RNA–Protein interactions for RNA: ENST00000505980.5

SSBP2-205, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene SSBP2, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-205ENST00000505980 SMARCB1Q12824 385 aa9.36□□□□□ -0.91
SSBP2-205ENST00000505980 EIF4EBP2Q13542 120 aaPredicted RBP9.36□□□□□ -0.91
SSBP2-205ENST00000505980 BYSLQ13895 437 aaKnown RBP9.36□□□□□ -0.91
SSBP2-205ENST00000505980 ANKRD20A8PQ5CZ79 823 aa9.36□□□□□ -0.91
SSBP2-205ENST00000505980 BSPRYQ5W0U4 402 aa9.36□□□□□ -0.91
SSBP2-205ENST00000505980 SLC9A4Q6AI14 798 aa9.36□□□□□ -0.91
SSBP2-205ENST00000505980 KCNT2Q6UVM3 1135 aa9.36□□□□□ -0.91
SSBP2-205ENST00000505980 ZDHHC24Q6UX98 284 aa9.36□□□□□ -0.91
SSBP2-205ENST00000505980 C16orf59Q7L2K0 433 aa9.36□□□□□ -0.91
SSBP2-205ENST00000505980 TMCO2Q7Z6W1 182 aaPredicted RBP9.36□□□□□ -0.91
SSBP2-205ENST00000505980 MAP7D3Q8IWC1 876 aa9.36□□□□□ -0.91
SSBP2-205ENST00000505980 CMTR2Q8IYT2 770 aaKnown RBP9.36□□□□□ -0.91
SSBP2-205ENST00000505980 MREGQ8N565 214 aa9.36□□□□□ -0.91
SSBP2-205ENST00000505980 PQLC3Q8N755 202 aa9.36□□□□□ -0.91
SSBP2-205ENST00000505980 SLC9A7Q96T83 725 aa9.36□□□□□ -0.91
SSBP2-205ENST00000505980 CALN1Q9BXU9 219 aa9.36□□□□□ -0.91
SSBP2-205ENST00000505980 DPH5Q9H2P9 285 aa9.36□□□□□ -0.91
SSBP2-205ENST00000505980 VIPAS39Q9H9C1 493 aa9.36□□□□□ -0.91
SSBP2-205ENST00000505980 WDR6Q9NNW5 1121 aaKnown RBP9.36□□□□□ -0.91
SSBP2-205ENST00000505980 IL23AQ9NPF7 189 aa9.36□□□□□ -0.91
SSBP2-205ENST00000505980 PIGVQ9NUD9 493 aa9.36□□□□□ -0.91
SSBP2-205ENST00000505980 MTRRQ9UBK8 725 aa9.36□□□□□ -0.91
SSBP2-205ENST00000505980 AP4E1Q9UPM8 1137 aa9.36□□□□□ -0.91
SSBP2-205ENST00000505980 GREB1Q4ZG55 1949 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 FAM92AA1XBS5 289 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 MTMR11A4FU01 709 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 ERICH4A6NGS2 130 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 CAPN9O14815 690 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 TP73O15350 636 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 CPP00450 1065 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 IGLV3-25P01717 112 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 ITGAVP06756 1048 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 IVLP07476 585 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 NCAM1P13591 858 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 EN2P19622 333 aaPredicted RBP9.35□□□□□ -0.91
SSBP2-205ENST00000505980 KLRC2P26717 231 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 GBP1P32455 592 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 GPR15P49685 360 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 AIF1P55008 147 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 OTUD4Q01804 1114 aaKnown RBP9.35□□□□□ -0.91
SSBP2-205ENST00000505980 LMNB2Q03252 620 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 DEUP1Q05D60 604 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 SCAPQ12770 1279 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 TFDP2Q14188 446 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 KRT81Q14533 505 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 RBBP5Q15291 538 aaKnown RBP9.35□□□□□ -0.91
SSBP2-205ENST00000505980 USP41Q3LFD5 358 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 SLC8B1Q6J4K2 584 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 PRSS55Q6UWB4 352 aaPredicted RBP9.35□□□□□ -0.91
SSBP2-205ENST00000505980 SND1Q7KZF4 910 aaKnown RBP eCLIP9.35□□□□□ -0.91
SSBP2-205ENST00000505980 SCD5Q86SK9 330 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 FAM131BQ86XD5 332 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 RFX6Q8HWS3 928 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 NUP93Q8N1F7 819 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 SLC39A11Q8N1S5 342 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 ALLCQ8N6M5 410 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 TTC9BQ8N6N2 239 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 PLD5Q8N7P1 536 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 ATAD1Q8NBU5 361 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 PCDH19Q8TAB3 1148 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 SLC7A14Q8TBB6 771 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 ACTL9Q8TC94 416 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 SPPL2BQ8TCT7 592 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 C2orf15Q8WU43 125 aaKnown RBP9.35□□□□□ -0.91
SSBP2-205ENST00000505980 PIK3R5Q8WYR1 880 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 NTAN1Q96AB6 310 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 GDAP1L1Q96MZ0 367 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 PGLYRP2Q96PD5 576 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 KCTD15Q96SI1 283 aaPredicted RBP9.35□□□□□ -0.91
SSBP2-205ENST00000505980 TRIM62Q9BVG3 475 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 MAGEB5Q9BZ81 275 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 FAM129AQ9BZQ8 928 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 TRIM31Q9BZY9 425 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 SLC6A16Q9GZN6 736 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 MCOLN1Q9GZU1 580 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 CRISPLD1Q9H336 500 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 CPSF2Q9P2I0 782 aaKnown RBP9.35□□□□□ -0.91
SSBP2-205ENST00000505980 SAE1Q9UBE0 346 aaPredicted RBP9.35□□□□□ -0.91
SSBP2-205ENST00000505980 SCML2Q9UQR0 700 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 SNX24Q9Y343 169 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 BACE2Q9Y5Z0 518 aa9.35□□□□□ -0.91
SSBP2-205ENST00000505980 MRPL42Q9Y6G3 142 aaKnown RBP9.35□□□□□ -0.91
SSBP2-205ENST00000505980 I6L893 689 aaPredicted RBP9.34□□□□□ -0.91
SSBP2-205ENST00000505980 ADAM12O43184 909 aa9.34□□□□□ -0.91
SSBP2-205ENST00000505980 GAS8O95995 478 aa9.34□□□□□ -0.91
SSBP2-205ENST00000505980 F9P00740 461 aa9.34□□□□□ -0.91
SSBP2-205ENST00000505980 SOD2P04179 222 aa9.34□□□□□ -0.91
SSBP2-205ENST00000505980 HAPLN1P10915 354 aaPredicted RBP9.34□□□□□ -0.91
SSBP2-205ENST00000505980 CPB1P15086 417 aa9.34□□□□□ -0.91
SSBP2-205ENST00000505980 PECAM1P16284 738 aaPredicted RBP9.34□□□□□ -0.91
SSBP2-205ENST00000505980 TGM2P21980 687 aa9.34□□□□□ -0.91
SSBP2-205ENST00000505980 HSPA9P38646 679 aaKnown RBP9.34□□□□□ -0.91
SSBP2-205ENST00000505980 CXCR3P49682 368 aa9.34□□□□□ -0.91
SSBP2-205ENST00000505980 PGFP49763 221 aa9.34□□□□□ -0.91
SSBP2-205ENST00000505980 YWHAGP61981 247 aaKnown RBP eCLIP9.34□□□□□ -0.91
SSBP2-205ENST00000505980 DYNLT1P63172 113 aa9.34□□□□□ -0.91
SSBP2-205ENST00000505980 TMED1Q13445 227 aa9.34□□□□□ -0.91
SSBP2-205ENST00000505980 HLTFQ14527 1009 aaKnown RBP eCLIP9.34□□□□□ -0.91
SSBP2-205ENST00000505980 NOMO1Q15155 1222 aa9.34□□□□□ -0.91
SSBP2-205ENST00000505980 PPP1R7Q15435 360 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms