RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 NR0B2Q15466 257 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 SNRNP35Q16560 246 aaKnown RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 KYNUQ16719 465 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 ITPRIPL2Q3MIP1 535 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 VARS2Q5ST30 1063 aaKnown RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 WSCD1Q658N2 575 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 ALKBH2Q6NS38 261 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 DARS2Q6PI48 645 aaKnown RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 ABHD15Q6UXT9 468 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 WDR49Q8IV35 697 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 IGSF22Q8N9C0 903 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 MLKLQ8NB16 471 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 RHBDD1Q8TEB9 315 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 ARHGEF2Q92974 986 aaKnown RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 CASD1Q96PB1 797 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 ACO2Q99798 780 aaKnown RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 FOXP3Q9BZS1 431 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 DNAI1Q9UI46 699 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 CDH9Q9ULB4 789 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 UBA6A0AVT1 1052 aaPredicted RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 CPED1A4D0V7 1026 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 CCDC151A5D8V7 595 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 HEPACAM2A8MVW5 462 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 SOAT2O75908 522 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 ANP32DO95626 131 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 RHOP08100 348 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 JMJD7P0C870 316 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 CYP2A6P11509 494 aaPredicted RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 AMD1P17707 334 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 MUTP22033 750 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 CCNE1P24864 410 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 BRCC3P46736 316 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 GCLMP48507 274 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 RWDD2BP57060 319 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 SNRPFP62306 86 aaKnown RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 JAG1P78504 1218 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 CAP1Q01518 475 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 UGCGQ16739 394 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 ZC2HC1CQ53FD0 456 aaPredicted RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 DCAF6Q58WW2 860 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 ZC3H12AQ5D1E8 599 aaKnown RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 MANEAQ5SRI9 462 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 ARL6IP4Q66PJ3 421 aaKnown RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 ANKRD40Q6AI12 368 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 ANO7Q6IWH7 933 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 LGI2Q8N0V4 545 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 DAGLBQ8NCG7 672 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 GRIN3AQ8TCU5 1115 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 CFHR5Q9BXR6 569 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 NDEL1Q9GZM8 345 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 SMG9Q9H0W8 520 aaKnown RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 GIMAP4Q9NUV9 329 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 DNAAF2Q9NVR5 837 aaKnown RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 CALCOCO1Q9P1Z2 691 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 ZNHIT2Q9UHR6 403 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 ZNF214Q9UL59 606 aaPredicted RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 PSMD12O00232 456 aaPredicted RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 MAPK13O15264 365 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 SUN1O94901 812 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 ZNF202O95125 648 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 ZBED1O96006 694 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 TNFP01375 233 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 TUBBP07437 444 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 PLA2G4AP47712 749 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 AARSP49588 968 aaKnown RBP eCLIP3.05□□□□□ -1.925e-7■■■■■ 27.5
NEDD4-208ENST00000508342 MAPK10P53779 464 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 OCRLQ01968 901 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 C1QBPQ07021 282 aaKnown RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 TUSC3Q13454 348 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 LONRF2Q1L5Z9 754 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 CCDC38Q502W7 563 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 ZC3H12BQ5HYM0 836 aaKnown RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 SPOPLQ6IQ16 392 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 WHAMMQ8TF30 809 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 SPIRE2Q8WWL2 714 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 IQCDQ96DY2 449 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 NELL2Q99435 816 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 MYOCQ99972 504 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 CNPPD1Q9BV87 410 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 TM6SF1Q9BZW5 370 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 OSBPL3Q9H4L5 887 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 DNAJC18Q9H819 358 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 ZDHHC4Q9NPG8 344 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 MAFFQ9ULX9 164 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 LRRC37A2A6NM11 1700 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 SIP14410 1827 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 TGM5O43548 720 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 GPR32O75388 356 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 LUC7L3O95232 432 aaKnown RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 SKP1P63208 163 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 SPEM2Q0P670 501 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 XKR4Q5GH76 650 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 ZNF658Q5TYW1 1059 aaPredicted RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 C9orf57Q5W0N0 161 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 PKN3Q6P5Z2 889 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 C16orf62Q7Z3J2 963 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 KRT78Q8N1N4 520 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 BBOF1Q8ND07 529 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 BPIFB1Q8TDL5 484 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms