RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 TMEM108Q6UXF1 575 aa4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 GRASPQ7Z6J2 395 aaPredicted RBP4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 FAM109AQ8N4B1 249 aa4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 PARD3BQ8TEW8 1205 aa4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 ZKSCAN4Q969J2 545 aaPredicted RBP4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 OSBPL9Q96SU4 736 aa4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 MS4A7Q9GZW8 240 aaPredicted RBP4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 KCTD5Q9NXV2 234 aa4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 DCHS1Q96JQ0 3298 aa4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 FLT4P35916 1363 aa4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 WDFY4Q6ZS81 3184 aa4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 XIRP2A4UGR9 3374 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 SALL3Q9BXA9 1300 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 YDJCA8MPS7 323 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 PSMD14O00487 310 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 KPNA5O15131 536 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 PEX1O43933 1283 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 RBMXL2O75526 392 aaKnown RBP4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 ALADP13716 330 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 IL1R1P14778 569 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 KLRC1P26715 233 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 LILRA4P59901 499 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 TFF2Q03403 129 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 RRS1Q15050 365 aaKnown RBP4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 SHHQ15465 462 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 LONRF1Q17RB8 773 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 ZIK1Q3SY52 487 aaPredicted RBP4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 CRY2Q49AN0 593 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 PLA1AQ53H76 456 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 EPHA10Q5JZY3 1008 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 RBM20Q5T481 1227 aaKnown RBP4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 LAYNQ6UX15 382 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 DGLUCYQ7Z3D6 616 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 DPP9Q86TI2 863 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 ZNF280BQ86YH2 543 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 SRRM1Q8IYB3 904 aaKnown RBP4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 SAMD3Q8N6K7 520 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 RNF152Q8N8N0 203 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 SLC30A5Q8TAD4 765 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 SPSB4Q96A44 273 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 ZC3H10Q96K80 434 aaKnown RBP4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 NELL2Q99435 816 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 ELAC2Q9BQ52 826 aaKnown RBP4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 CHST8Q9H2A9 424 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 PNPLA8Q9NP80 782 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 XPNPEP3Q9NQH7 507 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 SHOC2Q9UQ13 582 aa4.23□□□□□ -1.73
TOPBP1-208ENST00000511439 POM121BA6NF01 834 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 PROM1O43490 865 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 MT-ND5P03915 603 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 PARP1P09874 1014 aaKnown RBP4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 IFIT2P09913 472 aaKnown RBP4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 TXNP10599 105 aaKnown RBP4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 PPP3CBP16298 524 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 TSHRP16473 764 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 CD6P30203 668 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 PPIFP30405 207 aaKnown RBP4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 LRPAP1P30533 357 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 HTR3AP46098 478 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 FOXF2Q12947 444 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 SF3B3Q15393 1217 aaKnown RBP4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 MGAT5BQ3V5L5 792 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 VPS53Q5VIR6 699 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 KIAA1614Q5VZ46 1190 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 PAPD7Q5XG87 772 aaKnown RBP4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 SFRP4Q6FHJ7 346 aaPredicted RBP4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 ZDHHC24Q6UX98 284 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 GLCCI1Q86VQ1 547 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 SSH3Q8TE77 659 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 SMG7Q92540 1137 aaKnown RBP4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 TNIP3Q96KP6 325 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 SNX22Q96L94 193 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 UROC1Q96N76 676 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 MYD88Q99836 296 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 PTDSS2Q9BVG9 487 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 COLEC11Q9BWP8 271 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 AMBRA1Q9C0C7 1298 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 STARD7Q9NQZ5 370 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 ZSCAN32Q9NX65 697 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 ZSWIM8A7E2V4 1837 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 REV3LO60673 3130 aa4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 COL3A1P02461 1466 aaPredicted RBP4.22□□□□□ -1.73
TOPBP1-208ENST00000511439 GPR179Q6PRD1 2367 aa4.21□□□□□ -1.73
TOPBP1-208ENST00000511439 SETXQ7Z333 2677 aaKnown RBP4.21□□□□□ -1.73
TOPBP1-208ENST00000511439 LRRC37A2A6NM11 1700 aa4.21□□□□□ -1.73
TOPBP1-208ENST00000511439 RASA4BC9J798 803 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 hCG_1984214I3L0E3 225 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 TCERG1O14776 1098 aaKnown RBP4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 CCP110O43303 1012 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 RASA4O43374 803 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 TLR2O60603 784 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 PEX14O75381 377 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 CAMTA2O94983 1202 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 STARD3NLO95772 234 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 ERBB2P04626 1255 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 ANXA2P07355 339 aaKnown RBP4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 FOLR3P41439 243 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 PSMC4P43686 418 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 STT3AP46977 705 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms