RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 CYBBP04839 570 aa16.79■□□□□ 0.28
PDLIM5-212ENST00000509333 CHRNB2P17787 502 aa16.79■□□□□ 0.28
PDLIM5-212ENST00000509333 SOX5P35711 763 aa16.79■□□□□ 0.28
PDLIM5-212ENST00000509333 GABRB2P47870 512 aa16.79■□□□□ 0.28
PDLIM5-212ENST00000509333 SNX16P57768 344 aa16.79■□□□□ 0.28
PDLIM5-212ENST00000509333 PITX1P78337 314 aaPredicted RBP16.79■□□□□ 0.28
PDLIM5-212ENST00000509333 NNTQ13423 1086 aa16.79■□□□□ 0.28
PDLIM5-212ENST00000509333 SIM2Q14190 667 aaPredicted RBP16.79■□□□□ 0.28
PDLIM5-212ENST00000509333 PTPN20Q4JDL3 420 aa16.79■□□□□ 0.28
PDLIM5-212ENST00000509333 FAM133BQ5BKY9 247 aaKnown RBP16.79■□□□□ 0.28
PDLIM5-212ENST00000509333 C10orf76Q5T2E6 689 aa16.79■□□□□ 0.28
PDLIM5-212ENST00000509333 PIK3R6Q5UE93 754 aa16.79■□□□□ 0.28
PDLIM5-212ENST00000509333 TAF3Q5VWG9 929 aa16.79■□□□□ 0.28
PDLIM5-212ENST00000509333 NUGGCQ68CJ6 796 aa16.79■□□□□ 0.28
PDLIM5-212ENST00000509333 DCLK2Q8N568 766 aa16.79■□□□□ 0.28
PDLIM5-212ENST00000509333 ADAM32Q8TC27 787 aa16.79■□□□□ 0.28
PDLIM5-212ENST00000509333 SLC2A13Q96QE2 648 aa16.79■□□□□ 0.28
PDLIM5-212ENST00000509333 TRIM62Q9BVG3 475 aa16.79■□□□□ 0.28
PDLIM5-212ENST00000509333 IRX2Q9BZI1 471 aaPredicted RBP16.79■□□□□ 0.28
PDLIM5-212ENST00000509333 PDCL3Q9H2J4 239 aa16.79■□□□□ 0.28
PDLIM5-212ENST00000509333 RTN4Q9NQC3 1192 aaKnown RBP16.79■□□□□ 0.28
PDLIM5-212ENST00000509333 GRAP2O75791 330 aa16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 MMEP08473 750 aa16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 SLC6A4P31645 630 aa16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 STAT1P42224 750 aa16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 SLC11A2P49281 568 aa16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 DGKEP52429 567 aa16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 ZNF445P59923 1031 aa16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 GEN1Q17RS7 908 aa16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 DCAF6Q58WW2 860 aa16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 ZC3H12AQ5D1E8 599 aaKnown RBP16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 EOGTQ5NDL2 527 aa16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 NADSYN1Q6IA69 706 aa16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 OLFML1Q6UWY5 402 aa16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 FAM183BPQ6ZVS7 135 aa16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 TAC4Q86UU9 113 aa16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 RASSF3Q86WH2 238 aa16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 ZNF513Q8N8E2 541 aaPredicted RBP16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 ZNF397Q8NF99 534 aaPredicted RBP16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 NEK11Q8NG66 645 aa16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 EPS8L1Q8TE68 723 aa16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 GAB3Q8WWW8 586 aa16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 RUBCNQ92622 972 aa16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 C18orf8Q96DM3 657 aa16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 SERPINB11Q96P15 392 aa16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 ACOX2Q99424 681 aa16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 NOCTQ9UK39 431 aaKnown RBP16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 CEP83Q9Y592 693 aa16.78■□□□□ 0.28
PDLIM5-212ENST00000509333 SYCE3A1L190 88 aa16.77■□□□□ 0.28
PDLIM5-212ENST00000509333 KCNU1A8MYU2 1149 aa16.77■□□□□ 0.28
PDLIM5-212ENST00000509333 TIMM44O43615 452 aa16.77■□□□□ 0.28
PDLIM5-212ENST00000509333 NTSR1P30989 418 aa16.77■□□□□ 0.28
PDLIM5-212ENST00000509333 CDK17Q00537 523 aa16.77■□□□□ 0.28
PDLIM5-212ENST00000509333 MPP7Q5T2T1 576 aa16.77■□□□□ 0.28
PDLIM5-212ENST00000509333 EGFLAMQ63HQ2 1017 aa16.77■□□□□ 0.28
PDLIM5-212ENST00000509333 RNF43Q68DV7 783 aa16.77■□□□□ 0.28
PDLIM5-212ENST00000509333 RFWD3Q6PCD5 774 aa16.77■□□□□ 0.28
PDLIM5-212ENST00000509333 SLC26A9Q7LBE3 791 aa16.77■□□□□ 0.28
PDLIM5-212ENST00000509333 KIAA0907Q7Z7F0 614 aaPredicted RBP16.77■□□□□ 0.28
PDLIM5-212ENST00000509333 ERICH1Q86X53 443 aa16.77■□□□□ 0.28
PDLIM5-212ENST00000509333 ZNF677Q86XU0 584 aa16.77■□□□□ 0.28
PDLIM5-212ENST00000509333 ZDHHC17Q8IUH5 632 aa16.77■□□□□ 0.28
PDLIM5-212ENST00000509333 TSTD1Q8NFU3 115 aa16.77■□□□□ 0.28
PDLIM5-212ENST00000509333 CPA5Q8WXQ8 436 aa16.77■□□□□ 0.28
PDLIM5-212ENST00000509333 PCMTD1Q96MG8 357 aaPredicted RBP16.77■□□□□ 0.28
PDLIM5-212ENST00000509333 NAP1L5Q96NT1 182 aaPredicted RBP16.77■□□□□ 0.28
PDLIM5-212ENST00000509333 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.77■□□□□ 0.28
PDLIM5-212ENST00000509333 SMG5Q9UPR3 1016 aaKnown RBP16.77■□□□□ 0.28
PDLIM5-212ENST00000509333 WASH3PC4AMC7 463 aa16.76■□□□□ 0.27
PDLIM5-212ENST00000509333 HSF2BPO75031 334 aa16.76■□□□□ 0.27
PDLIM5-212ENST00000509333 LSM8O95777 96 aaKnown RBP16.76■□□□□ 0.27
PDLIM5-212ENST00000509333 CYP1A1P04798 512 aaPredicted RBP16.76■□□□□ 0.27
PDLIM5-212ENST00000509333 TGM1P22735 817 aa16.76■□□□□ 0.27
PDLIM5-212ENST00000509333 HOXD9P28356 352 aaPredicted RBP16.76■□□□□ 0.27
PDLIM5-212ENST00000509333 NOS2P35228 1153 aa16.76■□□□□ 0.27
PDLIM5-212ENST00000509333 SGSHP51688 502 aa16.76■□□□□ 0.27
PDLIM5-212ENST00000509333 CDR2Q01850 454 aa16.76■□□□□ 0.27
PDLIM5-212ENST00000509333 NR1I3Q14994 352 aa16.76■□□□□ 0.27
PDLIM5-212ENST00000509333 TMEM215Q68D42 235 aa16.76■□□□□ 0.27
PDLIM5-212ENST00000509333 SLC20A1Q8WUM9 679 aa16.76■□□□□ 0.27
PDLIM5-212ENST00000509333 MYEOVQ96EZ4 313 aa16.76■□□□□ 0.27
PDLIM5-212ENST00000509333 SPAG5Q96R06 1193 aa16.76■□□□□ 0.27
PDLIM5-212ENST00000509333 PCDHB18PQ96TA0 734 aa16.76■□□□□ 0.27
PDLIM5-212ENST00000509333 SYNCQ9H7C4 482 aa16.76■□□□□ 0.27
PDLIM5-212ENST00000509333 CD248Q9HCU0 757 aa16.76■□□□□ 0.27
PDLIM5-212ENST00000509333 ELOVL2Q9NXB9 296 aa16.76■□□□□ 0.27
PDLIM5-212ENST00000509333 XPO7Q9UIA9 1087 aaKnown RBP16.76■□□□□ 0.27
PDLIM5-212ENST00000509333 ABCA7Q8IZY2 2146 aa16.75■□□□□ 0.27
PDLIM5-212ENST00000509333 A0A1W2PQF6 199 aa16.75■□□□□ 0.27
PDLIM5-212ENST00000509333 IRAK2O43187 625 aa16.75■□□□□ 0.27
PDLIM5-212ENST00000509333 RPP40O75818 363 aaKnown RBP16.75■□□□□ 0.27
PDLIM5-212ENST00000509333 PTMSP20962 102 aa16.75■□□□□ 0.27
PDLIM5-212ENST00000509333 HLA-FP30511 346 aa16.75■□□□□ 0.27
PDLIM5-212ENST00000509333 WASP42768 502 aa16.75■□□□□ 0.27
PDLIM5-212ENST00000509333 NOMO3P69849 1222 aa16.75■□□□□ 0.27
PDLIM5-212ENST00000509333 FMO1Q01740 532 aa16.75■□□□□ 0.27
PDLIM5-212ENST00000509333 LPAL2Q16609 132 aa16.75■□□□□ 0.27
PDLIM5-212ENST00000509333 MS4A13Q5J8X5 152 aa16.75■□□□□ 0.27
PDLIM5-212ENST00000509333 PRR23BQ6ZRT6 265 aa16.75■□□□□ 0.27
PDLIM5-212ENST00000509333 TRMT11Q7Z4G4 463 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms