RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 ALG5Q9Y673 324 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 PNPLA7Q6ZV29 1317 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 WDR19Q8NEZ3 1342 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 RFX7Q2KHR2 1363 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 KIAA0232Q92628 1395 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 ZMYM2Q9UBW7 1377 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 EFCAB7A8K855 629 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 LGALS16A8MUM7 142 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 FOXN3O00409 490 aaPredicted RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 AIM2O14862 343 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 SLC22A1O15245 554 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 ATMINO43313 823 aaPredicted RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 CHST10O43529 356 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 FAM20BO75063 409 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 RASGRP1O95267 797 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 CD2P06729 351 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 ENO1P06733 434 aaKnown RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 CRABP2P29373 138 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 DNAJA1P31689 397 aaKnown RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 IREB2P48200 963 aaKnown RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 PTDSS1P48651 473 aaKnown RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 PSEN1P49768 467 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 MCCD1P59942 119 aaPredicted RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 DEFA6Q01524 100 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 MCL1Q07820 350 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 COBLL1Q53SF7 1204 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 MPP7Q5T2T1 576 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 FAM182BQ5T319 152 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 EGFLAMQ63HQ2 1017 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 ZNF425Q6IV72 752 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 DNAJC14Q6Y2X3 702 aaPredicted RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 MOB1BQ7L9L4 216 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 ADHFE1Q8IWW8 467 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 ZBED8Q8IZ13 594 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 PHACTR4Q8IZ21 702 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 REXO1Q8N1G1 1221 aaKnown RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 DCLK2Q8N568 766 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 DPP10Q8N608 796 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 PACRGLQ8N7B6 248 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 MB21D1Q8N884 522 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 ATAD1Q8NBU5 361 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 SRFBP1Q8NEF9 429 aaKnown RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 SPATA4Q8NEY3 305 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 RPLP0P6Q8NHW5 317 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 ZNF75CPQ92670 426 aaPredicted RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 PTPRN2Q92932 1015 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 E2F7Q96AV8 911 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 FKBP10Q96AY3 582 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 PGBD4Q96DM1 585 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 PGM2Q96G03 612 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 CNOT6LQ96LI5 555 aaKnown RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 NSMCE3Q96MG7 304 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 FOPNLQ96NB1 174 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 CCDC115Q96NT0 180 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 PRMT1Q99873 361 aaKnown RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 LRRC1Q9BTT6 524 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 FUT8Q9BYC5 575 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 MRPL9Q9BYD2 267 aaKnown RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 USP44Q9H0E7 712 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 QRSL1Q9H0R6 528 aaKnown RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 ALDH8A1Q9H2A2 487 aaPredicted RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 PPA2Q9H2U2 334 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 DSN1Q9H410 356 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 C1orf115Q9H7X2 142 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 KANSL2Q9H9L4 492 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 MLXIPQ9HAP2 919 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 GPCPD1Q9NPB8 672 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 PDGFCQ9NRA1 345 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 RYDENQ9NUL5 291 aaKnown RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 KCNK4Q9NYG8 393 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 WHRNQ9P202 907 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 SUCOQ9UBS9 1254 aaKnown RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 ANAPC2Q9UJX6 822 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 CDH9Q9ULB4 789 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 RAB23Q9ULC3 237 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 ACSL5Q9ULC5 683 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 PALD1Q9ULE6 856 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 CORO2BQ9UQ03 480 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 INPP5FQ9Y2H2 1132 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 PCDHGB6Q9Y5F9 930 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 PCYT1BQ9Y5K3 369 aaPredicted RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 SNX13Q9Y5W8 968 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 ADGRG1Q9Y653 693 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 ANKRD50Q9ULJ7 1429 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 hCG_1642624A0A1W2PR95 340 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 C1orf196B1AJZ1 125 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 UBXN8O00124 270 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 MYL12BO14950 172 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 INPPL1O15357 1258 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 MSH4O15457 936 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 KRT34O76011 436 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 DDAH1O94760 285 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 RECQL5O94762 991 aaPredicted RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 ASNSP08243 561 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 HSMCR30P0CW71 290 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 ATP6V1B1P15313 513 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 RBL1P28749 1068 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 PRDX6P30041 224 aa3.66□□□□□ -1.82
USP53-205ENST00000509769 SPRP35270 261 aaPredicted RBP3.66□□□□□ -1.82
USP53-205ENST00000509769 PLA2G5P39877 138 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms