RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 TPM1P09493 284 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 ADH5P11766 374 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 CASP14P31944 242 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 GALNSP34059 522 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 NPEPPSP55786 919 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 APBA1Q02410 837 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 PPFIA1Q13136 1202 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 SUZ12Q15022 739 aaKnown RBP7.49□□□□□ -1.21
CLCN3-206ENST00000507875 PDCD2Q16342 344 aaPredicted RBP7.49□□□□□ -1.21
CLCN3-206ENST00000507875 VWA3BQ502W6 1294 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 PLA2G4FQ68DD2 849 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 LRRC55Q6ZSA7 311 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 USP37Q86T82 979 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 TLK2Q86UE8 772 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.49□□□□□ -1.21
CLCN3-206ENST00000507875 CELF5Q8N6W0 485 aaKnown RBP7.49□□□□□ -1.21
CLCN3-206ENST00000507875 LINC01465Q8N7H1 131 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 ATG16L2Q8NAA4 619 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 ANKRD49Q8WVL7 239 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 PSPC1Q8WXF1 523 aaKnown RBP7.49□□□□□ -1.21
CLCN3-206ENST00000507875 LRTOMTQ8WZ04 291 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 ZNF75CPQ92670 426 aaPredicted RBP7.49□□□□□ -1.21
CLCN3-206ENST00000507875 C1GALT1C1Q96EU7 318 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 HTATIP2Q9BUP3 242 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 POLR3FQ9H1D9 316 aaPredicted RBP7.49□□□□□ -1.21
CLCN3-206ENST00000507875 BCAS3Q9H6U6 928 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 TAB2Q9NYJ8 693 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 ARHGAP28Q9P2N2 729 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 MKL2Q9ULH7 1088 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 NRCAMQ92823 1304 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 RALGAPA2Q2PPJ7 1873 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 LGALS16A8MUM7 142 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 FAM25EA8MYX2 175 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 SCDO00767 359 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 CABYRO75952 493 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 SLU7O95391 586 aaKnown RBP7.49□□□□□ -1.21
CLCN3-206ENST00000507875 CYP1A2P05177 515 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 EPB41P11171 864 aaKnown RBP7.49□□□□□ -1.21
CLCN3-206ENST00000507875 KRT10P13645 584 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 ELNP15502 786 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 PSMC2P35998 433 aaKnown RBP7.49□□□□□ -1.21
CLCN3-206ENST00000507875 NPTX2P47972 431 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 PEX3P56589 373 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 SP4Q02446 784 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 ADAM9Q13443 819 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 KYAT1Q16773 422 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 KIZQ2M2Z5 673 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 FIGNQ5HY92 759 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 MAP3K21Q5TCX8 1036 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 JMJD6Q6NYC1 403 aaPredicted RBP7.49□□□□□ -1.21
CLCN3-206ENST00000507875 ZPBP2Q6X784 338 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 NEK10Q6ZWH5 1172 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 ZNF410Q86VK4 478 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 ZBTB8OSQ8IWT0 167 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 SYCP3Q8IZU3 236 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 CARNMT1Q8N4J0 409 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 TMEM161BQ8NDZ6 487 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 SH3RF2Q8TEC5 729 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 U2AF1L4Q8WU68 220 aaKnown RBP7.49□□□□□ -1.21
CLCN3-206ENST00000507875 RSAD2Q8WXG1 361 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 CNOT6LQ96LI5 555 aaKnown RBP7.49□□□□□ -1.21
CLCN3-206ENST00000507875 TBATAQ96M53 351 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 Q96M66 194 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 PPM1MQ96MI6 270 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 ALPK1Q96QP1 1244 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 CHST7Q9NS84 486 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 GIMAP2Q9UG22 337 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 DNAI1Q9UI46 699 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 TBX20Q9UMR3 447 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 STYXL1Q9Y6J8 313 aa7.49□□□□□ -1.21
CLCN3-206ENST00000507875 ZMYM2Q9UBW7 1377 aa7.48□□□□□ -1.21
CLCN3-206ENST00000507875 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.48□□□□□ -1.21
CLCN3-206ENST00000507875 SMIM35A0A1B0GVV1 85 aa7.48□□□□□ -1.21
CLCN3-206ENST00000507875 CCDC154A6NI56 674 aa7.48□□□□□ -1.21
CLCN3-206ENST00000507875 N4BP1O75113 896 aaKnown RBP7.48□□□□□ -1.21
CLCN3-206ENST00000507875 KRT38O76015 456 aa7.48□□□□□ -1.21
CLCN3-206ENST00000507875 PRPF6O94906 941 aaKnown RBP7.48□□□□□ -1.21
CLCN3-206ENST00000507875 SGPL1O95470 568 aa7.48□□□□□ -1.21
CLCN3-206ENST00000507875 TFRCP02786 760 aaKnown RBP7.48□□□□□ -1.21
CLCN3-206ENST00000507875 NR3C1P04150 777 aa7.48□□□□□ -1.21
CLCN3-206ENST00000507875 TSHRP16473 764 aa7.48□□□□□ -1.21
CLCN3-206ENST00000507875 NMT1P30419 496 aaKnown RBP7.48□□□□□ -1.21
CLCN3-206ENST00000507875 LSP1P33241 339 aa7.48□□□□□ -1.21
CLCN3-206ENST00000507875 MTIF2P46199 727 aaKnown RBP7.48□□□□□ -1.21
CLCN3-206ENST00000507875 AGFG1P52594 562 aaKnown RBP7.48□□□□□ -1.21
CLCN3-206ENST00000507875 POLR2FP61218 127 aaKnown RBP7.48□□□□□ -1.21
CLCN3-206ENST00000507875 PRR20EP86478 221 aa7.48□□□□□ -1.21
CLCN3-206ENST00000507875 PRR20CP86479 221 aa7.48□□□□□ -1.21
CLCN3-206ENST00000507875 PRR20DP86480 221 aa7.48□□□□□ -1.21
CLCN3-206ENST00000507875 PRR20BP86481 221 aa7.48□□□□□ -1.21
CLCN3-206ENST00000507875 PRR20AP86496 221 aa7.48□□□□□ -1.21
CLCN3-206ENST00000507875 UBXN1Q04323 297 aa7.48□□□□□ -1.21
CLCN3-206ENST00000507875 EIF2B5Q13144 721 aaKnown RBP7.48□□□□□ -1.21
CLCN3-206ENST00000507875 ASIC2Q16515 512 aa7.48□□□□□ -1.21
CLCN3-206ENST00000507875 FAM187BQ17R55 369 aa7.48□□□□□ -1.21
CLCN3-206ENST00000507875 SESTD1Q86VW0 696 aa7.48□□□□□ -1.21
CLCN3-206ENST00000507875 KRT78Q8N1N4 520 aa7.48□□□□□ -1.21
CLCN3-206ENST00000507875 PCSK9Q8NBP7 692 aaKnown RBP7.48□□□□□ -1.21
CLCN3-206ENST00000507875 ERGIC2Q96RQ1 377 aa7.48□□□□□ -1.21
CLCN3-206ENST00000507875 ZFYVE21Q9BQ24 234 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms