RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 MAGEF1Q9HAY2 307 aa17.24■□□□□ 0.35
SNF8-205ENST00000507302 NAGPAQ9UK23 515 aa17.24■□□□□ 0.35
SNF8-205ENST00000507302 ZNF462Q96JM2 2506 aa17.24■□□□□ 0.35
SNF8-205ENST00000507302 MYLKQ15746 1914 aa17.23■□□□□ 0.35
SNF8-205ENST00000507302 PVALEFA0A1B0GWK0 134 aa17.23■□□□□ 0.35
SNF8-205ENST00000507302 EIF4E1BA6NMX2 242 aaKnown RBP17.23■□□□□ 0.35
SNF8-205ENST00000507302 H0Y8X5 98 aa17.23■□□□□ 0.35
SNF8-205ENST00000507302 IKBKBO14920 756 aa17.23■□□□□ 0.35
SNF8-205ENST00000507302 DFNA5O60443 496 aa17.23■□□□□ 0.35
SNF8-205ENST00000507302 PPP6R2O75170 966 aa17.23■□□□□ 0.35
SNF8-205ENST00000507302 EPHX1P07099 455 aa17.23■□□□□ 0.35
SNF8-205ENST00000507302 CD27P26842 260 aa17.23■□□□□ 0.35
SNF8-205ENST00000507302 CORO1AP31146 461 aaKnown RBP17.23■□□□□ 0.35
SNF8-205ENST00000507302 ABCG1P45844 678 aa17.23■□□□□ 0.35
SNF8-205ENST00000507302 CCT8P50990 548 aa17.23■□□□□ 0.35
SNF8-205ENST00000507302 C19orf57Q0VDD7 668 aa17.23■□□□□ 0.35
SNF8-205ENST00000507302 SV2AQ7L0J3 742 aa17.23■□□□□ 0.35
SNF8-205ENST00000507302 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.23■□□□□ 0.35
SNF8-205ENST00000507302 IQUBQ8NA54 791 aa17.23■□□□□ 0.35
SNF8-205ENST00000507302 SORCS1Q8WY21 1168 aa17.23■□□□□ 0.35
SNF8-205ENST00000507302 DUSP16Q9BY84 665 aa17.23■□□□□ 0.35
SNF8-205ENST00000507302 LHX5Q9H2C1 402 aa17.23■□□□□ 0.35
SNF8-205ENST00000507302 STOML2Q9UJZ1 356 aa17.23■□□□□ 0.35
SNF8-205ENST00000507302 MTMR6Q9Y217 621 aa17.23■□□□□ 0.35
SNF8-205ENST00000507302 MAST4O15021 2626 aa17.23■□□□□ 0.35
SNF8-205ENST00000507302 MGAQ8IWI9 3026 aa17.22■□□□□ 0.35
SNF8-205ENST00000507302 ZIC2O95409 532 aaPredicted RBP17.22■□□□□ 0.35
SNF8-205ENST00000507302 RALAP11233 206 aa17.22■□□□□ 0.35
SNF8-205ENST00000507302 CDK4P11802 303 aa17.22■□□□□ 0.35
SNF8-205ENST00000507302 HLA-EP13747 358 aa17.22■□□□□ 0.35
SNF8-205ENST00000507302 HOXD9P28356 352 aaPredicted RBP17.22■□□□□ 0.35
SNF8-205ENST00000507302 EIF2S3P41091 472 aaKnown RBP17.22■□□□□ 0.35
SNF8-205ENST00000507302 MCCD1P59942 119 aaPredicted RBP17.22■□□□□ 0.35
SNF8-205ENST00000507302 RAB41Q5JT25 222 aa17.22■□□□□ 0.35
SNF8-205ENST00000507302 SPOPLQ6IQ16 392 aa17.22■□□□□ 0.35
SNF8-205ENST00000507302 SHC4Q6S5L8 630 aa17.22■□□□□ 0.35
SNF8-205ENST00000507302 DHRS13Q6UX07 377 aa17.22■□□□□ 0.35
SNF8-205ENST00000507302 SERPINA13PQ6UXR4 307 aa17.22■□□□□ 0.35
SNF8-205ENST00000507302 ENGASEQ8NFI3 743 aa17.22■□□□□ 0.35
SNF8-205ENST00000507302 NT5C1AQ9BXI3 368 aa17.22■□□□□ 0.35
SNF8-205ENST00000507302 UBXN6Q9BZV1 441 aa17.22■□□□□ 0.35
SNF8-205ENST00000507302 ZSCAN16Q9H4T2 348 aaPredicted RBP17.22■□□□□ 0.35
SNF8-205ENST00000507302 CYP3A43Q9HB55 503 aa17.22■□□□□ 0.35
SNF8-205ENST00000507302 SLC39A2Q9NP94 309 aa17.22■□□□□ 0.35
SNF8-205ENST00000507302 ATMQ13315 3056 aa17.22■□□□□ 0.35
SNF8-205ENST00000507302 A0A1B0GTQ1 180 aa17.21■□□□□ 0.35
SNF8-205ENST00000507302 SEMA4FO95754 770 aa17.21■□□□□ 0.35
SNF8-205ENST00000507302 CYBBP04839 570 aa17.21■□□□□ 0.35
SNF8-205ENST00000507302 IGHV4-34P06331 123 aa17.21■□□□□ 0.35
SNF8-205ENST00000507302 C1SP09871 688 aa17.21■□□□□ 0.35
SNF8-205ENST00000507302 HLA-FP30511 346 aa17.21■□□□□ 0.35
SNF8-205ENST00000507302 RPS14P62263 151 aaKnown RBP17.21■□□□□ 0.35
SNF8-205ENST00000507302 RTP5Q14D33 572 aa17.21■□□□□ 0.35
SNF8-205ENST00000507302 TRIP4Q15650 581 aaPredicted RBP17.21■□□□□ 0.35
SNF8-205ENST00000507302 ADIPOR2Q86V24 386 aa17.21■□□□□ 0.35
SNF8-205ENST00000507302 FAM124AQ86V42 546 aa17.21■□□□□ 0.35
SNF8-205ENST00000507302 DENND1CQ8IV53 801 aa17.21■□□□□ 0.35
SNF8-205ENST00000507302 SLC39A7Q92504 469 aa17.21■□□□□ 0.35
SNF8-205ENST00000507302 DHX58Q96C10 678 aa17.21■□□□□ 0.35
SNF8-205ENST00000507302 BTBD1Q9H0C5 482 aa17.21■□□□□ 0.35
SNF8-205ENST00000507302 KCTD10Q9H3F6 313 aa17.21■□□□□ 0.35
SNF8-205ENST00000507302 SGK2Q9HBY8 427 aa17.21■□□□□ 0.35
SNF8-205ENST00000507302 ARID1BQ8NFD5 2236 aaPredicted RBP17.2■□□□□ 0.34
SNF8-205ENST00000507302 GOLGA8CPA6NN73 597 aa17.2■□□□□ 0.34
SNF8-205ENST00000507302 PLK4O00444 970 aa17.2■□□□□ 0.34
SNF8-205ENST00000507302 KCNK3O14649 394 aa17.2■□□□□ 0.34
SNF8-205ENST00000507302 VILLO15195 856 aa17.2■□□□□ 0.34
SNF8-205ENST00000507302 SPTLC2O15270 562 aa17.2■□□□□ 0.34
SNF8-205ENST00000507302 TLX3O43711 291 aaPredicted RBP17.2■□□□□ 0.34
SNF8-205ENST00000507302 PRB1P04280 392 aa17.2■□□□□ 0.34
SNF8-205ENST00000507302 TRIM21P19474 475 aaKnown RBP17.2■□□□□ 0.34
SNF8-205ENST00000507302 ITPKBP27987 946 aa17.2■□□□□ 0.34
SNF8-205ENST00000507302 CASP1P29466 404 aa17.2■□□□□ 0.34
SNF8-205ENST00000507302 EFEMP1Q12805 493 aa17.2■□□□□ 0.34
SNF8-205ENST00000507302 PPP1R26Q5T8A7 1209 aaPredicted RBP17.2■□□□□ 0.34
SNF8-205ENST00000507302 BHLHA9Q7RTU4 235 aa17.2■□□□□ 0.34
SNF8-205ENST00000507302 ZC3H3Q8IXZ2 948 aaKnown RBP17.2■□□□□ 0.34
SNF8-205ENST00000507302 WFIKKN2Q8TEU8 576 aa17.2■□□□□ 0.34
SNF8-205ENST00000507302 JAKMIP2Q96AA8 810 aa17.2■□□□□ 0.34
SNF8-205ENST00000507302 PLD4Q96BZ4 506 aa17.2■□□□□ 0.34
SNF8-205ENST00000507302 NXPE2Q96DL1 559 aa17.2■□□□□ 0.34
SNF8-205ENST00000507302 CIPCQ9C0C6 399 aa17.2■□□□□ 0.34
SNF8-205ENST00000507302 APOBEC3GQ9HC16 384 aaKnown RBP17.2■□□□□ 0.34
SNF8-205ENST00000507302 PRSS16Q9NQE7 514 aa17.2■□□□□ 0.34
SNF8-205ENST00000507302 MARCH2Q9P0N8 246 aa17.2■□□□□ 0.34
SNF8-205ENST00000507302 FTSJ1Q9UET6 329 aa17.2■□□□□ 0.34
SNF8-205ENST00000507302 RASAL2Q9UJF2 1139 aa17.2■□□□□ 0.34
SNF8-205ENST00000507302 MAPK13O15264 365 aa17.19■□□□□ 0.34
SNF8-205ENST00000507302 KLRC4O43908 158 aa17.19■□□□□ 0.34
SNF8-205ENST00000507302 HLA-DRAP01903 254 aa17.19■□□□□ 0.34
SNF8-205ENST00000507302 ZNF445P59923 1031 aa17.19■□□□□ 0.34
SNF8-205ENST00000507302 RACK1P63244 317 aaKnown RBP17.19■□□□□ 0.34
SNF8-205ENST00000507302 SHBQ15464 509 aa17.19■□□□□ 0.34
SNF8-205ENST00000507302 INAVAQ3KP66 663 aa17.19■□□□□ 0.34
SNF8-205ENST00000507302 MPPE1Q53F39 396 aa17.19■□□□□ 0.34
SNF8-205ENST00000507302 PM20D1Q6GTS8 502 aa17.19■□□□□ 0.34
SNF8-205ENST00000507302 LAYNQ6UX15 382 aa17.19■□□□□ 0.34
SNF8-205ENST00000507302 USP30Q70CQ3 517 aa17.19■□□□□ 0.34
SNF8-205ENST00000507302 CACUL1Q86Y37 369 aa17.19■□□□□ 0.34
SNF8-205ENST00000507302 CACTIN-AS1Q8N1I8 211 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms