RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 DDX31Q9H8H2 851 aaKnown RBP2.53□□□□□ -2.01
XRCC4-204ENST00000509268 ZIM2Q9NZV7 527 aa2.53□□□□□ -2.01
XRCC4-204ENST00000509268 SMAD5-AS1Q9Y6J3 95 aa2.53□□□□□ -2.01
XRCC4-204ENST00000509268 A0A087WWL8 130 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 IGKV3D-20A0A0C4DH25 116 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 EXOC5O00471 708 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 PHGDHO43175 533 aaKnown RBP2.52□□□□□ -2.01
XRCC4-204ENST00000509268 PLIN1O60240 522 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 BAG4O95429 457 aaKnown RBP2.52□□□□□ -2.01
XRCC4-204ENST00000509268 KRT18P05783 430 aaKnown RBP2.52□□□□□ -2.01
XRCC4-204ENST00000509268 F7P08709 466 aaPredicted RBP2.52□□□□□ -2.01
XRCC4-204ENST00000509268 CHRNB1P11230 501 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 FCGR1AP12314 374 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 KRT5P13647 590 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 ATF3P18847 181 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 IARSP41252 1262 aaKnown RBP2.52□□□□□ -2.01
XRCC4-204ENST00000509268 GUCY2FP51841 1108 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 NEK2P51955 445 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 TRAF2Q12933 501 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 MTMR1Q13613 665 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 ST3GAL2Q16842 350 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 EFCAB2Q5VUJ9 269 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 ISM2Q6H9L7 571 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 PLEKHA7Q6IQ23 1121 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 MYO1HQ8N1T3 1032 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 MIER2Q8N344 545 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 PRR18Q8N4B5 295 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 DNAJC5GQ8N7S2 189 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 ATL2Q8NHH9 583 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 DNAJB14Q8TBM8 379 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 RTP4Q96DX8 246 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 VPS50Q96JG6 964 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 ARPC5LQ9BPX5 153 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 ELOVL1Q9BW60 279 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 CINPQ9BW66 212 aaPredicted RBP2.52□□□□□ -2.01
XRCC4-204ENST00000509268 RTFDC1Q9BY42 306 aaPredicted RBP2.52□□□□□ -2.01
XRCC4-204ENST00000509268 ISCUQ9H1K1 167 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 IGSF9Q9P2J2 1179 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 DNAJB11Q9UBS4 358 aa2.52□□□□□ -2.01
XRCC4-204ENST00000509268 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.52□□□□□ -2.01
XRCC4-204ENST00000509268 GAGE12JA6NER3 117 aa2.51□□□□□ -2.01
XRCC4-204ENST00000509268 BMPR1BO00238 502 aa2.51□□□□□ -2.01
XRCC4-204ENST00000509268 IFRD1O00458 451 aaPredicted RBP2.51□□□□□ -2.01
XRCC4-204ENST00000509268 MDM4O15151 490 aa2.51□□□□□ -2.01
XRCC4-204ENST00000509268 PRPF3O43395 683 aaKnown RBP2.51□□□□□ -2.01
XRCC4-204ENST00000509268 PAK4O96013 591 aaPredicted RBP2.51□□□□□ -2.01
XRCC4-204ENST00000509268 MYL1P05976 194 aa2.51□□□□□ -2.01
XRCC4-204ENST00000509268 ST6GAL1P15907 406 aa2.51□□□□□ -2.01
XRCC4-204ENST00000509268 PDCP20941 246 aa2.51□□□□□ -2.01
XRCC4-204ENST00000509268 CRIP2P52943 208 aaPredicted RBP2.51□□□□□ -2.01
XRCC4-204ENST00000509268 DEUP1Q05D60 604 aa2.51□□□□□ -2.01
XRCC4-204ENST00000509268 HDAC1Q13547 482 aaPredicted RBP2.51□□□□□ -2.01
XRCC4-204ENST00000509268 LMBRD2Q68DH5 695 aaPredicted RBP2.51□□□□□ -2.01
XRCC4-204ENST00000509268 PARM1Q6UWI2 310 aa2.51□□□□□ -2.01
XRCC4-204ENST00000509268 CLEC4GQ6UXB4 293 aa2.51□□□□□ -2.01
XRCC4-204ENST00000509268 H1FNTQ75WM6 255 aaPredicted RBP2.51□□□□□ -2.01
XRCC4-204ENST00000509268 CHPFQ8IZ52 775 aa2.51□□□□□ -2.01
XRCC4-204ENST00000509268 SLC15A4Q8N697 577 aa2.51□□□□□ -2.01
XRCC4-204ENST00000509268 ZNF485Q8NCK3 441 aa2.51□□□□□ -2.01
XRCC4-204ENST00000509268 C7orf57Q8NEG2 295 aa2.51□□□□□ -2.01
XRCC4-204ENST00000509268 SMAD5Q99717 465 aaKnown RBP2.51□□□□□ -2.01
XRCC4-204ENST00000509268 ZNF700Q9H0M5 742 aa2.51□□□□□ -2.01
XRCC4-204ENST00000509268 CCDC8Q9H0W5 538 aaPredicted RBP2.51□□□□□ -2.01
XRCC4-204ENST00000509268 CDH19Q9H159 772 aa2.51□□□□□ -2.01
XRCC4-204ENST00000509268 PLAC1Q9HBJ0 212 aa2.51□□□□□ -2.01
XRCC4-204ENST00000509268 XPNPEP3Q9NQH7 507 aa2.51□□□□□ -2.01
XRCC4-204ENST00000509268 PLEKHB1Q9UF11 243 aaPredicted RBP2.51□□□□□ -2.01
XRCC4-204ENST00000509268 ASAP1Q9ULH1 1129 aa2.51□□□□□ -2.01
XRCC4-204ENST00000509268 PCDHA6Q9UN73 950 aa2.51□□□□□ -2.01
XRCC4-204ENST00000509268 HEMK1Q9Y5R4 338 aaPredicted RBP2.51□□□□□ -2.01
XRCC4-204ENST00000509268 PLSCR5A0PG75 271 aa2.5□□□□□ -2.01
XRCC4-204ENST00000509268 A6NNC1 897 aa2.5□□□□□ -2.01
XRCC4-204ENST00000509268 SPRY3O43610 288 aa2.5□□□□□ -2.01
XRCC4-204ENST00000509268 WDHD1O75717 1129 aaPredicted RBP2.5□□□□□ -2.01
XRCC4-204ENST00000509268 ZBTB11O95625 1053 aaPredicted RBP2.5□□□□□ -2.01
XRCC4-204ENST00000509268 TBX6O95947 436 aaPredicted RBP2.5□□□□□ -2.01
XRCC4-204ENST00000509268 MT-CO1P00395 513 aa2.5□□□□□ -2.01
XRCC4-204ENST00000509268 SNRNP70P08621 437 aaKnown RBP2.5□□□□□ -2.01
XRCC4-204ENST00000509268 ERVK11-1P61568 191 aa2.5□□□□□ -2.01
XRCC4-204ENST00000509268 WDR5P61964 334 aaKnown RBP2.5□□□□□ -2.01
XRCC4-204ENST00000509268 CCDC15Q0P6D6 951 aa2.5□□□□□ -2.01
XRCC4-204ENST00000509268 FOXD4Q12950 439 aaPredicted RBP2.5□□□□□ -2.01
XRCC4-204ENST00000509268 OS9Q13438 667 aaPredicted RBP2.5□□□□□ -2.01
XRCC4-204ENST00000509268 PIN1Q13526 163 aaPredicted RBP2.5□□□□□ -2.01
XRCC4-204ENST00000509268 KIF19Q2TAC6 998 aa2.5□□□□□ -2.01
XRCC4-204ENST00000509268 C10orf62Q5T681 223 aaPredicted RBP2.5□□□□□ -2.01
XRCC4-204ENST00000509268 PPP4R4Q6NUP7 873 aa2.5□□□□□ -2.01
XRCC4-204ENST00000509268 KSR2Q6VAB6 950 aa2.5□□□□□ -2.01
XRCC4-204ENST00000509268 CREB3L2Q70SY1 520 aa2.5□□□□□ -2.01
XRCC4-204ENST00000509268 SVIPQ8NHG7 77 aa2.5□□□□□ -2.01
XRCC4-204ENST00000509268 KAT2BQ92831 832 aa2.5□□□□□ -2.01
XRCC4-204ENST00000509268 HOOK2Q96ED9 719 aa2.5□□□□□ -2.01
XRCC4-204ENST00000509268 MTMR8Q96EF0 704 aa2.5□□□□□ -2.01
XRCC4-204ENST00000509268 SLC35A4Q96G79 324 aa2.5□□□□□ -2.01
XRCC4-204ENST00000509268 URB1-AS1Q96HZ7 61 aa2.5□□□□□ -2.01
XRCC4-204ENST00000509268 PCGF6Q9BYE7 350 aa2.5□□□□□ -2.01
XRCC4-204ENST00000509268 MS4A7Q9GZW8 240 aaPredicted RBP2.5□□□□□ -2.01
XRCC4-204ENST00000509268 SDF2L1Q9HCN8 221 aa2.5□□□□□ -2.01
XRCC4-204ENST00000509268 CNNM1Q9NRU3 951 aa2.5□□□□□ -2.01
XRCC4-204ENST00000509268 IPO11Q9UI26 975 aaKnown RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms