RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 BAG5Q9UL15 447 aa7.49□□□□□ -1.21
COL6A4P1-204ENST00000508169 RAB21Q9UL25 225 aa7.49□□□□□ -1.21
COL6A4P1-204ENST00000508169 TRPC5Q9UL62 973 aaPredicted RBP7.49□□□□□ -1.21
COL6A4P1-204ENST00000508169 KIF21AQ7Z4S6 1674 aa7.48□□□□□ -1.21
COL6A4P1-204ENST00000508169 TISP43B9A030 160 aa7.48□□□□□ -1.21
COL6A4P1-204ENST00000508169 NPIPB8E9PQR5 432 aa7.48□□□□□ -1.21
COL6A4P1-204ENST00000508169 PDE8BO95263 885 aa7.48□□□□□ -1.21
COL6A4P1-204ENST00000508169 ADRB1P08588 477 aa7.48□□□□□ -1.21
COL6A4P1-204ENST00000508169 CYP21A2P08686 494 aa7.48□□□□□ -1.21
COL6A4P1-204ENST00000508169 FAM163BP0C2L3 166 aa7.48□□□□□ -1.21
COL6A4P1-204ENST00000508169 FPR3P25089 353 aa7.48□□□□□ -1.21
COL6A4P1-204ENST00000508169 GRK5P34947 590 aa7.48□□□□□ -1.21
COL6A4P1-204ENST00000508169 CCT8P50990 548 aa7.48□□□□□ -1.21
COL6A4P1-204ENST00000508169 AARS2Q5JTZ9 985 aaKnown RBP7.48□□□□□ -1.21
COL6A4P1-204ENST00000508169 PCID2Q5JVF3 399 aa7.48□□□□□ -1.21
COL6A4P1-204ENST00000508169 KIRREL2Q6UWL6 708 aa7.48□□□□□ -1.21
COL6A4P1-204ENST00000508169 ESX1Q8N693 406 aa7.48□□□□□ -1.21
COL6A4P1-204ENST00000508169 OR52L2PQ8NGH6 319 aa7.48□□□□□ -1.21
COL6A4P1-204ENST00000508169 SLC9A6Q92581 669 aa7.48□□□□□ -1.21
COL6A4P1-204ENST00000508169 MPP4Q96JB8 637 aa7.48□□□□□ -1.21
COL6A4P1-204ENST00000508169 TWNKQ96RR1 684 aa7.48□□□□□ -1.21
COL6A4P1-204ENST00000508169 THAP7Q9BT49 309 aaPredicted RBP7.48□□□□□ -1.21
COL6A4P1-204ENST00000508169 SLC13A4Q9UKG4 626 aa7.48□□□□□ -1.21
COL6A4P1-204ENST00000508169 PNMA2Q9UL42 364 aa7.48□□□□□ -1.21
COL6A4P1-204ENST00000508169 VPS4AQ9UN37 437 aa7.48□□□□□ -1.21
COL6A4P1-204ENST00000508169 ST3GAL5Q9UNP4 418 aa7.48□□□□□ -1.21
COL6A4P1-204ENST00000508169 TBC1D3DA0A087WVF3 549 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 TBC1D3IA0A087WXS9 549 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 TBC1D3EA0A087X179 549 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 TBC1D3KA0A087X1G2 549 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 TBC1D3BA6NDS4 549 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 TBC1D3FA6NER0 549 aaPredicted RBP7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 MBD3L5A6NJ08 208 aaPredicted RBP7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 TBC1D3LB9A6J9 549 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 GCOM1H8Y6P7 765 aaPredicted RBP7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 HOXC11O43248 304 aaPredicted RBP7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 PRAMEF2O60811 474 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 ELFN1P0C7U0 828 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 TBC1D3HP0C7X1 549 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 XBP1P17861 261 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 MATN1P21941 496 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 RPL15P61313 204 aaKnown RBP7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 GPC5P78333 572 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 RAE1P78406 368 aaKnown RBP7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 TRPC3Q13507 836 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 ANKRD1Q15327 319 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 MAP3K21Q5TCX8 1036 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 IGFL4Q6B9Z1 124 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 TBC1D3GQ6DHY5 549 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 LAIR1Q6GTX8 287 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 TBC1D3CQ6IPX1 549 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 ZNF804AQ7Z570 1209 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 TBC1D3Q8IZP1 549 aaPredicted RBP7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 C12orf76Q8N812 135 aaPredicted RBP7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 GLMPQ8WWB7 406 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 PDLIM2Q96JY6 352 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 FOXJ2Q9P0K8 574 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 PI4KBQ9UBF8 816 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 TARBP1Q13395 1621 aaKnown RBP7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 RAD54L2Q9Y4B4 1467 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 SALL3Q9BXA9 1300 aa7.47□□□□□ -1.21
COL6A4P1-204ENST00000508169 EPB41L2O43491 1005 aaKnown RBP7.46□□□□□ -1.22
COL6A4P1-204ENST00000508169 HEXIM1O94992 359 aaKnown RBP7.46□□□□□ -1.22
COL6A4P1-204ENST00000508169 CNPP09543 421 aaKnown RBP7.46□□□□□ -1.22
COL6A4P1-204ENST00000508169 MCM7P33993 719 aa7.46□□□□□ -1.22
COL6A4P1-204ENST00000508169 GALNSP34059 522 aa7.46□□□□□ -1.22
COL6A4P1-204ENST00000508169 JAK3P52333 1124 aa7.46□□□□□ -1.22
COL6A4P1-204ENST00000508169 TLE3Q04726 772 aa7.46□□□□□ -1.22
COL6A4P1-204ENST00000508169 CTXN3Q4LDR2 81 aa7.46□□□□□ -1.22
COL6A4P1-204ENST00000508169 RNASE12Q5GAN4 147 aaKnown RBP7.46□□□□□ -1.22
COL6A4P1-204ENST00000508169 HECTD2Q5U5R9 776 aa7.46□□□□□ -1.22
COL6A4P1-204ENST00000508169 WDR93Q6P2C0 686 aa7.46□□□□□ -1.22
COL6A4P1-204ENST00000508169 SYNE3Q6ZMZ3 975 aa7.46□□□□□ -1.22
COL6A4P1-204ENST00000508169 RASGRP2Q7LDG7 609 aa7.46□□□□□ -1.22
COL6A4P1-204ENST00000508169 FSIP1Q8NA03 581 aa7.46□□□□□ -1.22
COL6A4P1-204ENST00000508169 SLC2A12Q8TD20 617 aa7.46□□□□□ -1.22
COL6A4P1-204ENST00000508169 KTI12Q96EK9 354 aaPredicted RBP7.46□□□□□ -1.22
COL6A4P1-204ENST00000508169 EDC3Q96F86 508 aaKnown RBP7.46□□□□□ -1.22
COL6A4P1-204ENST00000508169 SNX18Q96RF0 628 aa7.46□□□□□ -1.22
COL6A4P1-204ENST00000508169 MMS19Q96T76 1030 aa7.46□□□□□ -1.22
COL6A4P1-204ENST00000508169 SEC62Q99442 399 aaKnown RBP7.46□□□□□ -1.22
COL6A4P1-204ENST00000508169 CDCP1Q9H5V8 836 aa7.46□□□□□ -1.22
COL6A4P1-204ENST00000508169 SLC12A4Q9UP95 1085 aa7.46□□□□□ -1.22
COL6A4P1-204ENST00000508169 DNAJC16Q9Y2G8 782 aa7.46□□□□□ -1.22
COL6A4P1-204ENST00000508169 PCDHA10Q9Y5I2 948 aa7.46□□□□□ -1.22
COL6A4P1-204ENST00000508169 IFT140Q96RY7 1462 aa7.46□□□□□ -1.22
COL6A4P1-204ENST00000508169 CUL7Q14999 1698 aa7.45□□□□□ -1.22
COL6A4P1-204ENST00000508169 GAPVD1Q14C86 1478 aa7.45□□□□□ -1.22
COL6A4P1-204ENST00000508169 AGAP5A6NIR3 686 aa7.45□□□□□ -1.22
COL6A4P1-204ENST00000508169 PRRT4C9JH25 899 aa7.45□□□□□ -1.22
COL6A4P1-204ENST00000508169 STX16-NPEPL1H3BU86 382 aa7.45□□□□□ -1.22
COL6A4P1-204ENST00000508169 J3KRW8 73 aa7.45□□□□□ -1.22
COL6A4P1-204ENST00000508169 STX16O14662 325 aa7.45□□□□□ -1.22
COL6A4P1-204ENST00000508169 SEPT4O43236 478 aa7.45□□□□□ -1.22
COL6A4P1-204ENST00000508169 MBPP02686 304 aaPredicted RBP7.45□□□□□ -1.22
COL6A4P1-204ENST00000508169 DRD4P21917 467 aa7.45□□□□□ -1.22
COL6A4P1-204ENST00000508169 DUSP1P28562 367 aa7.45□□□□□ -1.22
COL6A4P1-204ENST00000508169 DDIT3P35638 169 aa7.45□□□□□ -1.22
COL6A4P1-204ENST00000508169 CCR5P51681 352 aa7.45□□□□□ -1.22
COL6A4P1-204ENST00000508169 TAS2R50P59544 299 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms