RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 NMUR1Q9HB89 426 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 OSER1Q9NX31 292 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 SEPT10Q9P0V9 454 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 RABGEF1Q9UJ41 708 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 A0A1W2PPM1 405 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 KBTBD13C9JR72 458 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 KCNK1O00180 336 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 EEF2KO00418 725 aaKnown RBP12.61□□□□□ -0.39
LIN54-206ENST00000506560 SPAG7O75391 227 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 DGKIO75912 1065 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 ERCC2P18074 760 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 MAP2K2P36507 400 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 STAT4Q14765 748 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 PCGF5Q86SE9 256 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 DQX1Q8TE96 717 aaKnown RBP12.61□□□□□ -0.39
LIN54-206ENST00000506560 ZNF473Q8WTR7 871 aaKnown RBP12.61□□□□□ -0.39
LIN54-206ENST00000506560 QKIQ96PU8 341 aaKnown RBP eCLIP12.61□□□□□ -0.393e-6■□□□□ 10.1
LIN54-206ENST00000506560 FOXP3Q9BZS1 431 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 KCNK9Q9NPC2 374 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 FBXW11Q9UKB1 542 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 VGLL3A8MV65 326 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 DCLK1O15075 740 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 TCEA3O75764 348 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 EOMESO95936 686 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 ABHD2P08910 425 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 SKIP12755 728 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 ARPP19P56211 112 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 USP46P62068 366 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 TSPY1Q01534 308 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 AP1B1Q10567 949 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 SEMA3BQ13214 749 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 EFHC2Q5JST6 749 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 PM20D1Q6GTS8 502 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 RSPO2Q6UXX9 243 aaPredicted RBP12.6□□□□□ -0.39
LIN54-206ENST00000506560 SCD5Q86SK9 330 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 PRPF39Q86UA1 669 aaKnown RBP12.6□□□□□ -0.39
LIN54-206ENST00000506560 VSIG1Q86XK7 387 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 SPATA2LQ8IUW3 424 aaPredicted RBP12.6□□□□□ -0.39
LIN54-206ENST00000506560 REM2Q8IYK8 340 aaPredicted RBP12.6□□□□□ -0.39
LIN54-206ENST00000506560 PDIK1LQ8N165 341 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 PPP1R12CQ9BZL4 782 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 PAK5Q9P286 719 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 PCDHB8Q9UN66 801 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 RRP15Q9Y3B9 282 aaKnown RBP12.6□□□□□ -0.39
LIN54-206ENST00000506560 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.6□□□□□ -0.39
LIN54-206ENST00000506560 TNFRSF10BO14763 440 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 CDH16O75309 829 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 BRAFP15056 766 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 CRADDP78560 199 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 SRLQ86TD4 932 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 C4orf33Q8N1A6 199 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 THEM5Q8N1Q8 247 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 CCNYQ8ND76 341 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 GDAP1Q8TB36 358 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 CFAP36Q96G28 342 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 P2RY11Q96G91 374 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 UROC1Q96N76 676 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 CRISPLD1Q9H336 500 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 C12orf65Q9H3J6 166 aaKnown RBP12.6□□□□□ -0.39
LIN54-206ENST00000506560 INTS9Q9NV88 658 aaKnown RBP12.6□□□□□ -0.39
LIN54-206ENST00000506560 LGALS13Q9UHV8 139 aa12.6□□□□□ -0.39
LIN54-206ENST00000506560 MYO16Q9Y6X6 1858 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.59□□□□□ -0.39
LIN54-206ENST00000506560 RASA4BC9J798 803 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 RASA4O43374 803 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 TYMPP19971 482 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 VARS2Q5ST30 1063 aaKnown RBP12.59□□□□□ -0.39
LIN54-206ENST00000506560 FAM171A1Q5VUB5 890 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 HEATR6Q6AI08 1181 aaKnown RBP12.59□□□□□ -0.39
LIN54-206ENST00000506560 TAS1R1Q7RTX1 841 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 CDKL3Q8IVW4 592 aaPredicted RBP12.59□□□□□ -0.39
LIN54-206ENST00000506560 BCL7CQ8WUZ0 217 aaPredicted RBP12.59□□□□□ -0.39
LIN54-206ENST00000506560 HTR3CQ8WXA8 447 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 CASP10Q92851 521 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 CELF6Q96J87 481 aaKnown RBP12.59□□□□□ -0.39
LIN54-206ENST00000506560 CASD1Q96PB1 797 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 KLF6Q99612 283 aaPredicted RBP12.59□□□□□ -0.39
LIN54-206ENST00000506560 NCAPGQ9BPX3 1015 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 SIK2Q9H0K1 926 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 WDCPQ9H6R7 721 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 MARCH5Q9NX47 278 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 DSEQ9UL01 958 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 TEX264Q9Y6I9 313 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 GMNCA6NCL1 334 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 ZNF487B1APH4 448 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 H3BRJ5 948 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 CHADO15335 359 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 TADA2AO75478 443 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 FAM155BO75949 473 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 LRIG2O94898 1065 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 PLEKHG4Q58EX7 1191 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 ANKRD20A2Q5SQ80 823 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 ANKRD20A1Q5TYW2 823 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 ANKRD20A3Q5VUR7 823 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 TMCO2Q7Z6W1 182 aaPredicted RBP12.59□□□□□ -0.39
LIN54-206ENST00000506560 DEFB128Q7Z7B8 93 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 PALM2Q8IXS6 379 aa12.59□□□□□ -0.39
LIN54-206ENST00000506560 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.59□□□□□ -0.39
LIN54-206ENST00000506560 ZNF784Q8NCA9 323 aaPredicted RBP12.59□□□□□ -0.39
LIN54-206ENST00000506560 URGCPQ8TCY9 931 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms