RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 KIF19Q2TAC6 998 aa18.83■□□□□ 0.6
CLDND1-217ENST00000508071 PPP1R26Q5T8A7 1209 aaPredicted RBP18.83■□□□□ 0.6
CLDND1-217ENST00000508071 MARCH9Q86YJ5 346 aa18.83■□□□□ 0.6
CLDND1-217ENST00000508071 RBBP8NLQ8NC74 664 aaPredicted RBP18.83■□□□□ 0.6
CLDND1-217ENST00000508071 KIAA0895Q8NCT3 520 aa18.83■□□□□ 0.6
CLDND1-217ENST00000508071 ENGASEQ8NFI3 743 aa18.83■□□□□ 0.6
CLDND1-217ENST00000508071 LHX5Q9H2C1 402 aa18.83■□□□□ 0.6
CLDND1-217ENST00000508071 KCTD10Q9H3F6 313 aa18.83■□□□□ 0.6
CLDND1-217ENST00000508071 C6orf106Q9H6K1 298 aaPredicted RBP18.83■□□□□ 0.6
CLDND1-217ENST00000508071 APOBEC3GQ9HC16 384 aaKnown RBP18.83■□□□□ 0.6
CLDND1-217ENST00000508071 BTBD3Q9Y2F9 522 aa18.83■□□□□ 0.6
CLDND1-217ENST00000508071 ANKRD6Q9Y2G4 727 aa18.83■□□□□ 0.6
CLDND1-217ENST00000508071 SNX11Q9Y5W9 270 aa18.83■□□□□ 0.6
CLDND1-217ENST00000508071 SLC12A8A0AV02 714 aa18.82■□□□□ 0.6
CLDND1-217ENST00000508071 TRABD2BA6NFA1 517 aa18.82■□□□□ 0.6
CLDND1-217ENST00000508071 TNFSF14O43557 240 aa18.82■□□□□ 0.6
CLDND1-217ENST00000508071 KLRC4O43908 158 aa18.82■□□□□ 0.6
CLDND1-217ENST00000508071 HLA-EP13747 358 aa18.82■□□□□ 0.6
CLDND1-217ENST00000508071 FNDC3BQ53EP0 1204 aaKnown RBP18.82■□□□□ 0.6
CLDND1-217ENST00000508071 C1orf220Q5T0J3 134 aa18.82■□□□□ 0.6
CLDND1-217ENST00000508071 TMEM215Q68D42 235 aa18.82■□□□□ 0.6
CLDND1-217ENST00000508071 CCDC150Q8NCX0 1101 aa18.82■□□□□ 0.6
CLDND1-217ENST00000508071 NIF3L1Q9GZT8 377 aa18.82■□□□□ 0.6
CLDND1-217ENST00000508071 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.82■□□□□ 0.6
CLDND1-217ENST00000508071 BPTFQ12830 3046 aa18.82■□□□□ 0.6
CLDND1-217ENST00000508071 KNTC1P50748 2209 aa18.82■□□□□ 0.6
CLDND1-217ENST00000508071 SETXQ7Z333 2677 aaKnown RBP18.82■□□□□ 0.6
CLDND1-217ENST00000508071 HELZ2Q9BYK8 2649 aaKnown RBP18.81■□□□□ 0.6
CLDND1-217ENST00000508071 CALUO43852 315 aaPredicted RBP18.81■□□□□ 0.6
CLDND1-217ENST00000508071 ACSL1P33121 698 aa18.81■□□□□ 0.6
CLDND1-217ENST00000508071 GRK6P43250 576 aa18.81■□□□□ 0.6
CLDND1-217ENST00000508071 GRIA4P48058 902 aa18.81■□□□□ 0.6
CLDND1-217ENST00000508071 ME1P48163 572 aa18.81■□□□□ 0.6
CLDND1-217ENST00000508071 CCT8P50990 548 aa18.81■□□□□ 0.6
CLDND1-217ENST00000508071 VAMP7P51809 220 aa18.81■□□□□ 0.6
CLDND1-217ENST00000508071 CAMK2GQ13555 558 aaPredicted RBP18.81■□□□□ 0.6
CLDND1-217ENST00000508071 ZNF394Q53GI3 561 aa18.81■□□□□ 0.6
CLDND1-217ENST00000508071 CCDC157Q569K6 752 aa18.81■□□□□ 0.6
CLDND1-217ENST00000508071 RESP18Q5W5W9 173 aa18.81■□□□□ 0.6
CLDND1-217ENST00000508071 PLD4Q96BZ4 506 aa18.81■□□□□ 0.6
CLDND1-217ENST00000508071 HEXIM2Q96MH2 286 aaKnown RBP18.81■□□□□ 0.6
CLDND1-217ENST00000508071 TM9SF3Q9HD45 589 aa18.81■□□□□ 0.6
CLDND1-217ENST00000508071 OSGEPQ9NPF4 335 aa18.81■□□□□ 0.6
CLDND1-217ENST00000508071 PLA2G4CQ9UP65 541 aa18.81■□□□□ 0.6
CLDND1-217ENST00000508071 SLCO1B1Q9Y6L6 691 aa18.81■□□□□ 0.6
CLDND1-217ENST00000508071 FAM149AA5PLN7 773 aa18.8■□□□□ 0.6
CLDND1-217ENST00000508071 SEMA4FO95754 770 aa18.8■□□□□ 0.6
CLDND1-217ENST00000508071 GCLMP48507 274 aa18.8■□□□□ 0.6
CLDND1-217ENST00000508071 YWHAGP61981 247 aaKnown RBP eCLIP18.8■□□□□ 0.6
CLDND1-217ENST00000508071 KMT5BQ4FZB7 885 aa18.8■□□□□ 0.6
CLDND1-217ENST00000508071 MPPE1Q53F39 396 aa18.8■□□□□ 0.6
CLDND1-217ENST00000508071 FAM217AQ8IXS0 508 aa18.8■□□□□ 0.6
CLDND1-217ENST00000508071 PDCD7Q8N8D1 485 aaKnown RBP18.8■□□□□ 0.6
CLDND1-217ENST00000508071 TAS1R2Q8TE23 839 aa18.8■□□□□ 0.6
CLDND1-217ENST00000508071 WFIKKN2Q8TEU8 576 aa18.8■□□□□ 0.6
CLDND1-217ENST00000508071 IGSF8Q969P0 613 aa18.8■□□□□ 0.6
CLDND1-217ENST00000508071 BBC3Q96PG8 261 aaPredicted RBP18.8■□□□□ 0.6
CLDND1-217ENST00000508071 ARID3AQ99856 593 aa18.8■□□□□ 0.6
CLDND1-217ENST00000508071 UBXN6Q9BZV1 441 aa18.8■□□□□ 0.6
CLDND1-217ENST00000508071 BTBD1Q9H0C5 482 aa18.8■□□□□ 0.6
CLDND1-217ENST00000508071 SERTAD1Q9UHV2 236 aa18.8■□□□□ 0.6
CLDND1-217ENST00000508071 PCDHA7Q9UN72 937 aa18.8■□□□□ 0.6
CLDND1-217ENST00000508071 MAPK13O15264 365 aa18.79■□□□□ 0.6
CLDND1-217ENST00000508071 PCDHGA12O60330 932 aa18.79■□□□□ 0.6
CLDND1-217ENST00000508071 FSBPO95073 299 aa18.79■□□□□ 0.6
CLDND1-217ENST00000508071 SLFN14P0C7P3 912 aa18.79■□□□□ 0.6
CLDND1-217ENST00000508071 TRIM49P0CI25 452 aa18.79■□□□□ 0.6
CLDND1-217ENST00000508071 TRIM49CP0CI26 452 aa18.79■□□□□ 0.6
CLDND1-217ENST00000508071 PDIA4P13667 645 aaKnown RBP18.79■□□□□ 0.6
CLDND1-217ENST00000508071 HOXD9P28356 352 aaPredicted RBP18.79■□□□□ 0.6
CLDND1-217ENST00000508071 HARS2P49590 506 aaKnown RBP18.79■□□□□ 0.6
CLDND1-217ENST00000508071 SLC8A3P57103 927 aa18.79■□□□□ 0.6
CLDND1-217ENST00000508071 CAMK2BQ13554 666 aa18.79■□□□□ 0.6
CLDND1-217ENST00000508071 SMAD1Q15797 465 aaKnown RBP18.79■□□□□ 0.6
CLDND1-217ENST00000508071 INAVAQ3KP66 663 aa18.79■□□□□ 0.6
CLDND1-217ENST00000508071 FOXD4L6Q3SYB3 417 aaPredicted RBP18.79■□□□□ 0.6
CLDND1-217ENST00000508071 FOXD4L5Q5VV16 416 aaPredicted RBP18.79■□□□□ 0.6
CLDND1-217ENST00000508071 FOXD4L3Q6VB84 417 aaPredicted RBP18.79■□□□□ 0.6
CLDND1-217ENST00000508071 INTS8Q75QN2 995 aaKnown RBP18.79■□□□□ 0.6
CLDND1-217ENST00000508071 ADAT2Q7Z6V5 191 aaKnown RBP18.79■□□□□ 0.6
CLDND1-217ENST00000508071 SCUBE3Q8IX30 993 aa18.79■□□□□ 0.6
CLDND1-217ENST00000508071 CYB5D2Q8WUJ1 264 aa18.79■□□□□ 0.6
CLDND1-217ENST00000508071 FOXD4L4Q8WXT5 416 aaPredicted RBP18.79■□□□□ 0.6
CLDND1-217ENST00000508071 PAGE5Q96GU1 130 aa18.79■□□□□ 0.6
CLDND1-217ENST00000508071 TMEM245Q9H330 911 aa18.79■□□□□ 0.6
CLDND1-217ENST00000508071 MMRN2Q9H8L6 949 aa18.79■□□□□ 0.6
CLDND1-217ENST00000508071 FBRSQ9HAH7 460 aa18.79■□□□□ 0.6
CLDND1-217ENST00000508071 KCNK3O14649 394 aa18.78■□□□□ 0.6
CLDND1-217ENST00000508071 TSPAN3O60637 253 aa18.78■□□□□ 0.6
CLDND1-217ENST00000508071 DNTTP04053 509 aa18.78■□□□□ 0.6
CLDND1-217ENST00000508071 KRT13P13646 458 aa18.78■□□□□ 0.6
CLDND1-217ENST00000508071 CD27P26842 260 aa18.78■□□□□ 0.6
CLDND1-217ENST00000508071 HLA-FP30511 346 aa18.78■□□□□ 0.6
CLDND1-217ENST00000508071 BCAT1P54687 386 aa18.78■□□□□ 0.6
CLDND1-217ENST00000508071 ZBTB16Q05516 673 aa18.78■□□□□ 0.6
CLDND1-217ENST00000508071 PDE4CQ08493 712 aa18.78■□□□□ 0.6
CLDND1-217ENST00000508071 PTPRNQ16849 979 aa18.78■□□□□ 0.6
CLDND1-217ENST00000508071 TTC31Q49AM3 519 aaPredicted RBP18.78■□□□□ 0.6
CLDND1-217ENST00000508071 RAB41Q5JT25 222 aa18.78■□□□□ 0.6
CLDND1-217ENST00000508071 LAYNQ6UX15 382 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms