RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 PENKP01210 267 aaPredicted RBP11.41□□□□□ -0.58
RNF4-212ENST00000509258 VDRP11473 427 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 LCP1P13796 627 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 SGSHP51688 502 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 SLC8A3P57103 927 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 ZNF33AQ06730 810 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 BST2Q10589 180 aaKnown RBP11.41□□□□□ -0.58
RNF4-212ENST00000509258 KCNH2Q12809 1159 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 PAK1Q13153 545 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 GEN1Q17RS7 908 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 LCLAT1Q6UWP7 414 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 DENND1CQ8IV53 801 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 ARHGAP18Q8N392 663 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 PPM1KQ8N3J5 372 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 RBBP8NLQ8NC74 664 aaPredicted RBP11.41□□□□□ -0.58
RNF4-212ENST00000509258 SLC35F5Q8WV83 523 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 UCMAQ8WVF2 138 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 ZCCHC14Q8WYQ9 949 aaKnown RBP11.41□□□□□ -0.58
RNF4-212ENST00000509258 NT5C1BQ96P26 610 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 GABRG3Q99928 467 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 CAPN10Q9HC96 672 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 METTL14Q9HCE5 456 aaKnown RBP11.41□□□□□ -0.58
RNF4-212ENST00000509258 CACNA2D2Q9NY47 1150 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 MARCH2Q9P0N8 246 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 CYTH4Q9UIA0 394 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.41□□□□□ -0.586e-6■■■■■ 55.1
RNF4-212ENST00000509258 PCDHB4Q9Y5E5 795 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 WDFY3Q8IZQ1 3526 aa11.41□□□□□ -0.58
RNF4-212ENST00000509258 SPAARA0A1B0GVQ0 90 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 H0Y626 953 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 GFRA2O00451 464 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 NPC1O15118 1278 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 HYAL3O43820 417 aaPredicted RBP11.4□□□□□ -0.58
RNF4-212ENST00000509258 TRIM16O95361 564 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 FYNP06241 537 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 NDUFV2P19404 249 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 CHKAP35790 457 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 DGKGP49619 791 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 MFAP3P55082 362 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 MARSP56192 900 aaKnown RBP11.4□□□□□ -0.58
RNF4-212ENST00000509258 DAOAP59103 153 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 COG7P83436 770 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 STIM1Q13586 685 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 HNRNPDQ14103 355 aaKnown RBP11.4□□□□□ -0.58
RNF4-212ENST00000509258 BSPRYQ5W0U4 402 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 TMEM215Q68D42 235 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 FOXR2Q6PJQ5 311 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 FMNL3Q8IVF7 1028 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 FAM217AQ8IXS0 508 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 MINDY1Q8N5J2 469 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 DEFB119Q8N690 84 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 EHBP1Q8NDI1 1231 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 IPO4Q8TEX9 1081 aaKnown RBP11.4□□□□□ -0.58
RNF4-212ENST00000509258 SORCS1Q8WY21 1168 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 MYEOVQ96EZ4 313 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 PIWIL1Q96J94 861 aaKnown RBP11.4□□□□□ -0.58
RNF4-212ENST00000509258 HSPA12BQ96MM6 686 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 DCLK3Q9C098 648 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 INTS2Q9H0H0 1204 aaKnown RBP11.4□□□□□ -0.58
RNF4-212ENST00000509258 FAM124BQ9H5Z6 455 aaPredicted RBP11.4□□□□□ -0.58
RNF4-212ENST00000509258 TJP2Q9UDY2 1190 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 SUSD2Q9UGT4 822 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 HOOK1Q9UJC3 728 aaKnown RBP11.4□□□□□ -0.58
RNF4-212ENST00000509258 RALYQ9UKM9 306 aaKnown RBP11.4□□□□□ -0.58
RNF4-212ENST00000509258 CYP8B1Q9UNU6 501 aa11.4□□□□□ -0.58
RNF4-212ENST00000509258 AKAP13Q12802 2813 aa11.39□□□□□ -0.59
RNF4-212ENST00000509258 BECN2A8MW95 431 aa11.39□□□□□ -0.59
RNF4-212ENST00000509258 M0QYV0 167 aa11.39□□□□□ -0.59
RNF4-212ENST00000509258 ARHGAP33O14559 1287 aa11.39□□□□□ -0.59
RNF4-212ENST00000509258 NDUFS2O75306 463 aa11.39□□□□□ -0.59
RNF4-212ENST00000509258 CYBBP04839 570 aa11.39□□□□□ -0.59
RNF4-212ENST00000509258 SYPP08247 313 aa11.39□□□□□ -0.59
RNF4-212ENST00000509258 PAEPP09466 180 aa11.39□□□□□ -0.59
RNF4-212ENST00000509258 TBXAS1P24557 533 aaPredicted RBP11.39□□□□□ -0.59
RNF4-212ENST00000509258 STARD3Q14849 445 aa11.39□□□□□ -0.59
RNF4-212ENST00000509258 TRIP4Q15650 581 aaPredicted RBP11.39□□□□□ -0.59
RNF4-212ENST00000509258 SYCP2LQ5T4T6 812 aa11.39□□□□□ -0.59
RNF4-212ENST00000509258 DENND1BQ6P3S1 775 aa11.39□□□□□ -0.59
RNF4-212ENST00000509258 RSRC2Q7L4I2 434 aaKnown RBP11.39□□□□□ -0.59
RNF4-212ENST00000509258 SLC41A1Q8IVJ1 513 aa11.39□□□□□ -0.59
RNF4-212ENST00000509258 TRIML1Q8N9V2 468 aa11.39□□□□□ -0.59
RNF4-212ENST00000509258 WFDC5Q8TCV5 224 aa11.39□□□□□ -0.59
RNF4-212ENST00000509258 KCTD13Q8WZ19 329 aa11.39□□□□□ -0.59
RNF4-212ENST00000509258 FOXJ1Q92949 421 aa11.39□□□□□ -0.59
RNF4-212ENST00000509258 MRGPRX1Q96LB2 322 aa11.39□□□□□ -0.59
RNF4-212ENST00000509258 CRACR2AQ9BSW2 395 aa11.39□□□□□ -0.59
RNF4-212ENST00000509258 LRRC4Q9HBW1 653 aa11.39□□□□□ -0.59
RNF4-212ENST00000509258 FSCN3Q9NQT6 498 aa11.39□□□□□ -0.59
RNF4-212ENST00000509258 DNAAF2Q9NVR5 837 aaKnown RBP11.39□□□□□ -0.59
RNF4-212ENST00000509258 KIAA1468Q9P260 1216 aa11.39□□□□□ -0.59
RNF4-212ENST00000509258 STRIP2Q9ULQ0 834 aa11.39□□□□□ -0.59
RNF4-212ENST00000509258 CNTN6Q9UQ52 1028 aa11.39□□□□□ -0.59
RNF4-212ENST00000509258 MSRB2Q9Y3D2 182 aa11.39□□□□□ -0.59
RNF4-212ENST00000509258 GOLGA6L7A0A1B0GV03 622 aa11.38□□□□□ -0.59
RNF4-212ENST00000509258 BICDL2A1A5D9 508 aa11.38□□□□□ -0.59
RNF4-212ENST00000509258 TSPAN3O60637 253 aa11.38□□□□□ -0.59
RNF4-212ENST00000509258 IGLV3-27P01718 113 aa11.38□□□□□ -0.59
RNF4-212ENST00000509258 AFPP02771 609 aaKnown RBP11.38□□□□□ -0.59
RNF4-212ENST00000509258 SETSIPP0DME0 302 aa11.38□□□□□ -0.59
RNF4-212ENST00000509258 GNSP15586 552 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms