RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 EPB41L4BQ9H329 900 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 SEMA4AQ9H3S1 761 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 WDCPQ9H6R7 721 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 CWH43Q9H720 699 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 FAM204AQ9H8W3 233 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 ROPN1Q9HAT0 212 aaPredicted RBP8.34□□□□□ -1.07
COL4A5-208ENST00000505728 USP29Q9HBJ7 922 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 PIGVQ9NUD9 493 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 DDIT4Q9NX09 232 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 ABI2Q9NYB9 513 aaPredicted RBP8.34□□□□□ -1.07
COL4A5-208ENST00000505728 PSD3Q9NYI0 1048 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 CALCOCO1Q9P1Z2 691 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 VPS18Q9P253 973 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 PAK5Q9P286 719 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 SAE1Q9UBE0 346 aaPredicted RBP8.34□□□□□ -1.07
COL4A5-208ENST00000505728 SHOC2Q9UQ13 582 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 SCML2Q9UQR0 700 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 FAM92AA1XBS5 289 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 GOLGA6CA6NDK9 693 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 A6NNZ2 444 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 ALOX15BO15296 676 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 RIPK2O43353 540 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 TTC4O95801 387 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 IGLV3-25P01717 112 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 MYZAPP0CAP1 466 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 GOLGA6DP0CG33 693 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 HAPLN1P10915 354 aaPredicted RBP8.33□□□□□ -1.08
COL4A5-208ENST00000505728 FOSL2P15408 326 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 GOT1P17174 413 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 HTR7P34969 479 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 CHKAP35790 457 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 RPL10AP62906 217 aaKnown RBP8.33□□□□□ -1.08
COL4A5-208ENST00000505728 ZNF844Q08AG5 666 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 IFFO1Q0D2I5 559 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 CBLBQ13191 982 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 SEMA3BQ13214 749 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 SLC29A2Q14542 456 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 GRIN2CQ14957 1233 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 PAFAH1B3Q15102 231 aaKnown RBP8.33□□□□□ -1.08
COL4A5-208ENST00000505728 PDK1Q15118 436 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 KCTD19Q17RG1 926 aaPredicted RBP8.33□□□□□ -1.08
COL4A5-208ENST00000505728 USP41Q3LFD5 358 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 TUBB8Q3ZCM7 444 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 SLC45A4Q5BKX6 768 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 C6orf118Q5T5N4 469 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 EMC10Q5UCC4 262 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 NCBP2-AS2Q69YL0 99 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 MSANTD2Q6P1R3 559 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 PPP1R21Q6ZMI0 780 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 SCD5Q86SK9 330 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 PRUNE1Q86TP1 453 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 TAC4Q86UU9 113 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 ZC3H18Q86VM9 953 aaKnown RBP8.33□□□□□ -1.08
COL4A5-208ENST00000505728 CCDC25Q86WR0 208 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 RNF168Q8IYW5 571 aaPredicted RBP8.33□□□□□ -1.08
COL4A5-208ENST00000505728 PYROXD2Q8N2H3 581 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 FAM71DQ8N9W8 422 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 FAM76AQ8TAV0 307 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 DQX1Q8TE96 717 aaKnown RBP8.33□□□□□ -1.08
COL4A5-208ENST00000505728 CPT1BQ92523 772 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 EDEM1Q92611 657 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 EXOC4Q96A65 974 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 ARL8AQ96BM9 186 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 ZNF689Q96CS4 500 aaPredicted RBP8.33□□□□□ -1.08
COL4A5-208ENST00000505728 VWCEQ96DN2 955 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 ATP6V1G3Q96LB4 118 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 TTC25Q96NG3 672 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 HAPLN3Q96S86 360 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 FERMT1Q9BQL6 677 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 CCDC77Q9BR77 488 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 FRMD8Q9BZ67 464 aaPredicted RBP8.33□□□□□ -1.08
COL4A5-208ENST00000505728 BRD8Q9H0E9 1235 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 SMOC2Q9H3U7 446 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 ARHGEF4Q9NR80 690 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 ARHGEF38Q9NXL2 777 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 GOLGA6AQ9NYA3 693 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 ADAM21Q9UKJ8 722 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 FARP1Q9Y4F1 1045 aaPredicted RBP8.33□□□□□ -1.08
COL4A5-208ENST00000505728 HEY1Q9Y5J3 304 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 BACE2Q9Y5Z0 518 aa8.33□□□□□ -1.08
COL4A5-208ENST00000505728 COL4A4P53420 1690 aaPredicted RBP8.33□□□□□ -1.08
COL4A5-208ENST00000505728 SYNJ2BP-COX16A0A087WUM0 186 aa8.32□□□□□ -1.08
COL4A5-208ENST00000505728 MTMR11A4FU01 709 aa8.32□□□□□ -1.08
COL4A5-208ENST00000505728 C5orf60A6NFR6 353 aa8.32□□□□□ -1.08
COL4A5-208ENST00000505728 GRXCR1A8MXD5 290 aa8.32□□□□□ -1.08
COL4A5-208ENST00000505728 NT5C1B-RDH14C9J2C7 533 aa8.32□□□□□ -1.08
COL4A5-208ENST00000505728 DCLK1O15075 740 aa8.32□□□□□ -1.08
COL4A5-208ENST00000505728 KCNN4O15554 427 aa8.32□□□□□ -1.08
COL4A5-208ENST00000505728 IRAK2O43187 625 aa8.32□□□□□ -1.08
COL4A5-208ENST00000505728 CREB3O43889 395 aa8.32□□□□□ -1.08
COL4A5-208ENST00000505728 GCATO75600 419 aa8.32□□□□□ -1.08
COL4A5-208ENST00000505728 TCEA3O75764 348 aa8.32□□□□□ -1.08
COL4A5-208ENST00000505728 UPP2O95045 317 aa8.32□□□□□ -1.08
COL4A5-208ENST00000505728 ABHD2P08910 425 aa8.32□□□□□ -1.08
COL4A5-208ENST00000505728 CPB1P15086 417 aa8.32□□□□□ -1.08
COL4A5-208ENST00000505728 CSF2RAP15509 400 aa8.32□□□□□ -1.08
COL4A5-208ENST00000505728 ERCC2P18074 760 aa8.32□□□□□ -1.08
COL4A5-208ENST00000505728 DNAJB2P25686 324 aa8.32□□□□□ -1.08
COL4A5-208ENST00000505728 YWHAQP27348 245 aa8.32□□□□□ -1.08
COL4A5-208ENST00000505728 RBL1P28749 1068 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms