RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 CLK2P49760 499 aaKnown RBP5.93□□□□□ -1.46
USP38-203ENST00000511739 TBX4P57082 545 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 LPIN1Q14693 890 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 TBC1D25Q3MII6 688 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 ARSJQ5FYB0 599 aaPredicted RBP5.93□□□□□ -1.46
USP38-203ENST00000511739 ZNF618Q5T7W0 954 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 SUGP1Q8IWZ8 645 aaKnown RBP5.93□□□□□ -1.46
USP38-203ENST00000511739 FIBCD1Q8N539 461 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 SYTL5Q8TDW5 730 aaPredicted RBP5.93□□□□□ -1.46
USP38-203ENST00000511739 CPB2Q96IY4 423 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 SLC4A9Q96Q91 983 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 SIKE1Q9BRV8 207 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 KIFC1Q9BW19 673 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 SHCBP1LQ9BZQ2 653 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 STK39Q9UEW8 545 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 OR10H1Q9Y4A9 318 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 GPSM3Q9Y4H4 160 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 hCG_2014768A0A024R1R8 64 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 LINC00854A0A1B0GVQ3 168 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 WWP2O00308 870 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 OR10H2O60403 315 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 PHF2O75151 1096 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 CDH16O75309 829 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 ANXA5P08758 320 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 VDRP11473 427 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 S100GP29377 79 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 SERPINB1P30740 379 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 BCL2L1Q07817 233 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 DEFB115Q30KQ5 88 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 ATP13A4Q4VNC1 1196 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 MPZL3Q6UWV2 235 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 DENND5BQ6ZUT9 1274 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 SMIM5Q71RC9 77 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 CLEC10AQ8IUN9 316 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 DAGLBQ8NCG7 672 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 USP6NLQ92738 828 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 ZNF558Q96NG5 402 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 CNPY3Q9BT09 278 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 FICDQ9BVA6 458 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 DPY30Q9C005 99 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 ILKAPQ9H0C8 392 aaPredicted RBP5.92□□□□□ -1.46
USP38-203ENST00000511739 SALL1Q9NSC2 1324 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 MSCO60682 206 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 RAMP2O60895 175 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 RTN3O95197 1032 aaPredicted RBP5.92□□□□□ -1.46
USP38-203ENST00000511739 ZNF7P17097 686 aaPredicted RBP5.92□□□□□ -1.46
USP38-203ENST00000511739 CCR1P32246 355 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 GRIK3Q13003 919 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 SNAP47Q5SQN1 464 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 SERPINA13PQ6UXR4 307 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 C16orf86Q6ZW13 317 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 MARK2Q7KZI7 788 aaKnown RBP5.92□□□□□ -1.46
USP38-203ENST00000511739 COL26A1Q96A83 441 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 FAM120BQ96EK7 910 aaKnown RBP5.92□□□□□ -1.46
USP38-203ENST00000511739 RMND5BQ96G75 393 aaPredicted RBP5.92□□□□□ -1.46
USP38-203ENST00000511739 FRMD8Q9BZ67 464 aaPredicted RBP5.92□□□□□ -1.46
USP38-203ENST00000511739 KLHL1Q9NR64 748 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 DDX43Q9NXZ2 648 aaKnown RBP5.92□□□□□ -1.46
USP38-203ENST00000511739 SETD1AO15047 1707 aaKnown RBP5.92□□□□□ -1.46
USP38-203ENST00000511739 GPR75-ASB3A0A0A6YYF3 556 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 ANKDD1BA6NHY2 528 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.92□□□□□ -1.46
USP38-203ENST00000511739 TCP11X1B4DZS4 312 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 H7C0S8 307 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 AP3D1O14617 1153 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 OR1E1P30953 314 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 HOXC12P31275 282 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 MAGEA10P43363 369 aaPredicted RBP5.92□□□□□ -1.46
USP38-203ENST00000511739 SRSF11Q05519 484 aaKnown RBP5.92□□□□□ -1.46
USP38-203ENST00000511739 KLC1Q07866 573 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 NFIAQ12857 509 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 COX10Q12887 443 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 MTM1Q13496 603 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 RPTNQ6XPR3 784 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 TPGS1Q6ZTW0 290 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 SPATA21Q7Z572 469 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 ATG16L2Q8NAA4 619 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 IPCEF1Q8WWN9 437 aaPredicted RBP5.92□□□□□ -1.46
USP38-203ENST00000511739 CLCC1Q96S66 551 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 RACGAP1Q9H0H5 632 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 C17orf75Q9HAS0 396 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 MED1Q15648 1581 aaPredicted RBP5.92□□□□□ -1.46
USP38-203ENST00000511739 LOC100653049A0A140TA62 436 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 GRXCR2A6NFK2 248 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 H3BRB1 525 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 GCATO75600 419 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 KRT34O76011 436 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 RRM1P23921 792 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 GPR15P49685 360 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 CLCN6P51797 869 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 GALCP54803 685 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 TGFB2P61812 414 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 NFYCQ13952 458 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 NR6A1Q15406 480 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 SEZ6Q53EL9 994 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 ZC2HC1CQ53FD0 456 aaPredicted RBP5.92□□□□□ -1.46
USP38-203ENST00000511739 MARC1Q5VT66 337 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 JAMLQ86YT9 394 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 IZUMO1Q8IYV9 350 aa5.92□□□□□ -1.46
USP38-203ENST00000511739 DNAJB3Q8WWF6 145 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms