RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 INTS6LQ5JSJ4 861 aaKnown RBP4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 HP1BP3Q5SSJ5 553 aaPredicted RBP4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 ZNF697Q5TEC3 545 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 GKAP1Q5VSY0 366 aaPredicted RBP4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 FAM171BQ6P995 826 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 KCNT2Q6UVM3 1135 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 DSTYKQ6XUX3 929 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 RGS9BPQ6ZS82 235 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 CAPN12Q6ZSI9 719 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 ARHGEF18Q6ZSZ5 1173 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 RFX8Q6ZV50 586 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 BEND5Q7L4P6 421 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 PIGWQ7Z7B1 504 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 ECHDC2Q86YB7 292 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 ANKMY2Q8IV38 441 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 IGDCC3Q8IVU1 814 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 LRRC34Q8IZ02 419 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 CACNA2D3Q8IZS8 1091 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 VPS52Q8N1B4 723 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 PYROXD2Q8N2H3 581 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 AGGF1Q8N302 714 aaeCLIP4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 TAB3Q8N5C8 712 aaPredicted RBP4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 ANKRD42Q8N9B4 389 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 RNF169Q8NCN4 708 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 SMC1BQ8NDV3 1235 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 CCDC110Q8TBZ0 833 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 MGARPQ8TDB4 240 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 DENND1AQ8TEH3 1009 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 FBF1Q8TES7 1133 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 PYROXD1Q8WU10 500 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 MZB1Q8WU39 189 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 DCAKDQ8WVC6 231 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 CKAP2Q8WWK9 683 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 LINC01599Q8WXQ3 324 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 IRGQQ8WZA9 623 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 NDRG1Q92597 394 aaKnown RBP4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 LRRC39Q96DD0 335 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 PGBD4Q96DM1 585 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 PGAP3Q96FM1 320 aaPredicted RBP4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 SEC16BQ96JE7 1060 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 SUSD3Q96L08 255 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 SPATA13Q96N96 652 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 PRMT1Q99873 361 aaKnown RBP4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 ACBD6Q9BR61 282 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 PAAF1Q9BRP4 392 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 KLC2Q9H0B6 622 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 TRABDQ9H4I3 376 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 PLAC1Q9HBJ0 212 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 CSNK1G1Q9HCP0 422 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 WDR6Q9NNW5 1121 aaKnown RBP4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 PNPLA8Q9NP80 782 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 DMAP1Q9NPF5 467 aaPredicted RBP4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 EIF2B3Q9NR50 452 aaKnown RBP4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 RAB6BQ9NRW1 208 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 PIGVQ9NUD9 493 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 TRMT13Q9NUP7 481 aaKnown RBP4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 ETNK2Q9NVF9 386 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 NKIRAS1Q9NYS0 192 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 RRN3Q9NYV6 651 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 SRRDQ9UH36 339 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 TBK1Q9UHD2 729 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 CHMP2BQ9UQN3 213 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 MFHAS1Q9Y4C4 1052 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 TTLL3Q9Y4R7 772 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 HEY1Q9Y5J3 304 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 TIMM13Q9Y5L4 95 aaPredicted RBP4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 TEX264Q9Y6I9 313 aa4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 TRIP12Q14669 1992 aaPredicted RBP4.93□□□□□ -1.62
PDLIM5-214ENST00000510099 TCRBV9S1A1TA0A576 114 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 ARHGEF37A1IGU5 675 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 MOXD2PA6NHM9 499 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 YJEFN3A6XGL0 299 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 E7ENQ6 273 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 POC1B-GALNT4F8VUJ3 575 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 TMEM189-UBE2V1I3L0A0 370 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 I6L893 689 aaPredicted RBP4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 M0QYT0 321 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 TYROBPO43914 113 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 B4GALT3O60512 393 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 OPHN1O60890 802 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 FAM155BO75949 473 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 B3GAT3O94766 335 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 STK10O94804 968 aaKnown RBP4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 FSBPO95073 299 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 MAP3K6O95382 1288 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 ASMTLO95671 621 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 CPP00450 1065 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 POMCP01189 267 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 IGLV3-25P01717 112 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 GSTA2P09210 222 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 ATP2A2P16615 1042 aaKnown RBP4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 AMPD1P23109 780 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 SSTR1P30872 391 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 ADRA1BP35368 520 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 FDFT1P37268 417 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 ELK3P41970 407 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 BRCC3P46736 316 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 IFNAR2P48551 515 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 HCAR3P49019 387 aa4.92□□□□□ -1.62
PDLIM5-214ENST00000510099 GLUD2P49448 558 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms