RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 THAP9Q9H5L6 903 aa18.69■□□□□ 0.58
TPM3-220ENST00000509601 ST7Q9NRC1 585 aa18.69■□□□□ 0.58
TPM3-220ENST00000509601 CALCOCO1Q9P1Z2 691 aa18.69■□□□□ 0.58
TPM3-220ENST00000509601 APEX2Q9UBZ4 518 aa18.69■□□□□ 0.58
TPM3-220ENST00000509601 AJAP1Q9UKB5 411 aaPredicted RBP18.69■□□□□ 0.58
TPM3-220ENST00000509601 NAALADL1Q9UQQ1 740 aa18.69■□□□□ 0.58
TPM3-220ENST00000509601 PAPSS1O43252 624 aaPredicted RBP18.68■□□□□ 0.58
TPM3-220ENST00000509601 MAP3K13O43283 966 aa18.68■□□□□ 0.58
TPM3-220ENST00000509601 THAP12O43422 761 aa18.68■□□□□ 0.58
TPM3-220ENST00000509601 ERCC5P28715 1186 aaPredicted RBP18.68■□□□□ 0.58
TPM3-220ENST00000509601 GNA15P30679 374 aa18.68■□□□□ 0.58
TPM3-220ENST00000509601 IL12RB1P42701 662 aa18.68■□□□□ 0.58
TPM3-220ENST00000509601 PTGER3P43115 390 aa18.68■□□□□ 0.58
TPM3-220ENST00000509601 ACADSBP45954 432 aa18.68■□□□□ 0.58
TPM3-220ENST00000509601 TBX4P57082 545 aa18.68■□□□□ 0.58
TPM3-220ENST00000509601 RING1Q06587 406 aa18.68■□□□□ 0.58
TPM3-220ENST00000509601 STPG1Q5TH74 334 aa18.68■□□□□ 0.58
TPM3-220ENST00000509601 SYPL2Q5VXT5 272 aa18.68■□□□□ 0.58
TPM3-220ENST00000509601 RNF43Q68DV7 783 aa18.68■□□□□ 0.58
TPM3-220ENST00000509601 LPCAT2Q7L5N7 544 aa18.68■□□□□ 0.58
TPM3-220ENST00000509601 KIAA0907Q7Z7F0 614 aaPredicted RBP18.68■□□□□ 0.58
TPM3-220ENST00000509601 DQX1Q8TE96 717 aaKnown RBP18.68■□□□□ 0.58
TPM3-220ENST00000509601 SLC39A13Q96H72 371 aa18.68■□□□□ 0.58
TPM3-220ENST00000509601 SPACA7Q96KW9 195 aa18.68■□□□□ 0.58
TPM3-220ENST00000509601 SLC6A17Q9H1V8 727 aa18.68■□□□□ 0.58
TPM3-220ENST00000509601 TMEM74BQ9NUR3 256 aa18.68■□□□□ 0.58
TPM3-220ENST00000509601 PLXND1Q9Y4D7 1925 aa18.67■□□□□ 0.58
TPM3-220ENST00000509601 PATE3B3GLJ2 98 aa18.67■□□□□ 0.58
TPM3-220ENST00000509601 MED7O43513 233 aa18.67■□□□□ 0.58
TPM3-220ENST00000509601 ACSL4O60488 711 aa18.67■□□□□ 0.58
TPM3-220ENST00000509601 NCAM1P13591 858 aa18.67■□□□□ 0.58
TPM3-220ENST00000509601 HLA-FP30511 346 aa18.67■□□□□ 0.58
TPM3-220ENST00000509601 SLC6A4P31645 630 aa18.67■□□□□ 0.58
TPM3-220ENST00000509601 SGSHP51688 502 aa18.67■□□□□ 0.58
TPM3-220ENST00000509601 MAN2A1Q16706 1144 aa18.67■□□□□ 0.58
TPM3-220ENST00000509601 TPD52L1Q16890 204 aaPredicted RBP18.67■□□□□ 0.58
TPM3-220ENST00000509601 FAM133BQ5BKY9 247 aaKnown RBP18.67■□□□□ 0.58
TPM3-220ENST00000509601 MIIPQ5JXC2 388 aa18.67■□□□□ 0.58
TPM3-220ENST00000509601 SPDYCQ5MJ68 293 aa18.67■□□□□ 0.58
TPM3-220ENST00000509601 PIK3R6Q5UE93 754 aa18.67■□□□□ 0.58
TPM3-220ENST00000509601 RFWD3Q6PCD5 774 aa18.67■□□□□ 0.58
TPM3-220ENST00000509601 BEND5Q7L4P6 421 aa18.67■□□□□ 0.58
TPM3-220ENST00000509601 ANKS1BQ7Z6G8 1248 aa18.67■□□□□ 0.58
TPM3-220ENST00000509601 UNC45BQ8IWX7 931 aa18.67■□□□□ 0.58
TPM3-220ENST00000509601 SORCS1Q8WY21 1168 aa18.67■□□□□ 0.58
TPM3-220ENST00000509601 PIGKQ92643 395 aa18.67■□□□□ 0.58
TPM3-220ENST00000509601 FCRL2Q96LA5 508 aaPredicted RBP18.67■□□□□ 0.58
TPM3-220ENST00000509601 MRGPRX1Q96LB2 322 aa18.67■□□□□ 0.58
TPM3-220ENST00000509601 NUP62CLQ9H1M0 184 aa18.67■□□□□ 0.58
TPM3-220ENST00000509601 TJP2Q9UDY2 1190 aa18.67■□□□□ 0.58
TPM3-220ENST00000509601 DNAJC12Q9UKB3 198 aa18.67■□□□□ 0.58
TPM3-220ENST00000509601 IGHV1OR15-9A0A0B4J2B8 117 aa18.66■□□□□ 0.58
TPM3-220ENST00000509601 E5RJQ4 531 aa18.66■□□□□ 0.58
TPM3-220ENST00000509601 FOXN3O00409 490 aaPredicted RBP18.66■□□□□ 0.58
TPM3-220ENST00000509601 NPC1O15118 1278 aa18.66■□□□□ 0.58
TPM3-220ENST00000509601 TIMM44O43615 452 aa18.66■□□□□ 0.58
TPM3-220ENST00000509601 CLCN1P35523 988 aa18.66■□□□□ 0.58
TPM3-220ENST00000509601 USP8P40818 1118 aa18.66■□□□□ 0.58
TPM3-220ENST00000509601 PI4KAP42356 2102 aa18.66■□□□□ 0.58
TPM3-220ENST00000509601 ZNF445P59923 1031 aa18.66■□□□□ 0.58
TPM3-220ENST00000509601 KCNMA1Q12791 1236 aa18.66■□□□□ 0.58
TPM3-220ENST00000509601 ZNF234Q14588 700 aa18.66■□□□□ 0.58
TPM3-220ENST00000509601 VWA3BQ502W6 1294 aa18.66■□□□□ 0.58
TPM3-220ENST00000509601 NUGGCQ68CJ6 796 aa18.66■□□□□ 0.58
TPM3-220ENST00000509601 SMYD5Q6GMV2 418 aa18.66■□□□□ 0.58
TPM3-220ENST00000509601 NADSYN1Q6IA69 706 aa18.66■□□□□ 0.58
TPM3-220ENST00000509601 CYP2U1Q7Z449 544 aa18.66■□□□□ 0.58
TPM3-220ENST00000509601 DEFB119Q8N690 84 aa18.66■□□□□ 0.58
TPM3-220ENST00000509601 UCMAQ8WVF2 138 aa18.66■□□□□ 0.58
TPM3-220ENST00000509601 GOLGA1Q92805 767 aa18.66■□□□□ 0.58
TPM3-220ENST00000509601 MYEOVQ96EZ4 313 aa18.66■□□□□ 0.58
TPM3-220ENST00000509601 IRX2Q9BZI1 471 aaPredicted RBP18.66■□□□□ 0.58
TPM3-220ENST00000509601 NDST4Q9H3R1 872 aa18.66■□□□□ 0.58
TPM3-220ENST00000509601 CD93Q9NPY3 652 aa18.66■□□□□ 0.58
TPM3-220ENST00000509601 SAMSN1Q9NSI8 373 aaKnown RBP18.66■□□□□ 0.58
TPM3-220ENST00000509601 KHNYNO15037 678 aaKnown RBP18.65■□□□□ 0.58
TPM3-220ENST00000509601 SART1O43290 800 aaKnown RBP18.65■□□□□ 0.58
TPM3-220ENST00000509601 ZNF217O75362 1048 aa18.65■□□□□ 0.58
TPM3-220ENST00000509601 ANP32AP39687 249 aaKnown RBP18.65■□□□□ 0.58
TPM3-220ENST00000509601 IRX4P78413 519 aa18.65■□□□□ 0.58
TPM3-220ENST00000509601 EIF4EBP2Q13542 120 aaPredicted RBP18.65■□□□□ 0.58
TPM3-220ENST00000509601 EIF4HQ15056 248 aaKnown RBP18.65■□□□□ 0.58
TPM3-220ENST00000509601 TAF5Q15542 800 aa18.65■□□□□ 0.58
TPM3-220ENST00000509601 FUT11Q495W5 492 aa18.65■□□□□ 0.58
TPM3-220ENST00000509601 HSP90AA4PQ58FG1 418 aa18.65■□□□□ 0.58
TPM3-220ENST00000509601 MPP7Q5T2T1 576 aa18.65■□□□□ 0.58
TPM3-220ENST00000509601 ARMCX6Q7L4S7 300 aa18.65■□□□□ 0.58
TPM3-220ENST00000509601 METTL3Q86U44 580 aaKnown RBP18.65■□□□□ 0.58
TPM3-220ENST00000509601 ADIPOR2Q86V24 386 aa18.65■□□□□ 0.58
TPM3-220ENST00000509601 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.65■□□□□ 0.58
TPM3-220ENST00000509601 ADAM32Q8TC27 787 aa18.65■□□□□ 0.58
TPM3-220ENST00000509601 WFDC5Q8TCV5 224 aa18.65■□□□□ 0.58
TPM3-220ENST00000509601 FAM149B1Q96BN6 582 aa18.65■□□□□ 0.58
TPM3-220ENST00000509601 LMLNQ96KR4 655 aa18.65■□□□□ 0.58
TPM3-220ENST00000509601 TUBGCP2Q9BSJ2 902 aa18.65■□□□□ 0.58
TPM3-220ENST00000509601 MKRN2Q9H000 416 aaKnown RBP18.65■□□□□ 0.58
TPM3-220ENST00000509601 PCDHGC3Q9UN70 934 aa18.65■□□□□ 0.58
TPM3-220ENST00000509601 CYP8B1Q9UNU6 501 aa18.65■□□□□ 0.58
TPM3-220ENST00000509601 TLR6Q9Y2C9 796 aa18.65■□□□□ 0.58
TPM3-220ENST00000509601 LNP1A1A4G5 178 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms