RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 SLC18A2Q05940 514 aa11.4□□□□□ -0.59
SH3RF1-203ENST00000508685 PTK7Q13308 1070 aa11.4□□□□□ -0.59
SH3RF1-203ENST00000508685 DPYSL3Q14195 570 aa11.4□□□□□ -0.59
SH3RF1-203ENST00000508685 KRT72Q14CN4 511 aa11.4□□□□□ -0.59
SH3RF1-203ENST00000508685 ZRSR2Q15696 482 aaKnown RBP11.4□□□□□ -0.59
SH3RF1-203ENST00000508685 TRIM71Q2Q1W2 868 aaKnown RBP11.4□□□□□ -0.59
SH3RF1-203ENST00000508685 TAF1BQ53T94 588 aaPredicted RBP11.4□□□□□ -0.59
SH3RF1-203ENST00000508685 MDH1BQ5I0G3 518 aa11.4□□□□□ -0.59
SH3RF1-203ENST00000508685 PAQR9Q6ZVX9 377 aa11.4□□□□□ -0.59
SH3RF1-203ENST00000508685 ANKMY2Q8IV38 441 aa11.4□□□□□ -0.59
SH3RF1-203ENST00000508685 FAM13CQ8NE31 585 aa11.4□□□□□ -0.59
SH3RF1-203ENST00000508685 TCP10LQ8TDR4 215 aa11.4□□□□□ -0.59
SH3RF1-203ENST00000508685 NDRG1Q92597 394 aaKnown RBP11.4□□□□□ -0.59
SH3RF1-203ENST00000508685 TRPV6Q9H1D0 765 aa11.4□□□□□ -0.59
SH3RF1-203ENST00000508685 GPATCH2LQ9NWQ4 482 aa11.4□□□□□ -0.59
SH3RF1-203ENST00000508685 DDX43Q9NXZ2 648 aaKnown RBP11.4□□□□□ -0.59
SH3RF1-203ENST00000508685 GIT1Q9Y2X7 761 aa11.4□□□□□ -0.59
SH3RF1-203ENST00000508685 A0A0U1RQF3 1178 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 CFAP69A5D8W1 941 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 TRDMT1O14717 391 aaKnown RBP11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 CHADO15335 359 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 LPXNO60711 386 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 DHRS4L1P0CG22 281 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 PTPN1P18031 435 aaKnown RBP11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 SSTR1P30872 391 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 ARFIP2P53365 341 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 RABGGTBP53611 331 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 GDF10P55107 478 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 CDH6P55285 790 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 HDAC4P56524 1084 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 CDK18Q07002 472 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 TAF11Q15544 211 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 UPP1Q16831 310 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 TSNAXIP1Q2TAA8 658 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 HP1BP3Q5SSJ5 553 aaPredicted RBP11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 FNBP1LQ5T0N5 605 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 FAM91A1Q658Y4 838 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 CLNKQ7Z7G1 428 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 MRPL10Q7Z7H8 261 aaKnown RBP11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 PIGZQ86VD9 579 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 RFX6Q8HWS3 928 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 MAP7D3Q8IWC1 876 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 LMNTD2Q8IXW0 634 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 ARHGAP24Q8N264 748 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 HASPINQ8TF76 798 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 NAF1Q96HR8 494 aaKnown RBP11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 APOPT1Q96IL0 206 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 NSL1Q96IY1 281 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 NUDCD1Q96RS6 583 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 TSSK1BQ9BXA7 367 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 MMADHCQ9H3L0 296 aaPredicted RBP11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 CRTAC1Q9NQ79 661 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 CORO1CQ9ULV4 474 aaPredicted RBP11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 INPP5FQ9Y2H2 1132 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 PTCH2Q9Y6C5 1203 aa11.39□□□□□ -0.59
SH3RF1-203ENST00000508685 F8W810 466 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 DPYSL4O14531 572 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 PEX11AO75192 247 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 HAUS5O94927 633 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 INHAP05111 366 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 RPLP2P05387 115 aaKnown RBP11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 INHBAP08476 426 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 TPBGLP0DKB5 382 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 ADRA1DP25100 572 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 RPL34P49207 117 aaKnown RBP11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 ADIGQ0VDE8 80 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 BLMHQ13867 455 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 DSC3Q14574 896 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 CA9Q16790 459 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 BBS9Q3SYG4 887 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 FAM182AQ5T1J6 154 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 NPNTQ6UXI9 565 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 CLEC20AQ6ZU45 233 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 SLC26A9Q7LBE3 791 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 ZDHHC17Q8IUH5 632 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 ZNF276Q8N554 614 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 SLC44A1Q8WWI5 657 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 SPOCK2Q92563 424 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 GLT1D1Q96MS3 346 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 ZNF570Q96NI8 536 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 HNRNPABQ99729 332 aaKnown RBP11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 BTBD10Q9BSF8 475 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 NPHS2Q9NP85 383 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 TMEM30AQ9NV96 361 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 PAK5Q9P286 719 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 STOML1Q9UBI4 398 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 ZNF180Q9UJW8 692 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 CCDC85CA6NKD9 419 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 GOLGA8MH3BSY2 632 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 XPO1O14980 1071 aaKnown RBP11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 ZNF623O75123 536 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 ENDOD1O94919 500 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 RBP3P10745 1247 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 CKBP12277 381 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 NPR3P17342 541 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 NDUFV1P49821 464 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 NRLP54845 237 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 ROR1Q01973 937 aa11.38□□□□□ -0.59
SH3RF1-203ENST00000508685 MBTPS1Q14703 1052 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms