RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 ANKS1BQ7Z6G8 1248 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 TMEM110Q86TL2 294 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 CHPFQ8IZ52 775 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 IPO4Q8TEX9 1081 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 HMGB4Q8WW32 186 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 RLN3Q8WXF3 142 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 AZIN2Q96A70 460 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 IRX2Q9BZI1 471 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 VPS45Q9NRW7 570 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 RXFP3Q9NSD7 469 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 CACNA2D2Q9NY47 1150 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 THAP10Q9P2Z0 257 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 MBD1Q9UIS9 605 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 AJAP1Q9UKB5 411 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 TNRC6BQ9UPQ9 1833 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 GON4LQ3T8J9 2241 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 MUC22E2RYF6 1773 aaPredicted RBP9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 CKAP5Q14008 2032 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 MED19A0JLT2 244 aaPredicted RBP9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 WASH3PC4AMC7 463 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 E5RJQ4 531 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 THAP12O43422 761 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 MED7O43513 233 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 CYBBP04839 570 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 C7P10643 843 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 NDUFV2P19404 249 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 HLA-FP30511 346 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 MTIF2P46199 727 aaKnown RBP9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 SGSHP51688 502 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 EIF4HQ15056 248 aaKnown RBP9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 ARHGAP44Q17R89 818 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 MPPE1Q53F39 396 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 FAM133BQ5BKY9 247 aaKnown RBP9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 SPDYCQ5MJ68 293 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 NUGGCQ68CJ6 796 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 RBM43Q6ZSC3 357 aaKnown RBP9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 KIAA0907Q7Z7F0 614 aaPredicted RBP9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 FAM114A1Q8IWE2 563 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 UNC45BQ8IWX7 931 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 SCUBE3Q8IX30 993 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 FRMD1Q8N878 549 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 DQX1Q8TE96 717 aaKnown RBP9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 DDI1Q8WTU0 396 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 SLC39A13Q96H72 371 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 FCRL2Q96LA5 508 aaPredicted RBP9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 MIS12Q9H081 205 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 NDST4Q9H3R1 872 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 SMOC1Q9H4F8 434 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 CALCOCO1Q9P1Z2 691 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 BCCIPQ9P287 314 aaKnown RBP eCLIP9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 DACH1Q9UI36 760 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 PCDHGC3Q9UN70 934 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 STON1Q9Y6Q2 735 aa9.45□□□□□ -0.9
PDLIM5-209ENST00000506632 IGHV1OR15-9A0A0B4J2B8 117 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 DCDC2BA2VCK2 349 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 TM4SF5O14894 197 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 ACSL4O60488 711 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 TSPAN3O60637 253 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 CAVIN2O95810 425 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 IGLV3-25P01717 112 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 NCAM1P13591 858 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 SLC6A4P31645 630 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 CLCN1P35523 988 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 IL12RB1P42701 662 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 TBX4P57082 545 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 CREB5Q02930 508 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 KCNMA1Q12791 1236 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 PDCLQ13371 301 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 EIF4EBP2Q13542 120 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 BYSLQ13895 437 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 TPD52L1Q16890 204 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 AASDHQ4L235 1098 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 VWA3BQ502W6 1294 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 MPP7Q5T2T1 576 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 PIK3R6Q5UE93 754 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 SYPL2Q5VXT5 272 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 PEAR1Q5VY43 1037 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 NADSYN1Q6IA69 706 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 TCEAL6Q6IPX3 200 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 SDE2Q6IQ49 451 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 LPCAT2Q7L5N7 544 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 METTL3Q86U44 580 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 TAC4Q86UU9 113 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 CREBRFQ8IUR6 639 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 WDTC1Q8N5D0 677 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 C12orf50Q8NA57 414 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 WFIKKN2Q8TEU8 576 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 UCMAQ8WVF2 138 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 GOLGA1Q92805 767 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 TCEAL3Q969E4 200 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 FAM149B1Q96BN6 582 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 TMA16Q96EY4 203 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 LMLNQ96KR4 655 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 SPACA7Q96KW9 195 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 MRGPRX1Q96LB2 322 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 SERPINB11Q96P15 392 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 TUBGCP2Q9BSJ2 902 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 LHX5Q9H2C1 402 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms