENST00000511774 CLDN10P78369 228 aa19.93■□□□□ 0.78
HMGCS1-206ENST00000511774 EHHADHQ08426 723 aa19.93■□□□□ 0.78
HMGCS1-206ENST00000511774 EFEMP1Q12805 493 aa19.93■□□□□ 0.78
HMGCS1-206ENST00000511774 C6orf118Q5T5N4 469 aa19.93■□□□□ 0.78
HMGCS1-206ENST00000511774 HES3Q5TGS1 186 aa19.93■□□□□ 0.78
HMGCS1-206ENST00000511774 FBXL19Q6PCT2 694 aa19.93■□□□□ 0.78
HMGCS1-206ENST00000511774 LRRC69Q6ZNQ3 347 aa19.93■□□□□ 0.78
HMGCS1-206ENST00000511774 CCDC186Q7Z3E2 898 aa19.93■□□□□ 0.78
HMGCS1-206ENST00000511774 FAM217AQ8IXS0 508 aa19.93■□□□□ 0.78
HMGCS1-206ENST00000511774 ZNF276Q8N554 614 aa19.93■□□□□ 0.78
HMGCS1-206ENST00000511774 CNDP2Q96KP4 475 aaKnown RBP19.93■□□□□ 0.78
HMGCS1-206ENST00000511774 SLC6A18Q96N87 628 aa19.93■□□□□ 0.78
HMGCS1-206ENST00000511774 BTBD1Q9H0C5 482 aa19.93■□□□□ 0.78
HMGCS1-206ENST00000511774 MTG2Q9H4K7 406 aa19.93■□□□□ 0.78
HMGCS1-206ENST00000511774 PRSS16Q9NQE7 514 aa19.93■□□□□ 0.78
HMGCS1-206ENST00000511774 ZNF510Q9Y2H8 683 aa19.93■□□□□ 0.78
HMGCS1-206ENST00000511774 PTPN13Q12923 2485 aa19.92■□□□□ 0.78
HMGCS1-206ENST00000511774 WNT9AO14904 365 aa19.92■□□□□ 0.78
HMGCS1-206ENST00000511774 RFPL3O75679 317 aa19.92■□□□□ 0.78
HMGCS1-206ENST00000511774 CLSTN1O94985 981 aa19.92■□□□□ 0.78
HMGCS1-206ENST00000511774 HOXD9P28356 352 aaPredicted RBP19.92■□□□□ 0.78
HMGCS1-206ENST00000511774 TLE3Q04726 772 aa19.92■□□□□ 0.78
HMGCS1-206ENST00000511774 C12orf56Q8IXR9 622 aa19.92■□□□□ 0.78
HMGCS1-206ENST00000511774 TSC1Q92574 1164 aa19.92■□□□□ 0.78
HMGCS1-206ENST00000511774 TNMDQ9H2S6 317 aa19.92■□□□□ 0.78
HMGCS1-206ENST00000511774 USP3Q9Y6I4 520 aa19.92■□□□□ 0.78
HMGCS1-206ENST00000511774 PYCARD-AS1I3L0S3 204 aa19.91■□□□□ 0.78
HMGCS1-206ENST00000511774 J3QKU1 62 aa19.91■□□□□ 0.78
HMGCS1-206ENST00000511774 VILLO15195 856 aa19.91■□□□□ 0.78
HMGCS1-206ENST00000511774 LDOC1O95751 146 aaPredicted RBP19.91■□□□□ 0.78
HMGCS1-206ENST00000511774 ASIC1P78348 528 aa19.91■□□□□ 0.78
HMGCS1-206ENST00000511774 CFHR1Q03591 330 aa19.91■□□□□ 0.78
HMGCS1-206ENST00000511774 C8orf34Q49A92 452 aa19.91■□□□□ 0.78
HMGCS1-206ENST00000511774 FNDC3BQ53EP0 1204 aaKnown RBP19.91■□□□□ 0.78
HMGCS1-206ENST00000511774 GPR155Q7Z3F1 870 aa19.91■□□□□ 0.78
HMGCS1-206ENST00000511774 ADIPOR2Q86V24 386 aa19.91■□□□□ 0.78
HMGCS1-206ENST00000511774 UNC93AQ86WB7 457 aa19.91■□□□□ 0.78
HMGCS1-206ENST00000511774 CPXM2Q8N436 756 aa19.91■□□□□ 0.78
HMGCS1-206ENST00000511774 SAP25Q8TEE9 199 aa19.91■□□□□ 0.78
HMGCS1-206ENST00000511774 DDI1Q8WTU0 396 aa19.91■□□□□ 0.78
HMGCS1-206ENST00000511774 CYFIP2Q96F07 1278 aa19.91■□□□□ 0.78
HMGCS1-206ENST00000511774 USP28Q96RU2 1077 aa19.91■□□□□ 0.78
HMGCS1-206ENST00000511774 NRSN2Q9GZP1 204 aa19.91■□□□□ 0.78
HMGCS1-206ENST00000511774 PNPLA8Q9NP80 782 aa19.91■□□□□ 0.78
HMGCS1-206ENST00000511774 CLIC5Q9NZA1 410 aa19.91■□□□□ 0.78
HMGCS1-206ENST00000511774 SERGEFQ9UGK8 458 aa19.91■□□□□ 0.78
HMGCS1-206ENST00000511774 DOCK9Q9BZ29 2069 aa19.91■□□□□ 0.78
HMGCS1-206ENST00000511774 RRP8O43159 456 aaKnown RBP19.9■□□□□ 0.78
HMGCS1-206ENST00000511774 BRINP1O60477 761 aa19.9■□□□□ 0.78
HMGCS1-206ENST00000511774 EXOC3O60645 756 aa19.9■□□□□ 0.78
HMGCS1-206ENST00000511774 HNF1BP35680 557 aa19.9■□□□□ 0.78
HMGCS1-206ENST00000511774 COG7P83436 770 aa19.9■□□□□ 0.78
HMGCS1-206ENST00000511774 CCDC173Q0VFZ6 552 aa19.9■□□□□ 0.78
HMGCS1-206ENST00000511774 ADAT2Q7Z6V5 191 aaKnown RBP19.9■□□□□ 0.78
HMGCS1-206ENST00000511774 EID2Q8N6I1 236 aa19.9■□□□□ 0.78
HMGCS1-206ENST00000511774 ENGASEQ8NFI3 743 aa19.9■□□□□ 0.78
HMGCS1-206ENST00000511774 WFDC5Q8TCV5 224 aa19.9■□□□□ 0.78
HMGCS1-206ENST00000511774 ELF4Q99607 663 aaPredicted RBP19.9■□□□□ 0.78
HMGCS1-206ENST00000511774 SLC2A11Q9BYW1 496 aa19.9■□□□□ 0.78
HMGCS1-206ENST00000511774 DCLK3Q9C098 648 aa19.9■□□□□ 0.78
HMGCS1-206ENST00000511774 SEMA4CQ9C0C4 833 aa19.9■□□□□ 0.78
HMGCS1-206ENST00000511774 TEX51A0A1B0GUA7 166 aa19.89■□□□□ 0.77
HMGCS1-206ENST00000511774 C10orf142B7Z368 130 aa19.89■□□□□ 0.77
HMGCS1-206ENST00000511774 TIMM44O43615 452 aa19.89■□□□□ 0.77
HMGCS1-206ENST00000511774 UBE4BO95155 1302 aa19.89■□□□□ 0.77
HMGCS1-206ENST00000511774 ASS1P00966 412 aaKnown RBP19.89■□□□□ 0.77
HMGCS1-206ENST00000511774 SGSHP51688 502 aa19.89■□□□□ 0.77
HMGCS1-206ENST00000511774 BCAT1P54687 386 aa19.89■□□□□ 0.77
HMGCS1-206ENST00000511774 RACK1P63244 317 aaKnown RBP19.89■□□□□ 0.77
HMGCS1-206ENST00000511774 INCA1Q0VD86 236 aa19.89■□□□□ 0.77
HMGCS1-206ENST00000511774 KCNJ12Q14500 433 aa19.89■□□□□ 0.77
HMGCS1-206ENST00000511774 SLC39A14Q15043 492 aa19.89■□□□□ 0.77
HMGCS1-206ENST00000511774 INAVAQ3KP66 663 aa19.89■□□□□ 0.77
HMGCS1-206ENST00000511774 ZACNQ401N2 412 aa19.89■□□□□ 0.77
HMGCS1-206ENST00000511774 C1orf220Q5T0J3 134 aa19.89■□□□□ 0.77
HMGCS1-206ENST00000511774 KIAA0895LQ68EN5 471 aa19.89■□□□□ 0.77
HMGCS1-206ENST00000511774 CNNM4Q6P4Q7 775 aa19.89■□□□□ 0.77
HMGCS1-206ENST00000511774 CHST9Q7L1S5 443 aa19.89■□□□□ 0.77
HMGCS1-206ENST00000511774 ERICH1Q86X53 443 aa19.89■□□□□ 0.77
HMGCS1-206ENST00000511774 SPACA3Q8IXA5 215 aa19.89■□□□□ 0.77
HMGCS1-206ENST00000511774 ARID3AQ99856 593 aa19.89■□□□□ 0.77
HMGCS1-206ENST00000511774 APOBEC3GQ9HC16 384 aaKnown RBP19.89■□□□□ 0.77
HMGCS1-206ENST00000511774 A0A1W2PPC4 97 aa19.88■□□□□ 0.77
HMGCS1-206ENST00000511774 A0A1W2PR77 199 aa19.88■□□□□ 0.77
HMGCS1-206ENST00000511774 SLC12A8A0AV02 714 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms